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ModBase: Database of Comparative Protein Structure Models

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Sequence Information

Primary Database Link P00393
Original Database ID TR DHNA_ECOLI
Organism Escherichia coli
Annotation nadh dehydrogenase (ec 1.6.99.3)
Sequence Length 433

Dataset Information:

The newest dataset for this sequence was created on 2004-10-12. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region5-433
Protein Length433
Template PDB Code1f8rA
Template Region34-453
Sequence Identity10%
E-Value5e-15
GA3410.15
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1f8rcrystal structure of l-amino acid oxidase from calloselasma rhodostoma complexed with citrate ; EC: 1.4.3.2 ; PFAM: PF01593 ; SCOP: 30410 37974
DBALI1f8rA 
CATH3.90.660.10 Domain: 1f8rA01 Polyamine Oxidase; Chain A, domain 2 (100%)
CATH3.50.50.60 Domain: 1f8rA02 FAD/NAD(P)-binding domain (78%)
CATH1.10.405.10 Domain: 1f8rA03 Guanine Nucleotide Dissociation Inhibitor, domain 1 (100%)
JenaImageLibrary1f8r 
Target Sequence
UniProtKBP00393NADH dehydrogenase (EC 1.6.99.3)
InterProP00393 
PFAMP00393 
ProdomP00393