University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P09169.1
Original Database ID ref NP_415097.1
Organism Escherichia coli, Shigella sp., etc.
Annotation ompt_ecoli recname: full=protease
7; altname: full=omptin; altname:
full=outer m embrane protein 3b;
altname: full=protease a; altname:
full=protease ...
Sequence Length 317

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region21-317
Protein Length317
Template PDB Code1i78A
Template Region1-297
Sequence Identity99%
E-Value0
GA3411
MPQS2.04301
z-DOPE-0.21
TSVMod MethodMTALL
TSVMod RMSD0.355
TSVMod NO351
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1i78crystal structure of outer membrane protease ompt from escherichia coli ; EC: 3.4.21.87 ; PFAM: PF01278 ; SCOP: 66046
DBALI1i78A 
CATH2.40.128.90 Domain: 1i78A00 OMPT-like (100%)
JenaImageLibrary1i78 
Target Sequence
UniProtKBA0A0G3HVU6SubName: Full=DLP12 prophage outer membrane protease VII (Outer membrane protein 3b) protein {ECO:0000313|EMBL:AKK16870.1};
InterProA0A0G3HVU6 
PFAMA0A0G3HVU6 
ProdomA0A0G3HVU6 
UniProtKBG2F976SubName: Full=Outer membrane protease;EC=3.4.23.49;
InterProG2F976 
PFAMG2F976 
ProdomG2F976 
UniProtKBG2BJX7SubName: Full=Coagulase/fibrinolysin;EC=3.4.23.48;
InterProG2BJX7 
PFAMG2BJX7 
ProdomG2BJX7 
UniProtKBF9R5E1SubName: Full=Outer membrane protease;EC=3.4.23.49;
InterProF9R5E1 
PFAMF9R5E1 
ProdomF9R5E1 
UniProtKBC9R1F9SubName: Full=Outer membrane protease;SubName: Full=Plasminogen activator Pla;EC=3.4.23.48;Flags: Precursor;
InterProC9R1F9 
PFAMC9R1F9 
ProdomC9R1F9 
UniProtKBB1XGF9SubName: Full=DLP12 prophage; outer membrane protease VII (Outer membrane protein 3b);
InterProB1XGF9 
PFAMB1XGF9 
ProdomB1XGF9 
UniProtKBC6UCF7SubName: Full=Outer membrane protease VII (Outer membrane protein 3b);EC=3.4.23.49;
InterProC6UCF7 
PFAMC6UCF7 
ProdomC6UCF7 
UniProtKBI0ZP97SubName: Full=Outer membrane protease;
InterProI0ZP97 
PFAMI0ZP97 
ProdomI0ZP97 
UniProtKBC4ZV09SubName: Full=DLP12 prophage; outer membrane protease VII (Outer membrane protein 3b);
InterProC4ZV09 
PFAMC4ZV09 
ProdomC4ZV09 
UniProtKBA0A090HL93SubName: Full=Protease {ECO:0000313|EMBL:AKO56077.1};SubName: Full=Protease 7;EC=3.4.23.49;
InterProA0A090HL93 
PFAMA0A090HL93 
ProdomA0A090HL93 
UniProtKBL4CQ10SubName: Full=Protease 7;
InterProL4CQ10 
PFAML4CQ10 
ProdomL4CQ10 
UniProtKBW0FVP4SubName: Full=DLP12 prophage outer membrane protease VII (Outer membrane protein 3b) {ECO:0000313|EMBL:AHF27132.1};
InterProW0FVP4 
PFAMW0FVP4 
ProdomW0FVP4 
UniProtKBP09169RecName: Full=Protease 7;EC=3.4.23.49;AltName: Full=Omptin;AltName: Full=Outer membrane protein 3B;AltName: Full=Protease A;AltName: Full=Protease VII;Flags: Precursor;
InterProP09169 
PFAMP09169 
ProdomP09169 
UniProtKBM2PWW6SubName: Full=Outer membrane protease;EC=3.4.23.49;
InterProM2PWW6 
PFAMM2PWW6 
ProdomM2PWW6 
UniProtKBA0A5Q3TH93SubName: Full=Omptin family outer membrane protease OmpT {ECO:0000313|EMBL:QGL43934.1}EC=3.4.23.49 {ECO:0000313|EMBL:QGL43934.1}
InterProA0A5Q3TH93 
PFAMA0A5Q3TH93 
ProdomA0A5Q3TH93 
UniProtKBA0A656P2X8SubName: Full=Omptin family outer membrane protease OmpT {ECO:0000313|EMBL:HAV84481.1}
InterProA0A656P2X8 
PFAMA0A656P2X8 
ProdomA0A656P2X8 
UniProtKBC4ZV09SubName: Full=DLP12 prophage; outer membrane protease VII (Outer membrane protein 3b);
InterProC4ZV09 
PFAMC4ZV09 
ProdomC4ZV09 
UniProtKBC9R1F9SubName: Full=Outer membrane protease;SubName: Full=Plasminogen activator Pla;EC=3.4.23.48;Flags: Precursor;
InterProC9R1F9 
PFAMC9R1F9 
ProdomC9R1F9 
UniProtKBA0A839L2X5SubName: Full=Omptin family outer membrane protease OmpT {ECO:0000313|EMBL:MBB2410796.1}EC=3.4.23.49 {ECO:0000313|EMBL:MBB2410796.1}
