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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A0A024KVJ1
Original Database ID ref YP_001165309.1
Organism Agrobacterium tumefaciens, Escherichia coli, etc.
Annotation subname: full=uncharacterized
protein {eco:0000313|embl:cdp68905.1};
Sequence Length 64

Dataset Information:

The newest dataset for this sequence was created on 2011-08-28. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region12-63
Protein Length64
Template PDB Code1oqvA
Template Region30-83
Sequence Identity33%
E-Value0.64
GA3410.31
MPQS1.1947
z-DOPE-0.6
Datasete_coli_83333_B1
ModPipe VersionSVN.r1372
Model Date2011-08-28

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1oqvstructure of tcpa, the type iv pilin subunit from the toxin co-regulated pilus of vibrio cholerae classical biotype
DBALI1oqvA 
CATH3.30.1690.10 Domain: 1oqvA00 TcpA-like pilin (32%)
JenaImageLibrary1oqv 
Target Sequence
UniProtKBX5K5U4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CDN72841.1};
InterProX5K5U4 
PFAMX5K5U4 
ProdomX5K5U4 
UniProtKBA0A024KVJ1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CDP68905.1};
InterProA0A024KVJ1 
PFAMA0A024KVJ1 
ProdomA0A024KVJ1 
UniProtKBA0A071BQT7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY83960.1};
InterProA0A071BQT7 
PFAMA0A071BQT7 
ProdomA0A071BQT7 
UniProtKBA5A607RecName: Full=Uncharacterized protein YlcI;
InterProA5A607 
PFAMA5A607 
ProdomA5A607 
UniProtKBA0A079G9W4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY85136.1};
InterProA0A079G9W4 
PFAMA0A079G9W4 
ProdomA0A079G9W4 
UniProtKBC4ZV06SubName: Full=Putative uncharacterized protein ylcI;
InterProC4ZV06 
PFAMC4ZV06 
ProdomC4ZV06 
UniProtKBA0A0F7DRQ4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KLG50921.1};
InterProA0A0F7DRQ4 
PFAMA0A0F7DRQ4 
ProdomA0A0F7DRQ4 
UniProtKBC6EJF5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ACT29893.1};
InterProC6EJF5 
PFAMC6EJF5 
ProdomC6EJF5 
UniProtKBD3AV97SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFC94259.1};
InterProD3AV97 
PFAMD3AV97 
ProdomD3AV97 
UniProtKBP77085RecName: Full=Uncharacterized protein YlcI;
InterProP77085 
PFAMP77085 
ProdomP77085 
UniProtKBA0A079FN01SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY57296.1};
InterProA0A079FN01 
PFAMA0A079FN01 
ProdomA0A079FN01 
UniProtKBI2I0C0SubName: Full=Uncharacterized protein;
InterProI2I0C0 
PFAMI2I0C0 
