University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A0A069XSN2
Original Database ID ref NP_416866.1
Organism Escherichia coli, Shigella boydii, etc.
Annotation subname: full=dsdx permease {eco:0000313|embl:kdu32878.1};
Sequence Length 445

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region11-445
Protein Length445
Template PDB Code4r0cA
Template Region26-474
Sequence Identity22%
E-Value0
GA3410.29
MPQS1.00303
z-DOPE0.94
TSVMod MethodMSALL
TSVMod RMSD21.524
TSVMod NO350.153
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4r0c
DBALI4r0cA 
JenaImageLibrary4r0c 
Target Sequence
UniProtKBM9FUP4SubName: Full=DsdX permease {ECO:0000313|EMBL:EMX31180.1};
InterProM9FUP4 
PFAMM9FUP4 
ProdomM9FUP4 
UniProtKBA0A0H3XAB0SubName: Full=Putative GntP family permease {ECO:0000313|EMBL:AKM35928.1};
InterProA0A0H3XAB0 
PFAMA0A0H3XAB0 
ProdomA0A0H3XAB0 
UniProtKBI2VRT8SubName: Full=DsdX permease;
InterProI2VRT8 
PFAMI2VRT8 
ProdomI2VRT8 
UniProtKBI2PA22SubName: Full=DsdX permease;
InterProI2PA22 
PFAMI2PA22 
ProdomI2PA22 
UniProtKBH4X7K3SubName: Full=Gnt transporter;
InterProH4X7K3 
PFAMH4X7K3 
ProdomH4X7K3 
UniProtKBK3I097SubName: Full=DsdX permease;
InterProK3I097 
PFAMK3I097 
ProdomK3I097 
UniProtKBI2ZRY3SubName: Full=DsdX permease;
InterProI2ZRY3 
PFAMI2ZRY3 
ProdomI2ZRY3 
UniProtKBI2YKF5SubName: Full=DsdX permease;
InterProI2YKF5 
PFAMI2YKF5 
ProdomI2YKF5 
UniProtKBL3M5C4SubName: Full=DsdX permease;
InterProL3M5C4 
PFAML3M5C4 
ProdomL3M5C4 
UniProtKBL3KII7SubName: Full=DsdX permease {ECO:0000313|EMBL:ELD98697.1};
InterProL3KII7 
PFAML3KII7 
ProdomL3KII7 
UniProtKBL3TN76SubName: Full=DsdX permease;
InterProL3TN76 
PFAML3TN76 
ProdomL3TN76 
UniProtKBA0A0E3MWN5SubName: Full=DsdX permease {ECO:0000313|EMBL:AKA91425.1};
InterProA0A0E3MWN5 
PFAMA0A0E3MWN5 
ProdomA0A0E3MWN5 
UniProtKBA0A0E2TYP3SubName: Full=DsdX permease {ECO:0000313|EMBL:EYV14397.1};
InterProA0A0E2TYP3 
PFAMA0A0E2TYP3 
ProdomA0A0E2TYP3 
UniProtKBH4VIY7SubName: Full=DsdX permease;
InterProH4VIY7 
PFAMH4VIY7 
ProdomH4VIY7 
UniProtKBE9Y1H4SubName: Full=H+ symporter family protein;
InterProE9Y1H4 
PFAME9Y1H4 
ProdomE9Y1H4 
UniProtKBE9YHD2SubName: Full=H+ symporter family protein {ECO:0000313|EMBL:EGB66186.1};
InterProE9YHD2 
PFAME9YHD2 
ProdomE9YHD2 
UniProtKBM9HQ97SubName: Full=DsdX permease;
InterProM9HQ97 
PFAMM9HQ97 
ProdomM9HQ97 
UniProtKBN1SJ52SubName: Full=DsdX permease;
InterProN1SJ52 
PFAMN1SJ52 
ProdomN1SJ52 
UniProtKBF9R4Q7SubName: Full=Permease DsdX;
InterProF9R4Q7 
PFAMF9R4Q7 
ProdomF9R4Q7 
UniProtKBG2BC33SubName: Full=DsdX permease;
InterProG2BC33 
PFAMG2BC33 
ProdomG2BC33 
UniProtKBN2GP46SubName: Full=DsdX permease;
InterProN2GP46 
PFAMN2GP46 
ProdomN2GP46 
UniProtKBH0QB09SubName: Full=Predicted transporter;
