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ModBase: Database of Comparative Protein Structure Models

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Sequence Information

Primary Database Link P37024.3
Original Database ID ref NP_414690.4
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation hrpb_ecoli recname: full=atp-dependent
rna helicase hrpb
Sequence Length 809

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region4-590
Protein Length809
Template PDB Code5d0uA
Template Region96-723
Sequence Identity23%
E-Value0.00000062
GA3411
MPQS0.919387
z-DOPE0.56
TSVMod MethodMSALL
TSVMod RMSD7.271
TSVMod NO350.609
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB5d0u
DBALI5d0uA 
JenaImageLibrary5d0u 
Target Sequence
UniProtKBA0A0G3HM60SubName: Full=Putative ATP-dependent helicase protein {ECO:0000313|EMBL:AKK13850.1};
InterProA0A0G3HM60 
PFAMA0A0G3HM60 
ProdomA0A0G3HM60 
UniProtKBI0ZN89SubName: Full=Putative ATP-dependent helicase;
InterProI0ZN89 
PFAMI0ZN89 
ProdomI0ZN89 
UniProtKBH0Q6X8SubName: Full=Predicted ATP-dependent helicase;
InterProH0Q6X8 
PFAMH0Q6X8 
ProdomH0Q6X8 
UniProtKBG2F108SubName: Full=ATP-dependent RNA helicase HrpB;
InterProG2F108 
PFAMG2F108 
ProdomG2F108 
UniProtKBF9QX31SubName: Full=ATP-dependent RNA helicase HrpB;
InterProF9QX31 
PFAMF9QX31 
ProdomF9QX31 
UniProtKBC4ZRP1SubName: Full=Predicted ATP-dependent helicase;
InterProC4ZRP1 
PFAMC4ZRP1 
ProdomC4ZRP1 
UniProtKBB1XCC3SubName: Full=Predicted ATP-dependent helicase;
InterProB1XCC3 
PFAMB1XCC3 
ProdomB1XCC3 
UniProtKBA0A069Z0J8SubName: Full=ATP-dependent helicase HrpB {ECO:0000313|EMBL:KDU52954.1};EC=3.6.4.- {ECO:0000313|EMBL:KDU52954.1};
InterProA0A069Z0J8 
PFAMA0A069Z0J8 
ProdomA0A069Z0J8 
UniProtKBA0A069XNS2SubName: Full=ATP-dependent helicase HrpB {ECO:0000313|EMBL:KDU31607.1};EC=3.6.4.- {ECO:0000313|EMBL:KDU31607.1};
InterProA0A069XNS2 
PFAMA0A069XNS2 
ProdomA0A069XNS2 
UniProtKBM2NC07SubName: Full=ATP-dependent RNA helicase HrpB;
InterProM2NC07 
PFAMM2NC07 
ProdomM2NC07 
UniProtKBP75663RecName: Full=ATP-dependent RNA helicase HrpB;EC=3.6.4.13;
InterProP75663 
PFAMP75663 
ProdomP75663 
UniProtKBQ2MCG2RecName: Full=ATP-dependent RNA helicase HrpB;EC=3.6.4.13;
InterProQ2MCG2 
PFAMQ2MCG2 
ProdomQ2MCG2 
UniProtKBP37024RecName: Full=ATP-dependent RNA helicase HrpB;EC=3.6.4.13;
InterProP37024 
PFAMP37024 
ProdomP37024 
UniProtKBA0A8F9H9U1SubName: Full=ATP-dependent helicase HrpB {ECO:0000313|EMBL:QYE24986.1}EC=3.6.4.13 {ECO:0000313|EMBL:QYE24986.1}
InterProA0A8F9H9U1 
PFAMA0A8F9H9U1 
ProdomA0A8F9H9U1 
UniProtKBA0A8F8DEW1SubName: Full=ATP-dependent helicase HrpB {ECO:0000313|EMBL:QXZ36209.1}EC=3.6.4.13 {ECO:0000313|EMBL:QXZ36209.1}
InterProA0A8F8DEW1 
PFAMA0A8F8DEW1 
ProdomA0A8F8DEW1 
UniProtKBA0A8F7SFC0SubName: Full=ATP-dependent helicase HrpB {ECO:0000313|EMBL:QXW76921.1}EC=3.6.4.13 {ECO:0000313|EMBL:QXW76921.1}
InterProA0A8F7SFC0 
PFAMA0A8F7SFC0 
ProdomA0A8F7SFC0 
UniProtKBA0A6M6NZH4SubName: Full=ATP-dependent helicase HrpB {ECO:0000313|EMBL:QJZ02738.1}EC=3.6.4.13 {ECO:0000313|EMBL:QJZ02738.1}
InterProA0A6M6NZH4 
PFAMA0A6M6NZH4 
ProdomA0A6M6NZH4 
UniProtKBB1XCC3SubName: Full=Predicted ATP-dependent helicase;
InterProB1XCC3 
PFAMB1XCC3 
ProdomB1XCC3 
UniProtKBA0A5Q3TIF5SubName: Full=ATP-dependent RNA helicase HrpB {ECO:0000313|EMBL:QGL43660.1}
InterProA0A5Q3TIF5 
PFAMA0A5Q3TIF5 
ProdomA0A5Q3TIF5 
UniProtKBQ2MCG2Predicted ATP-dependent helicase
InterProQ2MCG2 
PFAMQ2MCG2 
ProdomQ2MCG2 
UniProtKBC4ZRP1SubName: Full=Predicted ATP-dependent helicase;
InterProC4ZRP1 
PFAMC4ZRP1 
ProdomC4ZRP1 
UniProtKBF9QX31SubName: Full=ATP-dependent RNA helicase HrpB;
InterProF9QX31 
PFAMF9QX31 
ProdomF9QX31 