ProdomI2I0C0 
UniProtKBH4VDA5SubName: Full=DsbGoxidized;
InterProH4VDA5 
PFAMH4VDA5 
ProdomH4VDA5 
UniProtKBA0A5Q3TJ77SubName: Full=DUF3950 domain-containing protein {ECO:0000313|EMBL:QGL43930.1}
InterProA0A5Q3TJ77 
PFAMA0A5Q3TJ77 
ProdomA0A5Q3TJ77 
UniProtKBA0A619MG54SubName: Full=DUF3950 domain-containing protein {ECO:0000313|EMBL:ECX7269750.1}
InterProA0A619MG54 
PFAMA0A619MG54 
ProdomA0A619MG54 
UniProtKBA0A5E8FK83SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CDU36096.1}
InterProA0A5E8FK83 
PFAMA0A5E8FK83 
ProdomA0A5E8FK83 
UniProtKBA0A543QP91SubName: Full=DUF3950 domain-containing protein {ECO:0000313|EMBL:TQN58134.1}
InterProA0A543QP91 
PFAMA0A543QP91 
ProdomA0A543QP91 
UniProtKBA0A4Y9NDU6SubName: Full=DUF3950 domain-containing protein {ECO:0000313|EMBL:TFV65884.1}
InterProA0A4Y9NDU6 
PFAMA0A4Y9NDU6 
ProdomA0A4Y9NDU6 
UniProtKBA0A558S5Q9SubName: Full=DUF3950 domain-containing protein {ECO:0000313|EMBL:TVV86984.1}
InterProA0A558S5Q9 
PFAMA0A558S5Q9 
ProdomA0A558S5Q9 
UniProtKBA0A417YDK5SubName: Full=DUF3950 domain-containing protein {ECO:0000313|EMBL:RHW30697.1}
InterProA0A417YDK5 
PFAMA0A417YDK5 
ProdomA0A417YDK5 
UniProtKBA0A3V5QWR4SubName: Full=DUF3950 domain-containing protein {ECO:0000313|EMBL:EAA8235183.1}
InterProA0A3V5QWR4 
PFAMA0A3V5QWR4 
ProdomA0A3V5QWR4 
UniProtKBA0A3S0INZ1SubName: Full=DUF3950 domain-containing protein {ECO:0000313|EMBL:RTR36645.1}
InterProA0A3S0INZ1 
PFAMA0A3S0INZ1 
ProdomA0A3S0INZ1 
UniProtKBA0A417YA13SubName: Full=DUF3950 domain-containing protein {ECO:0000313|EMBL:RHW29357.1}
InterProA0A417YA13 
PFAMA0A417YA13 
ProdomA0A417YA13 
UniProtKBA0A346FJ76DUF3950 domain-containing protein {ECO:0000259|Pfam:PF13132}
InterProA0A346FJ76 
PFAMA0A346FJ76 
ProdomA0A346FJ76 
UniProtKBA0A2G1VLJ6DUF3950 domain-containing protein {ECO:0000259|Pfam:PF13132}
InterProA0A2G1VLJ6 
PFAMA0A2G1VLJ6 
ProdomA0A2G1VLJ6 
UniProtKBA0A246E3V2DUF3950 domain-containing protein {ECO:0000259|Pfam:PF13132}
InterProA0A246E3V2 
PFAMA0A246E3V2 
ProdomA0A246E3V2 
UniProtKBA0A627WTW2SubName: Full=DUF3950 domain-containing protein {ECO:0000313|EMBL:EDD0346332.1}
InterProA0A627WTW2 
PFAMA0A627WTW2 
ProdomA0A627WTW2 
UniProtKBA0A637C0Y0DUF3950 domain-containing protein {ECO:0000259|Pfam:PF13132}
InterProA0A637C0Y0 
PFAMA0A637C0Y0 
ProdomA0A637C0Y0 
UniProtKBA0A657F507SubName: Full=DUF3950 domain-containing protein {ECO:0000313|EMBL:MIR96471.1}
InterProA0A657F507 
