University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 15825692
Original Database ID UP P60472
Organism
Annotation a chain a, structure of e.coli
undecaprenyl pyrophosphate synthase
Sequence Length 253

Dataset Information:

The newest dataset for this sequence was created on 2013-03-05. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region10-244
Protein Length253
Template PDB Code2vg3A
Template Region64-294
Sequence Identity41%
E-Value0
GA3411
MPQS1.55765
z-DOPE-1.35
TSVMod MethodMTALL
TSVMod RMSD2.329
TSVMod NO350.901
DatasetEFI_update-20130214-01-1235
ModPipe VersionSVN.r1409M
Model Date2013-03-05

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2vg3rv2361 with citronellyl pyrophosphate
DBALI2vg3A 
JenaImageLibrary2vg3 
Target Sequence
PDB1JP3B Chain B, Structure Of E.Coli Undecaprenyl Pyrophosphate Synthase
PDB1JP3AChain A, Structure Of E.Coli Undecaprenyl Pyrophosphate Synthase
PDB1JP3BChain B, Structure Of E.Coli Undecaprenyl Pyrophosphate Synthase
GenPept15825692A Chain A, Structure Of E.Coli Undecaprenyl Pyrophosphate Synthase
GenPept15825693B Chain B, Structure Of E.Coli Undecaprenyl Pyrophosphate Synthase