University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 254839198
Original Database ID GI 254839198
Organism
Annotation a chain a, crystal structure of
human magnesium-dependent phosphatase
1 of the h aloacid dehalogenase
superfamily (mgc5987)
Sequence Length 187

Dataset Information:

The newest dataset for this sequence was created on 2012-11-19. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region2-44
Protein Length187
Template PDB Code2kdnA
Template Region5-43
Sequence Identity49%
E-Value0.012
GA3410.05
MPQS0.418347
z-DOPE1.76
TSVMod MethodMSALL
TSVMod RMSD10.439
TSVMod NO350.059
Datasetefi_updates_1
ModPipe VersionSVN.r1372
Model Date2012-11-19

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2kdnsolution structure of pfe0790c, a putative bola-like protein from the protozoan parasite plasmodium falciparum.
DBALI2kdnA 
JenaImageLibrary2kdn 
Target Sequence
SFLD254839198Structure Function Linkage Database entry: Member of the Haloacid dehalogenase superfamily.
PDB2WM8A Chain A, Crystal Structure Of Human Magnesium-Dependent Phosphatase 1 Of The Haloacid Dehalogenase Superfamily (Mgc5987)
PDB2WM8AChain A, Crystal Structure Of Human Magnesium-Dependent Phosphatase 1 Of The Haloacid Dehalogenase Superfamily (Mgc5987)
GenPept254839198A Chain A, Crystal Structure Of Human Magnesium-Dependent Phosphatase 1 Of The Haloacid Dehalogenase Superfamily (Mgc5987)