InterProH0QB09 
PFAMH0QB09 
ProdomH0QB09 
UniProtKBN2FQF3SubName: Full=DsdX permease;
InterProN2FQF3 
PFAMN2FQF3 
ProdomN2FQF3 
UniProtKBM8PRV0SubName: Full=DsdX permease;
InterProM8PRV0 
PFAMM8PRV0 
ProdomM8PRV0 
UniProtKBL3IE25SubName: Full=DsdX permease;
InterProL3IE25 
PFAML3IE25 
ProdomL3IE25 
UniProtKBI2Y857SubName: Full=DsdX permease;
InterProI2Y857 
PFAMI2Y857 
ProdomI2Y857 
UniProtKBC6UMM4SubName: Full=Predicted transporter;
InterProC6UMM4 
PFAMC6UMM4 
ProdomC6UMM4 
UniProtKBA0A069XSN2SubName: Full=DsdX permease {ECO:0000313|EMBL:KDU32878.1};
InterProA0A069XSN2 
PFAMA0A069XSN2 
ProdomA0A069XSN2 
UniProtKBA0A069Z913SubName: Full=DsdX permease {ECO:0000313|EMBL:KDU53805.1};
InterProA0A069Z913 
PFAMA0A069Z913 
ProdomA0A069Z913 
UniProtKBA0A070YIU4SubName: Full=DsdX permease {ECO:0000313|EMBL:KDX90364.1};
InterProA0A070YIU4 
PFAMA0A070YIU4 
ProdomA0A070YIU4 
UniProtKBA0A071AXT2SubName: Full=DsdX permease {ECO:0000313|EMBL:KDY61365.1};
InterProA0A071AXT2 
PFAMA0A071AXT2 
ProdomA0A071AXT2 
UniProtKBA0A071DKZ8SubName: Full=DsdX permease {ECO:0000313|EMBL:KDZ41887.1};
InterProA0A071DKZ8 
PFAMA0A071DKZ8 
ProdomA0A071DKZ8 
UniProtKBA0A073GQ99SubName: Full=DsdX permease {ECO:0000313|EMBL:KEJ67928.1};
InterProA0A073GQ99 
PFAMA0A073GQ99 
ProdomA0A073GQ99 
UniProtKBA0A073TIS0SubName: Full=DsdX permease {ECO:0000313|EMBL:KEL29081.1};
InterProA0A073TIS0 
PFAMA0A073TIS0 
ProdomA0A073TIS0 
UniProtKBA0A079DNP0SubName: Full=DsdX permease {ECO:0000313|EMBL:KDY24444.1};
InterProA0A079DNP0 
PFAMA0A079DNP0 
ProdomA0A079DNP0 
UniProtKBA0A079FCP9SubName: Full=DsdX permease {ECO:0000313|EMBL:KDY53899.1};
InterProA0A079FCP9 
PFAMA0A079FCP9 
ProdomA0A079FCP9 
UniProtKBM8NGF8SubName: Full=DsdX permease;
InterProM8NGF8 
PFAMM8NGF8 
ProdomM8NGF8 
UniProtKBM8NNZ9SubName: Full=DsdX permease;
InterProM8NNZ9 
PFAMM8NNZ9 
ProdomM8NNZ9 
UniProtKBC5W787SubName: Full=Gluconate transporter {ECO:0000313|EMBL:ACT28372.1};
InterProC5W787 
PFAMC5W787 
ProdomC5W787 
UniProtKBL3WU20SubName: Full=DsdX permease;
InterProL3WU20 
PFAML3WU20 
ProdomL3WU20 
UniProtKBL3ZRW5SubName: Full=DsdX permease;
InterProL3ZRW5 
PFAML3ZRW5 
ProdomL3ZRW5 
UniProtKBH4VZ57SubName: Full=DsdX permease;
InterProH4VZ57 
PFAMH4VZ57 
ProdomH4VZ57 
UniProtKBL8C4Y0SubName: Full=D-serine permease DsdX;
InterProL8C4Y0 
PFAML8C4Y0 
ProdomL8C4Y0 
UniProtKBL5G6A0SubName: Full=DsdX permease;
InterProL5G6A0 
PFAML5G6A0 
ProdomL5G6A0 
UniProtKBB1X9N8SubName: Full=Predicted transporter;
InterProB1X9N8 
PFAMB1X9N8 
ProdomB1X9N8 
UniProtKBL4WDG6SubName: Full=DsdX permease;
InterProL4WDG6 
PFAML4WDG6 
ProdomL4WDG6 
UniProtKBB3X9Z8SubName: Full=Transporter, gluconate:H+ symporter (GntP) family;
InterProB3X9Z8 
PFAMB3X9Z8 
ProdomB3X9Z8 