UniProtKBG2F108SubName: Full=ATP-dependent RNA helicase HrpB;
InterProG2F108 
PFAMG2F108 
ProdomG2F108 
UniProtKBA0A2S5ZR36SubName: Full=ATP-dependent RNA helicase HrpB {ECO:0000313|EMBL:EAC1714624.1}SubName: Full=ATP-dependent helicase HrpB {ECO:0000313|EMBL:SVF42488.1}EC=3.6.1.- {ECO:0000313|EMBL:SVF42488.1}
InterProA0A2S5ZR36 
PFAMA0A2S5ZR36 
ProdomA0A2S5ZR36 
UniProtKBI0ZN89SubName: Full=Putative ATP-dependent helicase;
InterProI0ZN89 
PFAMI0ZN89 
ProdomI0ZN89 
UniProtKBH0Q6X8SubName: Full=Predicted ATP-dependent helicase;
InterProH0Q6X8 
PFAMH0Q6X8 
ProdomH0Q6X8 
UniProtKBA0A6M6PXZ5SubName: Full=ATP-dependent helicase HrpB {ECO:0000313|EMBL:QJZ14763.1}EC=3.6.4.13 {ECO:0000313|EMBL:QJZ14763.1}
InterProA0A6M6PXZ5 
PFAMA0A6M6PXZ5 
ProdomA0A6M6PXZ5 
UniProtKBP37024.3HRPB_ECOLI RecName: Full=ATP-dependent RNA helicase hrpB
InterProP37024.3 
PFAMP37024.3 
ProdomP37024.3 
UniProtKBQ2MCG2RecName: Full=ATP-dependent RNA helicase HrpB;EC=3.6.4.13;
InterProQ2MCG2 
PFAMQ2MCG2 
ProdomQ2MCG2 
UniProtKBP37024RecName: Full=ATP-dependent RNA helicase HrpB;EC=3.6.4.13;
InterProP37024 
PFAMP37024 
ProdomP37024 
UniProtKBP75663RecName: Full=ATP-dependent RNA helicase HrpB;EC=3.6.4.13;
InterProP75663 
PFAMP75663 
ProdomP75663 
RefSeqYP_001729105.1 ATP-dependent helicase [Escherichia coli str. K-12 substr. DH10B]
RefSeqAP_000809.1 predicted ATP-dependent helicase [Escherichia coli str. K-12 substr. W3110]
RefSeqYP_002925343.1 putative ATP-dependent helicase [Escherichia coli BW2952]
RefSeqNP_414690.4 predicted ATP-dependent helicase [Escherichia coli str. K-12 substr. MG1655]
PDB6HEGAATP-dependent RNA helicase HrpB
GenPept682117752putative ATP-dependent helicase
GenPept817581808putative ATP-dependent helicase
GenPept808703313ATP-dependent helicase HrpB
GenPept808698941ATP-dependent helicase HrpB
GenPept802133769putative ATP-dependent helicase
GenPept732685884ATP-dependent helicase HrpB
GenPept731470337putative ATP-dependent helicase
GenPept730582608putative ATP-dependent helicase
GenPept687675375predicted ATP-dependent helicase
GenPept687671089predicted ATP-dependent helicase
GenPept664682592ATP-dependent helicase HrpB
GenPept557270661ATP-dependent RNA helicase HrpB
GenPept359331011predicted ATP-dependent helicase
GenPept2507332HRPB_ECOLI RecName: Full=ATP-dependent RNA helicase hrpB
GenPept238899547 putative ATP-dependent helicase [Escherichia coli BW2952]
GenPept238862173predicted ATP-dependent helicase
GenPept170079785 ATP-dependent helicase [Escherichia coli str. K-12 substr. DH10B]
GenPept169887620predicted ATP-dependent helicase
GenPept808707692ATP-dependent helicase HrpB
GenPept808712053ATP-dependent helicase HrpB
GenPept89107029 predicted ATP-dependent helicase [Escherichia coli str. K-12 substr. W3110]
GenPept87081693putative ATP-dependent helicase
GenPept85674354predicted ATP-dependent helicase
GenPept827620814putative ATP-dependent helicase protein
GenPept827617867putative ATP-dependent helicase protein
GenPept817590090putative ATP-dependent helicase
GenPept817585949putative ATP-dependent helicase
GenPept162135893 predicted ATP-dependent helicase [Escherichia coli str. K-12 substr. MG1655]
GenPept817577669putative ATP-dependent helicase
GenPept817573527putative ATP-dependent helicase
GenPept808733569ATP-dependent helicase HrpB
GenPept808729157ATP-dependent helicase HrpB
GenPept808720835ATP-dependent helicase HrpB
GenPept808716466ATP-dependent helicase HrpB
GenBankACB01327.1 predicted ATP-dependent helicase [Escherichia coli str. K-12 substr. DH10B]
GenBankACR64171.1 predicted ATP-dependent helicase [Escherichia coli BW2952]
GenBankAAC73259.2 predicted ATP-dependent helicase [Escherichia coli str. K-12 substr. MG1655]