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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A0A024KQG6
Original Database ID ref NP_417160.1
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation recname: full=protein nrdi {eco:0000256|hamap-rule:mf_00128,
eco:0000256|saas:sa as00020464};
Sequence Length 136

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region3-133
Protein Length136
Template PDB Code3n3aC
Template Region3-133
Sequence Identity100%
E-Value0
GA3411
MPQS2.32644
z-DOPE-2.76
TSVMod MethodMSALL
TSVMod RMSD0.522
TSVMod NO350.952
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3n3aribonucleotide reductase dimanganese(ii)-nrdf from escherichia coli in complex with reduced nrdi
DBALI3n3aC 
JenaImageLibrary3n3a 
Target Sequence
UniProtKBC6UC29RecName: Full=Protein NrdI;
InterProC6UC29 
PFAMC6UC29 
ProdomC6UC29 
UniProtKBA0A029HQ22RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A029HQ22 
PFAMA0A029HQ22 
ProdomA0A029HQ22 
UniProtKBA0A029ILB5RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A029ILB5 
PFAMA0A029ILB5 
ProdomA0A029ILB5 
UniProtKBA0A069YRG2RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A069YRG2 
PFAMA0A069YRG2 
ProdomA0A069YRG2 
UniProtKBA0A070FH08RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A070FH08 
PFAMA0A070FH08 
ProdomA0A070FH08 
UniProtKBA0A070SRM3RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A070SRM3 
PFAMA0A070SRM3 
ProdomA0A070SRM3 
UniProtKBA0A070UWM0RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A070UWM0 
PFAMA0A070UWM0 
ProdomA0A070UWM0 
UniProtKBA0A073H134RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A073H134 
PFAMA0A073H134 
ProdomA0A073H134 
UniProtKBA0A074HQA7RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A074HQA7 
PFAMA0A074HQA7 
ProdomA0A074HQA7 
UniProtKBA0A079FXB2RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A079FXB2 
PFAMA0A079FXB2 
ProdomA0A079FXB2 
UniProtKBA0A079Y9Y3RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A079Y9Y3 
PFAMA0A079Y9Y3 
ProdomA0A079Y9Y3 
UniProtKBA0A028BR44RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A028BR44 
PFAMA0A028BR44 
ProdomA0A028BR44 
UniProtKBA0A028A6G2RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A028A6G2 
PFAMA0A028A6G2 
ProdomA0A028A6G2 
UniProtKBA8A3F6RecName: Full=Protein NrdI;
InterProA8A3F6 
PFAMA8A3F6 
ProdomA8A3F6 
UniProtKBC3SYA2RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProC3SYA2 
PFAMC3SYA2 
ProdomC3SYA2 
UniProtKBD2AHM1RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProD2AHM1 
PFAMD2AHM1 
ProdomD2AHM1 
UniProtKBD2NLI7RecName: Full=Protein NrdI;
InterProD2NLI7 
PFAMD2NLI7 
ProdomD2NLI7 
UniProtKBD3QPM7RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProD3QPM7 
PFAMD3QPM7 
ProdomD3QPM7 
UniProtKBC8UEN2RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProC8UEN2 
PFAMC8UEN2 
ProdomC8UEN2 
UniProtKBD7ZVI6RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProD7ZVI6 
PFAMD7ZVI6 
ProdomD7ZVI6 
UniProtKBD7XZG9RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProD7XZG9 
PFAMD7XZG9 
ProdomD7XZG9 
UniProtKBD8AGL3RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProD8AGL3 
PFAMD8AGL3 
ProdomD8AGL3 
UniProtKBD7XUM7RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProD7XUM7 
PFAMD7XUM7 
ProdomD7XUM7 
UniProtKBB3BN63RecName: Full=Protein NrdI;
InterProB3BN63 
PFAMB3BN63 
ProdomB3BN63 
UniProtKBA0A080I472RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A080I472 