UniProtKBB5AXC5SubName: Full=Putative transporter {ECO:0000313|EMBL:ACG50161.1};
InterProB5AXC5 
PFAMB5AXC5 
ProdomB5AXC5 
UniProtKBM7ULW5SubName: Full=Putative transporter;
InterProM7ULW5 
PFAMM7ULW5 
ProdomM7ULW5 
UniProtKBA0A079G061SubName: Full=DsdX permease {ECO:0000313|EMBL:KDY67478.1};
InterProA0A079G061 
PFAMA0A079G061 
ProdomA0A079G061 
UniProtKBE9WHA8SubName: Full=H+ symporter family protein;
InterProE9WHA8 
PFAME9WHA8 
ProdomE9WHA8 
UniProtKBA0A080GQX8SubName: Full=DsdX permease {ECO:0000313|EMBL:KEN89353.1};
InterProA0A080GQX8 
PFAMA0A080GQX8 
ProdomA0A080GQX8 
UniProtKBG2EZC9SubName: Full=Permease DsdX;
InterProG2EZC9 
PFAMG2EZC9 
ProdomG2EZC9 
UniProtKBA0A0E1LZS4SubName: Full=D-serine transporter {ECO:0000313|EMBL:AJF57235.1};
InterProA0A0E1LZS4 
PFAMA0A0E1LZS4 
ProdomA0A0E1LZS4 
UniProtKBI2XE22SubName: Full=DsdX permease {ECO:0000313|EMBL:EII47242.1};
InterProI2XE22 
PFAMI2XE22 
ProdomI2XE22 
UniProtKBL3EVX4SubName: Full=DsdX permease;
InterProL3EVX4 
PFAML3EVX4 
ProdomL3EVX4 
UniProtKBL3UHE6SubName: Full=DsdX permease;
InterProL3UHE6 
PFAML3UHE6 
ProdomL3UHE6 
UniProtKBL4NZT3SubName: Full=DsdX permease;
InterProL4NZT3 
PFAML4NZT3 
ProdomL4NZT3 
UniProtKBL8CHD1SubName: Full=D-serine permease DsdX;
InterProL8CHD1 
PFAML8CHD1 
ProdomL8CHD1 
UniProtKBC4ZVQ2SubName: Full=Predicted transporter;
InterProC4ZVQ2 
PFAMC4ZVQ2 
ProdomC4ZVQ2 
UniProtKBL3VFL5SubName: Full=DsdX permease;
InterProL3VFL5 
PFAML3VFL5 
ProdomL3VFL5 
UniProtKBE3PEX2SubName: Full=Putative GntP family permease {ECO:0000313|EMBL:CBJ01988.1};
InterProE3PEX2 
PFAME3PEX2 
ProdomE3PEX2 
UniProtKBN2F862SubName: Full=DsdX permease;
InterProN2F862 
PFAMN2F862 
ProdomN2F862 
UniProtKBM9FVN1SubName: Full=DsdX permease;
InterProM9FVN1 
PFAMM9FVN1 
ProdomM9FVN1 
UniProtKBM8SL82SubName: Full=DsdX permease {ECO:0000313|EMBL:EMV57718.1};
InterProM8SL82 
PFAMM8SL82 
ProdomM8SL82 
UniProtKBA0A080I4G5SubName: Full=DsdX permease {ECO:0000313|EMBL:KEO23497.1};
InterProA0A080I4G5 
PFAMA0A080I4G5 
ProdomA0A080I4G5 
UniProtKBM8RJM2SubName: Full=DsdX permease;
InterProM8RJM2 
PFAMM8RJM2 
ProdomM8RJM2 
UniProtKBA0A0A0FCC8SubName: Full=DsdX permease {ECO:0000313|EMBL:KGM60434.1};
InterProA0A0A0FCC8 
PFAMA0A0A0FCC8 
ProdomA0A0A0FCC8 
UniProtKBL3VQW8SubName: Full=DsdX permease;
InterProL3VQW8 
PFAML3VQW8 
ProdomL3VQW8 
UniProtKBE1HSH8SubName: Full=DsdX permease {ECO:0000313|EMBL:EFK89143.1};
InterProE1HSH8 
PFAME1HSH8 
ProdomE1HSH8 
UniProtKBF4M5S8SubName: Full=Permease DsdX;
InterProF4M5S8 
PFAMF4M5S8 
ProdomF4M5S8 
UniProtKBA0A0E0U1L5SubName: Full=Permease DsdX {ECO:0000313|EMBL:AEE57527.1};
InterProA0A0E0U1L5 
PFAMA0A0E0U1L5 
ProdomA0A0E0U1L5 
UniProtKBK5FSL3SubName: Full=DsdX permease;
InterProK5FSL3 
PFAMK5FSL3 
ProdomK5FSL3 
UniProtKBL4KBX0SubName: Full=DsdX permease;
