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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link B2RCB3
Original Database ID EN ENSP00000478668.1
Organism Homo sapiens
Annotation subname: full=poly(a)-specific
ribonuclease (deadenylation nuclease),
isoform cr a_a;subname: full=cdna,
flj95954, homo sapiens poly(a)-specific
ribon ...
Sequence Length 639

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region1-512
Protein Length639
Template PDB Code3d45B
Template Region1-505
Sequence Identity95%
E-Value0
GA3411
MPQS1.43125
z-DOPE0.28
TSVMod MethodMSALL
TSVMod RMSD6.581
TSVMod NO350.863
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3d45crystal structure of mouse parn in complex with m7gpppg
DBALI3d45B 
JenaImageLibrary3d45 
Target Sequence
UniProtKBB2RCB3RecName: Full=Poly(A)-specific ribonuclease PARN;EC=3.1.13.4;AltName: Full=Deadenylating nuclease;AltName: Full=Deadenylation nuclease;AltName: Full=Polyadenylate-specific ribonuclease;
InterProB2RCB3 
PFAMB2RCB3 
ProdomB2RCB3 
UniProtKBB4DDG8RecName: Full=Poly(A)-specific ribonuclease PARN;EC=3.1.13.4;AltName: Full=Deadenylating nuclease;AltName: Full=Deadenylation nuclease;AltName: Full=Polyadenylate-specific ribonuclease;
InterProB4DDG8 
PFAMB4DDG8 
ProdomB4DDG8 
UniProtKBB4DWR4RecName: Full=Poly(A)-specific ribonuclease PARN;EC=3.1.13.4;AltName: Full=Deadenylating nuclease;AltName: Full=Deadenylation nuclease;AltName: Full=Polyadenylate-specific ribonuclease;
InterProB4DWR4 
PFAMB4DWR4 
ProdomB4DWR4 
UniProtKBB4E1H6RecName: Full=Poly(A)-specific ribonuclease PARN;EC=3.1.13.4;AltName: Full=Deadenylating nuclease;AltName: Full=Deadenylation nuclease;AltName: Full=Polyadenylate-specific ribonuclease;
InterProB4E1H6 
PFAMB4E1H6 
ProdomB4E1H6 
UniProtKBO95453RecName: Full=Poly(A)-specific ribonuclease PARN;EC=3.1.13.4;AltName: Full=Deadenylating nuclease;AltName: Full=Deadenylation nuclease;AltName: Full=Polyadenylate-specific ribonuclease;
InterProO95453 
PFAMO95453 
ProdomO95453 
UniProtKBB2RCB3SubName: Full=Poly(A)-specific ribonuclease (Deadenylation nuclease), isoform CRA_a;SubName: Full=cDNA, FLJ95954, Homo sapiens poly(A)-specific ribonuclease (deadenylation nuclease)(PARN), mRNA;
InterProB2RCB3 
PFAMB2RCB3 
ProdomB2RCB3 
UniProtKBO95453Poly(A)-specific ribonuclease (PARN protein)
InterProO95453 
PFAMO95453 
ProdomO95453 
UniProtKBB2RCB3RecName: Full=Poly(A)-specific ribonuclease PARN;EC=3.1.13.4;AltName: Full=Deadenylating nuclease;AltName: Full=Deadenylation nuclease;AltName: Full=Polyadenylate-specific ribonuclease;
InterProB2RCB3 
PFAMB2RCB3 
ProdomB2RCB3 
UniProtKBO95453.1PARN_HUMAN RecName: Full=Poly(A)-specific ribonuclease PARN; AltName: Full=Deadenylating nuclease; AltName: Full=Deadenylation nuclease; AltName: Full=Polyadenylate-specific ribonuclease
InterProO95453.1 
PFAMO95453.1 
ProdomO95453.1 
UniProtKBB4DDG8RecName: Full=Poly(A)-specific ribonuclease PARN;EC=3.1.13.4;AltName: Full=Deadenylating nuclease;AltName: Full=Deadenylation nuclease;AltName: Full=Polyadenylate-specific ribonuclease;
InterProB4DDG8 
PFAMB4DDG8 
ProdomB4DDG8 
UniProtKBB4DSB0RecName: Full=Poly(A)-specific ribonuclease PARN;EC=3.1.13.4;AltName: Full=Deadenylating nuclease;AltName: Full=Deadenylation nuclease;AltName: Full=Polyadenylate-specific ribonuclease;
InterProB4DSB0 
PFAMB4DSB0 
ProdomB4DSB0 
UniProtKBO95453RecName: Full=Poly(A)-specific ribonuclease PARN;EC=3.1.13.4;AltName: Full=Deadenylating nuclease;AltName: Full=Deadenylation nuclease;AltName: Full=Polyadenylate-specific ribonuclease;
InterProO95453 
PFAMO95453 
ProdomO95453 
UniProtKBB4DWR4RecName: Full=Poly(A)-specific ribonuclease PARN;EC=3.1.13.4;AltName: Full=Deadenylating nuclease;AltName: Full=Deadenylation nuclease;AltName: Full=Polyadenylate-specific ribonuclease;
InterProB4DWR4 
PFAMB4DWR4 
ProdomB4DWR4 
UniProtKBB4E1H6RecName: Full=Poly(A)-specific ribonuclease PARN;EC=3.1.13.4;AltName: Full=Deadenylating nuclease;AltName: Full=Deadenylation nuclease;AltName: Full=Polyadenylate-specific ribonuclease;
InterProB4E1H6 
PFAMB4E1H6 
ProdomB4E1H6 
RefSeqNP_002573.1 poly(A)-specific ribonuclease PARN isoform 1 [Homo sapiens]
GenPept119605516poly(A)-specific ribonuclease (deadenylation nuclease), isoform CRA_a
GenPept15315299 poly(A)-specific ribonuclease (deadenylation nuclease) [Homo sapiens]
GenPept189054660unnamed protein product
GenPept29477165PARN protein
GenPept325463607poly(A)-specific ribonuclease (deadenylation nuclease), partial
GenPept331631280Sequence 1450 from patent US 7919467
GenPept3776076poly(A)-specific ribonuclease
GenPept4505611 poly(A)-specific ribonuclease PARN isoform 1 [Homo sapiens]
GenPept568533435Sequence 18310 from patent US 8586006
GenPept60390262PARN_HUMAN RecName: Full=Poly(A)-specific ribonuclease PARN; AltName: Full=Deadenylating nuclease; AltName: Full=Deadenylation nuclease; AltName: Full=Polyadenylate-specific ribonuclease
GenPept649101947PARN, partial
GenPept9997509unnamed protein product
GenBankEAW85110.1 poly(A)-specific ribonuclease (deadenylation nuclease), isoform CRA_a [Homo sapiens]
GenBankAAH50029.1 PARN protein [Homo sapiens]
EMBLCAA06683.1 
UCSCGenomeBrowserO95453 
ENSEMBLENSP00000387911