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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 37589083
Original Database ID GI 37589083
Organism Homo sapiens
Annotation caspase 2, apoptosis-related cysteine
peptidase
Sequence Length 452

Dataset Information:

The newest dataset for this sequence was created on 2014-06-29. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region40-120
Protein Length452
Template PDB Code3ygsP
Template Region10-92
Sequence Identity35%
E-Value0.069
GA3411
MPQS0.707904
z-DOPE-1.38
TSVMod MethodMTALL
TSVMod RMSD2.407
TSVMod NO350.914
DatasetMW-EFI_update_D34
ModPipe VersionSVN.r1593
Model Date2014-06-29

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB3ygsapaf-1 card in complex with prodomain of procaspase-9 ; PFAM: PF00619 ; SCOP: 18435
DBALI3ygsP 
CATH1.10.533.10 Domain: 3ygsP00 Death Domain, Fas (86%)
JenaImageLibrary3ygs 
Target Sequence
UniProtKBQ9BUP7Caspase 2, isoform 1 preproprotein
InterProQ9BUP7 
PFAMQ9BUP7 
ProdomQ9BUP7 
GenPept37589083Caspase 2, apoptosis-related cysteine peptidase
GenPept649117794CASP2, partial
GenBankAAH02427.2 Caspase 2, apoptosis-related cysteine peptidase [Homo sapiens]
UCSCGenomeBrowserQ9BUP7