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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q6W9G7
Original Database ID EN ENSP00000080059.7
Organism Homo sapiens
Annotation subname: full=histone deacetylase;subname:
full=cdna flj56143, highly similar
to histone deacetylase 7a;
Sequence Length 991

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region63-193
Protein Length991
Template PDB Code2cycA
Template Region217-371
Sequence Identity30%
E-Value0.84
GA3410.22
MPQS0.18939
z-DOPE0.26
TSVMod MethodMSALL
TSVMod RMSD14.53
TSVMod NO350.072
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB2cyccrystal structure of tyrosyl-trna synthetase complexed with l-tyrosine from pyrococcus horikoshii
DBALI2cycA 
CATH1.10.240.10 Domain: 2cycA02 Tyrosyl-Transfer RNA Synthetase (100%)
JenaImageLibrary2cyc 
Target Sequence
UniProtKBQ6W9G7SubName: Full=Histone deacetylase;SubName: Full=cDNA FLJ56143, highly similar to Histone deacetylase 7a;
InterProQ6W9G7 
PFAMQ6W9G7 
ProdomQ6W9G7 
RefSeqNP_001091885.1 histone deacetylase 7A isoform c [Homo sapiens]
RefSeqNP_056216.2 histone deacetylase 7 isoform a [Homo sapiens]
GenPept148539868 histone deacetylase 7A isoform c [Homo sapiens]
GenPept169234807 histone deacetylase 7 isoform a [Homo sapiens]
GenPept194387788unnamed protein product
GenPept224487805histone deacetylase 7, partial
GenPept33415445histone deacetylase
GenBankAAQ18232.1 histone deacetylase [Homo sapiens]
UCSCGenomeBrowserQ6W9G7 
ENSEMBLENSP00000080059