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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 913722
Original Database ID gi 913722
Organism Homo sapiens
Annotation trkc
Sequence Length 839

Dataset Information:

The newest dataset for this sequence was created on 2004-10-12. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

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  Template
PDB Code		 PDB
Segment		 PDB Comment CATH
coverage
or Link		 Dataset Seq
Ident		 E-value Model
Score		 Quality Modeled Segment
1olzA(254-615)the ligand-binding face of the semaphorins revealed by the high resolution crystal structure of sema4d2.130.10.10
3.30.1680.10
2.60.40.10		SP/TR-2004113e-100.04
1f97A(28-235)soluble part of the junction adhesion molecule from mouse2.60.40.10SP/TR-2004202e-140.15
1i1rA(5-232)crystal structure of a cytokine/receptor complex2.60.40.10SP/TR-2004114e-080.07
1ev2E(158-356)crystal structure of fgf2 in complex with the extracellular ligand binding domain of fgf receptor 2 (fgfr2)2.60.40.10SP/TR-2004191e-180.66
1ry7B(155-360)crystal structure of the 3 ig form of fgfr3c in complex with fgf12.60.40.10SP/TR-2004184e-160.16
1zxq(3-190)the crystal structure of icam-2CATHSP/TR-2004104e-120.01
1itbB(7-226)type-1 interleukin-1 receptor complexed with interleukin-1 beta2.60.40.10SP/TR-2004134e-090.02
1vcaA(10-194)crystal structure of an integrin-binding fragment of vascular cell adhesion molecule-1 at 1.8 angstroms resolution2.60.40.10SP/TR-2004126e-180.03
2shpA(25-518)tyrosine phosphatase shp-23.30.505.10
3.90.190.10		SP/TR-200481e-460.01
1fvrA(819-1104)tie2 kinase domain3.30.200.20
1.10.510.10		SP/TR-2004384e-821
1p4oA(964-1244)structure of apo unactivated igf-1r kinase domain at 1.5a resolution.3.30.200.20
1.10.510.10		SP/TR-2004413e-831
1m14A(683-959)tyrosine kinase domain from epidermal growth factor receptor3.30.200.20
1.10.510.10		SP/TR-2004327e-781

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-Mut Somatic mutation found in advanced pancreatic tumor for CCDS10340.1 E322K
Target Sequence
UniProtKBQ16288NT-3 growth factor receptor precursor (EC 2.7.10.1) (NeurotrophicDE tyrosine kinase receptor type 3) (TrkC tyrosine kinase) (GP145-TrkC)DE (Trk-C)
InterProQ16288 
PFAMQ16288 
ProdomQ16288 
2103287B2103287B trkC gene
GenPept913722trkC
GenPept7224662Sequence 6 from patent US 5910574
GenPept5992527Sequence 6 from patent US 5844092
GenPept314172416Sequence 6 from patent US 7750122
GenPept2497562TRKC_HUMAN NT-3 GROWTH FACTOR RECEPTOR PRECURSOR (TRKC TYROSINE KINASE) (GP145-TRKC) (TRK-C)
GenPept2117846I73632 neurotrophin-3 receptor precursor - human
GenPept14102961Sequence 6 from patent US 6153189
GenPept10933462103287B trkC gene
GenBankAAB33111.1 trkC [Homo sapiens]
IPIIPI00000824.1 
UCSCGenomeBrowserQ16288