University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q38J80
Original Database ID tr C1NFI5
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation subname: full=eptb;
Sequence Length 574

Dataset Information:

Only Template based calculation have been performed for this sequence. Template based calculations don't use all available PDB structures. To ensure that the most optimal template is used for this sequence, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Perform Action on Selected Model:


  Template
PDB Code
PDB
Segment
PDB Comment CATH
coverage
or Link
Dataset Seq
Ident
E-value Model
Score
Quality Modeled Segment
3ed4A(42-416)crystal structure of putative arylsulfatase from escherichia coliCATHcsmp_9-091401

Cross-references

Show obsolete/secondary identifiers
Target Sequence
UniProtKBQ38J80SubName: Full=EptB {ECO:0000313|EMBL:ABB02171.1};
InterProQ38J80 
PFAMQ38J80 
ProdomQ38J80 
UniProtKBF4SQT8SubName: Full=Membrane-protein YhjW {ECO:0000313|EMBL:EGI08777.1};
InterProF4SQT8 
PFAMF4SQT8 
ProdomF4SQT8 
UniProtKBC1NFI5SubName: Full=EptB;
InterProC1NFI5 
PFAMC1NFI5 
ProdomC1NFI5 
UniProtKBQ38J80SubName: Full=EptB;
InterProQ38J80 
PFAMQ38J80 
ProdomQ38J80 
UniProtKBF4SQT8SubName: Full=Membrane-protein YhjW;
InterProF4SQT8 
PFAMF4SQT8 
ProdomF4SQT8 
UniProtKBC1NFI5SubName: Full=EptB;
InterProC1NFI5 
PFAMC1NFI5 
ProdomC1NFI5 
UniProtKBA0A1X3JAU0SubName: Full=Membrane-protein YhjW {ECO:0000313|EMBL:OSL02770.1}
InterProA0A1X3JAU0 
PFAMA0A1X3JAU0 
ProdomA0A1X3JAU0 
UniProtKBP37661Membrane-protein yhjW
InterProP37661 
PFAMP37661 
ProdomP37661 
RefSeqZP_04872785.1 EptB [Escherichia sp. 1_1_43]
GenPept16131417 (NC_000913) orf, hypothetical protein [Escherichia coli K12]
GenPept77744296EptB
GenPept7465765D65153 64.9 kD protein in proK-tag intergenic region - Escherichia coli (strain K-12)
GenPept331036551membrane-protein YhjW
GenPept2851651YHJW_ECOLI 64.9 KD PROTEIN IN PROK-TAG INTERGENIC REGION
GenPept254038729 EptB [Escherichia sp. 1_1_43]
GenPept2367242orf, hypothetical protein; putative transmembrane protein
GenPept226839235EptB
GenBankEEH71258.1 EptB [Escherichia sp. 1_1_43]
GenBankABB02171.1 EptB [Escherichia coli str. K-12 substr. W3110]