PFAMA0A657F507 
ProdomA0A657F507 
UniProtKBI2I0C0SubName: Full=Uncharacterized protein;
InterProI2I0C0 
PFAMI2I0C0 
ProdomI2I0C0 
UniProtKBH4VDA5SubName: Full=DsbGoxidized;
InterProH4VDA5 
PFAMH4VDA5 
ProdomH4VDA5 
UniProtKBC6EJF5SubName: Full=Putative uncharacterized protein;
InterProC6EJF5 
PFAMC6EJF5 
ProdomC6EJF5 
UniProtKBC4ZV06SubName: Full=Putative uncharacterized protein ylcI;
InterProC4ZV06 
PFAMC4ZV06 
ProdomC4ZV06 
UniProtKBA0A9X4QK79SubName: Full=YlcI/YnfO family protein {ECO:0000313|EMBL:MDG0789408.1}
InterProA0A9X4QK79 
PFAMA0A9X4QK79 
ProdomA0A9X4QK79 
UniProtKBA0A974PIX5SubName: Full=YlcI/YnfO family protein {ECO:0000313|EMBL:QQZ64711.1}
InterProA0A974PIX5 
PFAMA0A974PIX5 
ProdomA0A974PIX5 
UniProtKBA0A8F9H983SubName: Full=YlcI/YnfO family protein {ECO:0000313|EMBL:QYE24715.1}
InterProA0A8F9H983 
PFAMA0A8F9H983 
ProdomA0A8F9H983 
UniProtKBA0A8F8DGZ7SubName: Full=YlcI/YnfO family protein {ECO:0000313|EMBL:QXZ35873.1}
InterProA0A8F8DGZ7 
PFAMA0A8F8DGZ7 
ProdomA0A8F8DGZ7 
UniProtKBA0A855WG50SubName: Full=DUF3950 domain-containing protein {ECO:0000313|EMBL:PUW01160.1}
InterProA0A855WG50 
PFAMA0A855WG50 
ProdomA0A855WG50 
UniProtKBA0A850DYW4SubName: Full=YlcI/YnfO family protein {ECO:0000313|EMBL:NUU39504.1}
InterProA0A850DYW4 
PFAMA0A850DYW4 
ProdomA0A850DYW4 
UniProtKBA0A846AU65SubName: Full=DUF3950 domain-containing protein {ECO:0000313|EMBL:NER40404.1}
InterProA0A846AU65 
PFAMA0A846AU65 
ProdomA0A846AU65 
UniProtKBA0A7Y6BX67SubName: Full=YlcI/YnfO family protein {ECO:0000313|EMBL:NUU76461.1}
InterProA0A7Y6BX67 
PFAMA0A7Y6BX67 
ProdomA0A7Y6BX67 
UniProtKBA0A7W4KPT6SubName: Full=YlcI/YnfO family protein {ECO:0000313|EMBL:MBB2254531.1}
InterProA0A7W4KPT6 
PFAMA0A7W4KPT6 
ProdomA0A7W4KPT6 
UniProtKBA0A7U1EZZ6SubName: Full=YlcI/YnfO family protein {ECO:0000313|EMBL:QQZ64711.1}
InterProA0A7U1EZZ6 
PFAMA0A7U1EZZ6 
ProdomA0A7U1EZZ6 
UniProtKBA0A7G0XSV6DUF3950 domain-containing protein {ECO:0000259|Pfam:PF13132}
InterProA0A7G0XSV6 
PFAMA0A7G0XSV6 
ProdomA0A7G0XSV6 
UniProtKBA0A6I5PK27SubName: Full=DUF3950 domain-containing protein {ECO:0000313|EMBL:NER40404.1}
InterProA0A6I5PK27 
PFAMA0A6I5PK27 
ProdomA0A6I5PK27 
UniProtKBA0A6B5JJH1SubName: Full=DUF3950 domain-containing protein {ECO:0000313|EMBL:NGA81272.1}
InterProA0A6B5JJH1 
PFAMA0A6B5JJH1 
ProdomA0A6B5JJH1 
UniProtKBP77085Putative uncharacterized protein (Putative uncharacterized proteinylcI).