InterProA0A839L2X5 
PFAMA0A839L2X5 
ProdomA0A839L2X5 
UniProtKBA0A8F9H950SubName: Full=Omptin family outer membrane protease OmpT {ECO:0000313|EMBL:QYE24712.1}EC=3.4.23.49 {ECO:0000313|EMBL:QYE24712.1}
InterProA0A8F9H950 
PFAMA0A8F9H950 
ProdomA0A8F9H950 
UniProtKBA0A8F8DK85SubName: Full=Omptin family outer membrane protease OmpT {ECO:0000313|EMBL:QXZ35870.1}EC=3.4.23.49 {ECO:0000313|EMBL:QXZ35870.1}
InterProA0A8F8DK85 
PFAMA0A8F8DK85 
ProdomA0A8F8DK85 
UniProtKBA0A1V2GBI0SubName: Full=Omptin family outer membrane protease OmpT {ECO:0000313|EMBL:EAC1485151.1}EC=3.4.23.49 {ECO:0000313|EMBL:NAP34933.1, ECO:0000313|EMBL:SRA04019.1}SubName: Full=Outer membrane protease {EC
InterProA0A1V2GBI0 
PFAMA0A1V2GBI0 
ProdomA0A1V2GBI0 
UniProtKBB1XGF9SubName: Full=DLP12 prophage; outer membrane protease VII (Outer membrane protein 3b);
InterProB1XGF9 
PFAMB1XGF9 
ProdomB1XGF9 
UniProtKBA0A8A5GYJ7SubName: Full=Omptin family outer membrane protease OmpT {ECO:0000313|EMBL:QTF23258.1}EC=3.4.23.49 {ECO:0000313|EMBL:QTF23258.1}
InterProA0A8A5GYJ7 
PFAMA0A8A5GYJ7 
ProdomA0A8A5GYJ7 
UniProtKBF9R5E1SubName: Full=Outer membrane protease;EC=3.4.23.49;
InterProF9R5E1 
PFAMF9R5E1 
ProdomF9R5E1 
UniProtKBG2BJX7SubName: Full=Coagulase/fibrinolysin;EC=3.4.23.48;
InterProG2BJX7 
PFAMG2BJX7 
ProdomG2BJX7 
UniProtKBC6UCF7SubName: Full=Outer membrane protease VII (Outer membrane protein 3b);EC=3.4.23.49;
InterProC6UCF7 
PFAMC6UCF7 
ProdomC6UCF7 
UniProtKBG2F976SubName: Full=Outer membrane protease;EC=3.4.23.49;
InterProG2F976 
PFAMG2F976 
ProdomG2F976 
UniProtKBA0A7Z7YM80SubName: Full=Omptin family outer membrane protease OmpT {ECO:0000313|EMBL:TBR52563.1}EC=3.4.23.49 {ECO:0000313|EMBL:TBR52563.1}
InterProA0A7Z7YM80 
PFAMA0A7Z7YM80 
ProdomA0A7Z7YM80 
UniProtKBI0ZP97SubName: Full=Outer membrane protease;
InterProI0ZP97 
PFAMI0ZP97 
ProdomI0ZP97 
UniProtKBP09169.1OMPT_ECOLI RecName: Full=Protease 7; AltName: Full=Omptin; AltName: Full=Outer membrane protein 3B; AltName: Full=Protease A; AltName: Full=Protease VII; Flags: Precursor
InterProP09169.1 
PFAMP09169.1 
ProdomP09169.1 
UniProtKBP09169RecName: Full=Protease 7;EC=3.4.23.49;AltName: Full=Omptin;AltName: Full=Outer membrane protein 3B;AltName: Full=Protease A;AltName: Full=Protease VII;Flags: Precursor;
InterProP09169 
PFAMP09169 
ProdomP09169 
RefSeqYP_003043743.1 outer membrane protease [Escherichia coli B str. REL606]
RefSeqAP_001210.1 outer membrane protease VII [Escherichia coli str. K-12 substr. W3110]
RefSeqZP_06934864.1 outer membrane protease [Escherichia coli OP50]
RefSeqYP_002925638.1 DLP12 prophage; outer membrane protease VII (outer membrane protein 3b) [Escherichia coli BW2952]
RefSeqYP_001729565.1 DLP12 prophage; outer membrane protease VII (outer membrane protein 3b) [Escherichia coli str. K-12 substr. DH10B]
RefSeqYP_001729464.1 DLP12 prophage; outer membrane protease VII (outer membrane protein 3b) [Escherichia coli str. K-12 substr. DH10B]
RefSeqNP_415097.1 DLP12 prophage; outer membrane protease VII (outer membrane protein 3b) [Escherichia coli str. K-12 substr. MG1655]
GenPept899721588protease
GenPept899725944protease
GenPept899730315protease
GenPept932858456Protease VII (Omptin) precursor
GenPept254160635 outer membrane protease [Escherichia coli B str. REL606]
GenPept89107430 outer membrane protease VII [Escherichia coli str. K-12 substr. W3110]
GenPept129161OMPT_ECOLI RecName: Full=Protease 7; AltName: Full=Omptin; AltName: Full=Outer membrane protein 3B; AltName: Full=Protease A; AltName: Full=Protease VII; Flags: Precursor
GenPept42166unnamed protein product
