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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 239642040
Original Database ID TR P55072
Organism Homo sapiens
Annotation sequence 857 from patent us 7521195
Sequence Length 805

Dataset Information:

The newest dataset for this sequence was created on 2005-10-06. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region474-790
Protein Length805
Template PDB Code1hqcA
Template Region10-313
Sequence Identity16%
E-Value5e-32
GA3410.52
Datasetsnp-human3
ModPipe VersionModPipe1.0
Model Date2005-10-06

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1hqcstructure of ruvb from thermus thermophilus hb8 ; PFAM: PF00004 PF05491 PF05496 ; SCOP: 16127 32424
DBALI1hqcA 
CATH3.40.50.300 Domain: 1hqcA01 P-loop containing nucleotide triphosphate hydrolases (97%)
CATH1.10.8.60 Domain: 1hqcA02 Helicase, Ruva Protein; domain 3 (100%)
CATH1.10.10.10 Domain: 1hqcA03 "winged helix" repressor DNA binding domain (93%)
JenaImageLibrary1hqc 
Target Sequence
UniProtKBP55072Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-DE ATPase p97 subunit) (Valosin-containing protein) (VCP)
InterProP55072 
PFAMP55072 
ProdomP55072 
GenPept239642040Sequence 857 from patent US 7521195
GenPept314875506Sequence 809 from patent US 7842466
GenPept314880211Sequence 453 from patent US 7842467