InterProL4KBX0 
PFAML4KBX0 
ProdomL4KBX0 
UniProtKBM8MME4SubName: Full=DsdX permease;
InterProM8MME4 
PFAMM8MME4 
ProdomM8MME4 
UniProtKBM8VUE5SubName: Full=DsdX permease;
InterProM8VUE5 
PFAMM8VUE5 
ProdomM8VUE5 
UniProtKBE9WVN9SubName: Full=H+ symporter family protein;
InterProE9WVN9 
PFAME9WVN9 
ProdomE9WVN9 
UniProtKBA8A2L9SubName: Full=Transporter, gluconate:H+ symporter (GntP) family;
InterProA8A2L9 
PFAMA8A2L9 
ProdomA8A2L9 
UniProtKBB1IX97SubName: Full=Gluconate transporter;
InterProB1IX97 
PFAMB1IX97 
ProdomB1IX97 
UniProtKBB2N4S7SubName: Full=Transporter, gluconate:H+ symporter (GntP) family;
InterProB2N4S7 
PFAMB2N4S7 
ProdomB2N4S7 
UniProtKBM7W930SubName: Full=Putative transporter;
InterProM7W930 
PFAMM7W930 
ProdomM7W930 
UniProtKBM8M2N0SubName: Full=DsdX permease;
InterProM8M2N0 
PFAMM8M2N0 
ProdomM8M2N0 
UniProtKBC6ELA3SubName: Full=Gluconate transporter {ECO:0000313|EMBL:ACT28372.1};
InterProC6ELA3 
PFAMC6ELA3 
ProdomC6ELA3 
UniProtKBC9QQH2SubName: Full=Gluconate transporter;SubName: Full=Permease DsdX;
InterProC9QQH2 
PFAMC9QQH2 
ProdomC9QQH2 
UniProtKBD8BWJ1SubName: Full=DsdX permease {ECO:0000313|EMBL:EFI88952.1};
InterProD8BWJ1 
PFAMD8BWJ1 
ProdomD8BWJ1 
UniProtKBM8SKA3SubName: Full=DsdX permease;
InterProM8SKA3 
PFAMM8SKA3 
ProdomM8SKA3 
UniProtKBE6BA33SubName: Full=DsdX permease {ECO:0000313|EMBL:EFU96251.1};
InterProE6BA33 
PFAME6BA33 
ProdomE6BA33 
UniProtKBH4WDE8SubName: Full=Gnt transporter;
InterProH4WDE8 
PFAMH4WDE8 
ProdomH4WDE8 
UniProtKBL3REE3SubName: Full=DsdX permease;
InterProL3REE3 
PFAML3REE3 
ProdomL3REE3 
UniProtKBL3QTJ7SubName: Full=DsdX permease;
InterProL3QTJ7 
PFAML3QTJ7 
ProdomL3QTJ7 
UniProtKBM8PSI8SubName: Full=DsdX permease;
InterProM8PSI8 
PFAMM8PSI8 
ProdomM8PSI8 
UniProtKBF4SH10SubName: Full=DsdX permease {ECO:0000313|EMBL:EGI12009.1};
InterProF4SH10 
PFAMF4SH10 
ProdomF4SH10 
UniProtKBN2HV89SubName: Full=DsdX permease;
InterProN2HV89 
PFAMN2HV89 
ProdomN2HV89 
UniProtKBH4ULY8SubName: Full=DsdX permease {ECO:0000313|EMBL:EHV56946.1};
InterProH4ULY8 
PFAMH4ULY8 
ProdomH4ULY8 
UniProtKBA0A0E1T1Y4SubName: Full=Transporter, gluconate:H+ symporter (GntP) family {ECO:0000313|EMBL:EDU65920.1};
InterProA0A0E1T1Y4 
PFAMA0A0E1T1Y4 
ProdomA0A0E1T1Y4 
UniProtKBA0A0G3HUR6SubName: Full=D-serine permease protein {ECO:0000313|EMBL:AKK15643.1};
InterProA0A0G3HUR6 
PFAMA0A0G3HUR6 
ProdomA0A0G3HUR6 
UniProtKBI2R0Z8SubName: Full=DsdX permease;
InterProI2R0Z8 
PFAMI2R0Z8 
ProdomI2R0Z8 
UniProtKBI4J3G1SubName: Full=DsdX permease {ECO:0000313|EMBL:EIF83770.1};
InterProI4J3G1 
PFAMI4J3G1 
ProdomI4J3G1 
UniProtKBK3IM48SubName: Full=DsdX permease;
InterProK3IM48 
PFAMK3IM48 
ProdomK3IM48 
UniProtKBM9CY51SubName: Full=DsdX permease;
InterProM9CY51 
PFAMM9CY51 
ProdomM9CY51