InterProP77085 
PFAMP77085 
ProdomP77085 
UniProtKBA0A1Q5D7U1DUF3950 domain-containing protein {ECO:0000259|Pfam:PF13132}
InterProA0A1Q5D7U1 
PFAMA0A1Q5D7U1 
ProdomA0A1Q5D7U1 
UniProtKBA0A140NCC0SubName: Full=YlcI/YnfO family protein {ECO:0000313|EMBL:QJZ11496.1}
InterProA0A140NCC0 
PFAMA0A140NCC0 
ProdomA0A140NCC0 
UniProtKBA0A0K2FIR8DUF3950 domain-containing protein {ECO:0000259|Pfam:PF13132}
InterProA0A0K2FIR8 
PFAMA0A0K2FIR8 
ProdomA0A0K2FIR8 
UniProtKBA0A637G7F0DUF3950 domain-containing protein {ECO:0000259|Pfam:PF13132}
InterProA0A637G7F0 
PFAMA0A637G7F0 
ProdomA0A637G7F0 
UniProtKBD3AV97SubName: Full=Putative uncharacterized protein;
InterProD3AV97 
PFAMD3AV97 
ProdomD3AV97 
UniProtKBP77085RecName: Full=Uncharacterized protein YlcI;
InterProP77085 
PFAMP77085 
ProdomP77085 
UniProtKBA5A607.1YLCI_ECOLI RecName: Full=Uncharacterized protein ylcI
InterProA5A607.1 
PFAMA5A607.1 
ProdomA5A607.1 
UniProtKBA5A607RecName: Full=Uncharacterized protein YlcI;
InterProA5A607 
PFAMA5A607 
ProdomA5A607 
RefSeqYP_001165309.1 hypothetical protein b4589 [Escherichia coli str. K-12 substr. MG1655]
RefSeqYP_002925635.1 hypothetical protein BWG_0433 [Escherichia coli BW2952]
RefSeqZP_06410303.1 conserved hypothetical protein [Clostridium hathewayi DSM 13479]
RefSeqYP_003037078.1 hypothetical protein ECBD_2875 [Escherichia coli BL21-Gold(DE3)pLysS AG]
RefSeqYP_009909831.1hypothetical protein H3V33_gp43
GenPept557270953hypothetical protein BN896_0433
GenPept549812081ylcI
GenPept808699336hypothetical protein SH05_06595
GenPept288871787 conserved hypothetical protein [Clostridium hathewayi DSM 13479]
GenPept288861961 conserved hypothetical protein [Clostridium hathewayi DSM 13479]
GenPept665435790Putative uncharacterized protein ylcI
GenPept145693102DUF3950 family protein, DLP12 prophage
GenPept145698229 hypothetical protein b4589 [Escherichia coli str. K-12 substr. MG1655]
GenPept162416077YLCI_ECOLI RecName: Full=Uncharacterized protein ylcI
GenPept1778472hypothetical protein
GenPept238861473hypothetical protein BWG_0433
GenPept238899839 hypothetical protein BWG_0433 [Escherichia coli BW2952]
GenPept253325291hypothetical protein ECBD_2875
GenPept253774247 hypothetical protein ECBD_2875 [Escherichia coli BL21-Gold(DE3)pLysS AG]
GenPept682118125DUF3950 family protein, DLP12 prophage
GenPept687671488hypothetical protein ECHMS174_00569
GenPept687675748hypothetical protein ECRV308_00540
GenPept808729553hypothetical protein SH07_06605
GenPept808733964hypothetical protein SF31_06915
GenPept817573900DUF3950 family protein, DLP12 prophage
GenPept817578042DUF3950 family protein, DLP12 prophage
GenPept817582181DUF3950 family protein, DLP12 prophage
GenPept817586322DUF3950 family protein, DLP12 prophage
GenPept817590463DUF3950 family protein, DLP12 prophage
GenPept850014112hypothetical protein TZ57_03875
GenPept899721582hypothetical protein ADS71_02800
GenPept899725938hypothetical protein ADZ27_02800
GenPept921956293hypothetical protein
GenPept808721232hypothetical protein SH04_06600
GenPept730585790hypothetical protein ER2796_564
GenPept731473519hypothetical protein ER3413_564
GenPept732685494hypothetical protein EO53_15465
GenPept751400023hypothetical protein TH69_03870
GenPept802134138hypothetical protein b4589
GenPept808703707hypothetical protein SH02_06550
GenPept808708086hypothetical protein SH08_06595
GenPept808712451hypothetical protein SH03_06610
GenPept808716862hypothetical protein SH06_06915
GenPept899730309hypothetical protein ADZ28_02800
GenBankACT29893.1 hypothetical protein ECBD_2875 [Escherichia coli 'BL21-Gold(DE3)pLysS AG']