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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link B4DET9
Original Database ID EN ENSP00000386120
Organism Homo sapiens
Annotation subname: full=phosphatidate phosphatase
lpin1;subname: full=cdna flj51758,
highl y similar to lipin-1;
Sequence Length 391

Dataset Information:

The newest dataset for this sequence was created on 2010-11-02. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region169-225
Protein Length391
Template PDB Code1yj5A
Template Region160-217
Sequence Identity28%
E-Value0.25
GA3410.1
MPQS0.30318
z-DOPE0.66
TSVMod MethodMTALL
TSVMod RMSD5.044
TSVMod NO350.451
Datasethuman_2010_A1
ModPipe VersionSVN.r1188:1193
Model Date2010-11-02

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1yj5molecular architecture of mammalian polynucleotide kinase, a dna repair enzyme
DBALI1yj5A 
JenaImageLibrary1yj5 
Target Sequence
SFLD194375712Structure Function Linkage Database entry: Member of the Haloacid dehalogenase superfamily.
UniProtKBB4DET9SubName: Full=Phosphatidate phosphatase LPIN1;SubName: Full=cDNA FLJ51758, highly similar to Lipin-1;
InterProB4DET9 
PFAMB4DET9 
ProdomB4DET9 
UniProtKBB5MC18SubName: Full=Phosphatidate phosphatase LPIN1;SubName: Full=cDNA FLJ51758, highly similar to Lipin-1;
InterProB5MC18 
PFAMB5MC18 
ProdomB5MC18 
UniProtKBB4DET9SubName: Full=Phosphatidate phosphatase LPIN1;SubName: Full=cDNA FLJ51758, highly similar to Lipin-1;
InterProB4DET9 
PFAMB4DET9 
ProdomB4DET9 
UniProtKBB5MC18SubName: Full=Phosphatidate phosphatase LPIN1;SubName: Full=cDNA FLJ51758, highly similar to Lipin-1;
InterProB5MC18 
PFAMB5MC18 
ProdomB5MC18 
GenPept194375712unnamed protein product
ENSEMBLENSP00000386120