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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 913722
Original Database ID gi 913722
Organism Homo sapiens
Annotation trkc
Sequence Length 839

Dataset Information:

The newest dataset for this sequence was created on 2004-10-12. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region39-390
Protein Length839
Template PDB Code1olzA
Template Region254-615
Sequence Identity11%
E-Value3e-10
GA3410.04
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-Mut Somatic mutation found in advanced pancreatic tumor for CCDS10340.1 E322K
Template Structure
PDB1olzthe ligand-binding face of the semaphorins revealed by the high resolution crystal structure of sema4d
DBALI1olzA 
CATH2.130.10.10 Domain: 1olzA01 YVTN repeat-like/Quinoprotein amine dehydrogenase (47%)
CATH3.30.1680.10 Domain: 1olzA02 ligand-binding face of the semaphorins, domain 2 (100%)
CATH2.60.40.10 Domain: 1olzA03 Immunoglobulins (86%)
JenaImageLibrary1olz 
Target Sequence
UniProtKBQ16288NT-3 growth factor receptor precursor (EC 2.7.10.1) (NeurotrophicDE tyrosine kinase receptor type 3) (TrkC tyrosine kinase) (GP145-TrkC)DE (Trk-C)
InterProQ16288 
PFAMQ16288 
ProdomQ16288 
2103287B2103287B trkC gene
GenPept913722trkC
GenPept7224662Sequence 6 from patent US 5910574
GenPept5992527Sequence 6 from patent US 5844092
GenPept314172416Sequence 6 from patent US 7750122
GenPept2497562TRKC_HUMAN NT-3 GROWTH FACTOR RECEPTOR PRECURSOR (TRKC TYROSINE KINASE) (GP145-TRKC) (TRK-C)
GenPept2117846I73632 neurotrophin-3 receptor precursor - human
GenPept14102961Sequence 6 from patent US 6153189
GenPept10933462103287B trkC gene
GenBankAAB33111.1 trkC [Homo sapiens]
IPIIPI00000824.1 
UCSCGenomeBrowserQ16288