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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 159794819
Original Database ID GI 159794820
Organism
Annotation a chain a, structure of human
cytosolic deoxyribonucleotidase
in complex with de oxyuridine,
alf4 and mg2+
Sequence Length 193

Dataset Information:

The newest dataset for this sequence was created on 2011-07-03. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region1-193
Protein Length193
Template PDB Code1q92A
Template Region34-226
Sequence Identity62%
E-Value0
GA3411
MPQS1.8636
z-DOPE-1.5
TSVMod MethodMTALL
TSVMod RMSD0.784
TSVMod NO350.987
Datasetsuperfamily_HAD_A1
ModPipe VersionSVN.r1188:1193
Model Date2011-07-03

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1q92crystal structure of human mitochondrial deoxyribonucleotidase in complex with the inhibitor pmcp-u
DBALI1q92A 
CATH3.40.50.1000 Domain: 1q92A01 Rossmann fold (99%)
CATH1.10.40.40 Domain: 1q92A02 Deoxyribonucleotidase; domain 2 (100%)
JenaImageLibrary1q92 
Target Sequence
SFLD159794820Structure Function Linkage Database entry: Member of the Haloacid dehalogenase superfamily.
PDB2I7DB Chain B, Structure Of Human Cytosolic Deoxyribonucleotidase In Complex With Deoxyuridine, Alf4 And Mg2+
PDB2I7DAChain A, Structure Of Human Cytosolic Deoxyribonucleotidase In Complex With Deoxyuridine, Alf4 And Mg2+
PDB2I7DBChain B, Structure Of Human Cytosolic Deoxyribonucleotidase In Complex With Deoxyuridine, Alf4 And Mg2+
GenPept159794819A Chain A, Structure Of Human Cytosolic Deoxyribonucleotidase In Complex With Deoxyuridine, Alf4 And Mg2+
GenPept159794820B Chain B, Structure Of Human Cytosolic Deoxyribonucleotidase In Complex With Deoxyuridine, Alf4 And Mg2+