University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 606150
Original Database ID UP P0ADW6
Organism Escherichia coli
Annotation orf_f309
Sequence Length 309

Dataset Information:

The newest dataset for this sequence was created on 2014-10-12. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region170-309
Protein Length309
Template PDB Code2ekcA
Template Region9-135
Sequence Identity30%
E-Value0.025
GA3411
MPQS0.705774
z-DOPE-0.09
TSVMod MethodMSALL
TSVMod RMSD5.335
TSVMod NO350.614
DatasetMW-EFI_update_D63
ModPipe VersionSVN.r1596
Model Date2014-10-12

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2ekcstructural study of project id aq_1548 from aquifex aeolicus vf5
DBALI2ekcA 
CATH3.20.20.70 Domain: 2ekcA00 Aldolase class I (47%)
JenaImageLibrary2ekc 
Target Sequence
GenPept606150ORF_f309
GenBankAAA58013.1 ORF_f309 [Escherichia coli str. K-12 substr. MG1655]