GenPept549812084DLP12 prophage; outer membrane protease VII (outer membrane protein 3b)
GenPept557270956outer membrane protease
GenPept571053676DLP12 prophage; outer membrane protease VII (outer membrane protein 3b)
GenPept664682983protease
GenPept682118128DLP12 prophage; outer membrane protease VII (outer membrane protein 3b)
GenPept687671493outer membrane protease VII (outer membrane protein 3b)
GenPept687675754outer membrane protease VII (outer membrane protein 3b)
GenPept730585795DLP12 prophage; outer membrane protease VII (outer membrane protein 3b)
GenPept731473524DLP12 prophage; outer membrane protease VII (outer membrane protein 3b)
GenPept315135230outer membrane protease
GenPept297516478 outer membrane protease [Escherichia coli OP50]
GenPept260450270Plasminogen activator Pla
GenPept147377protease
GenPept16128548 DLP12 prophage; outer membrane protease VII (outer membrane protein 3b) [Escherichia coli str. K-12 substr. MG1655]
GenPept169887979DLP12 prophage; outer membrane protease VII (outer membrane protein 3b)
GenPept169888080DLP12 prophage; outer membrane protease VII (outer membrane protein 3b)
GenPept170080144 DLP12 prophage; outer membrane protease VII (outer membrane protein 3b) [Escherichia coli str. K-12 substr. DH10B]
GenPept1778478protease VII precursor
GenPept1786777DLP12 prophage; outer membrane protease VII; outer membrane protein 3b
GenPept238860792DLP12 prophage; outer membrane protease VII (outer membrane protein 3b)
GenPept238899842 DLP12 prophage; outer membrane protease VII (outer membrane protein 3b) [Escherichia coli BW2952]
GenPept253972536outer membrane protease VII (outer membrane protein 3b)
GenPept170080245 DLP12 prophage; outer membrane protease VII (outer membrane protein 3b) [Escherichia coli str. K-12 substr. DH10B]
GenPept78789A31387 omptin (EC 3.4.21.87) precursor - Escherichia coli
GenPept802134142DLP12 prophage; outer membrane protease VII (outer membrane protein 3b)
GenPept808716868protease
GenPept808721238protease
GenPept808729559protease
GenPept808733970protease
GenPept817573903DLP12 prophage, outer membrane protease VII, outer membrane protein 3b
GenPept817578045DLP12 prophage, outer membrane protease VII, outer membrane protein 3b
GenPept817582184DLP12 prophage, outer membrane protease VII, outer membrane protein 3b
GenPept817586325DLP12 prophage, outer membrane protease VII, outer membrane protein 3b
GenPept817590466DLP12 prophage, outer membrane protease VII, outer membrane protein 3b
GenPept827617552DLP12 prophage outer membrane protease VII (outer membrane protein 3b) protein
GenPept827621136DLP12 prophage outer membrane protease VII (outer membrane protein 3b) protein
GenPept808712457protease
GenPept808708092protease
GenPept808699342protease
GenPept732685488protease
GenPept85674700outer membrane protease VII
GenPept808703713protease
GenBankAAC73666.1 DLP12 prophage; outer membrane protease VII (outer membrane protein 3b) [Escherichia coli str. K-12 substr. MG1655]
GenBankACX40692.1 Plasminogen activator Pla [Escherichia coli DH1]
GenBankACT38207.1 outer membrane protease VII (outer membrane protein 3b) [Escherichia coli B str. REL606]
GenBankAAA24430.1 protease [Escherichia coli str. K-12 substr. W3110]
GenBankACB01787.1 DLP12 prophage; outer membrane protease VII (outer membrane protein 3b) [Escherichia coli str. K-12 substr. DH10B]
GenBankAAB40761.1 protease VII precursor [Escherichia coli]
GenBankACB01686.1 DLP12 prophage; outer membrane protease VII (outer membrane protein 3b) [Escherichia coli str. K-12 substr. DH10B]
GenBankACR62790.1 DLP12 prophage; outer membrane protease VII (outer membrane protein 3b) [Escherichia coli BW2952]
EMBLCAA30008.1