PFAMA0A080I472 
ProdomA0A080I472 
UniProtKBA0A080ILY2RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A080ILY2 
PFAMA0A080ILY2 
ProdomA0A080ILY2 
UniProtKBB3ANE7RecName: Full=Protein NrdI;
InterProB3ANE7 
PFAMB3ANE7 
ProdomB3ANE7 
UniProtKBB2NRN1RecName: Full=Protein NrdI;
InterProB2NRN1 
PFAMB2NRN1 
ProdomB2NRN1 
UniProtKBB1XCL1RecName: Full=Protein NrdI;
InterProB1XCL1 
PFAMB1XCL1 
ProdomB1XCL1 
UniProtKBB1IUZ9RecName: Full=Protein NrdI;
InterProB1IUZ9 
PFAMB1IUZ9 
ProdomB1IUZ9 
UniProtKBB3WLU8RecName: Full=Protein NrdI;
InterProB3WLU8 
PFAMB3WLU8 
ProdomB3WLU8 
UniProtKBB3HQ09RecName: Full=Protein NrdI;
InterProB3HQ09 
PFAMB3HQ09 
ProdomB3HQ09 
UniProtKBB7MYX8RecName: Full=Protein NrdI;
InterProB7MYX8 
PFAMB7MYX8 
ProdomB7MYX8 
UniProtKBB7LW06RecName: Full=Protein NrdI;
InterProB7LW06 
PFAMB7LW06 
ProdomB7LW06 
UniProtKBC2DX46RecName: Full=Protein NrdI;
InterProC2DX46 
PFAMC2DX46 
ProdomC2DX46 
UniProtKBC5W7Z0SubName: Full=NrdI protein {ECO:0000313|EMBL:ACT28111.1};
InterProC5W7Z0 
PFAMC5W7Z0 
ProdomC5W7Z0 
UniProtKBB2P9R8RecName: Full=Protein NrdI;
InterProB2P9R8 
PFAMB2P9R8 
ProdomB2P9R8 
UniProtKBB2PF52RecName: Full=Protein NrdI;
InterProB2PF52 
PFAMB2PF52 
ProdomB2PF52 
UniProtKBB2N1K2RecName: Full=Protein NrdI;
InterProB2N1K2 
PFAMB2N1K2 
ProdomB2N1K2 
UniProtKBA0A0A8UI79RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A0A8UI79 
PFAMA0A0A8UI79 
ProdomA0A0A8UI79 
UniProtKBA0A0C7MIL2RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A0C7MIL2 
PFAMA0A0C7MIL2 
ProdomA0A0C7MIL2 
UniProtKBA0A0E2U929RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A0E2U929 
PFAMA0A0E2U929 
ProdomA0A0E2U929 
UniProtKBA0A0E3N0Q9RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A0E3N0Q9 
PFAMA0A0E3N0Q9 
ProdomA0A0E3N0Q9 
UniProtKBA0A0F6EGD3RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A0F6EGD3 
PFAMA0A0F6EGD3 
ProdomA0A0F6EGD3 
UniProtKBA0A0F6FB41RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A0F6FB41 
PFAMA0A0F6FB41 
ProdomA0A0F6FB41 
UniProtKBA0A0G2XFN1RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128};
InterProA0A0G2XFN1 
PFAMA0A0G2XFN1 
ProdomA0A0G2XFN1 
UniProtKBA0A0G3HTX8RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128};
InterProA0A0G3HTX8 
PFAMA0A0G3HTX8 
ProdomA0A0G3HTX8 
UniProtKBA0A0G3KPJ0RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128};
InterProA0A0G3KPJ0 
PFAMA0A0G3KPJ0 
ProdomA0A0G3KPJ0 
UniProtKBA0A0H3EMJ4RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128};
InterProA0A0H3EMJ4 
PFAMA0A0H3EMJ4 
ProdomA0A0H3EMJ4 
UniProtKBC6EJV1SubName: Full=NrdI protein {ECO:0000313|EMBL:ACT28111.1};
InterProC6EJV1 
PFAMC6EJV1 
ProdomC6EJV1 
UniProtKBC4ZYS6RecName: Full=Protein NrdI;
InterProC4ZYS6 
PFAMC4ZYS6 
ProdomC4ZYS6 
UniProtKBA0A024KQG6RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A024KQG6 
PFAMA0A024KQG6 
ProdomA0A024KQG6 
UniProtKBD8AP37RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProD8AP37 
PFAMD8AP37 
ProdomD8AP37 
UniProtKBA0A027U7J6RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A027U7J6 
PFAMA0A027U7J6 
ProdomA0A027U7J6 
UniProtKBA0A029L3E2RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A029L3E2 
PFAMA0A029L3E2 
ProdomA0A029L3E2 
UniProtKBA0A071C9M5RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A071C9M5 
PFAMA0A071C9M5 
ProdomA0A071C9M5 
UniProtKBA0A080EJ88RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A080EJ88 
PFAMA0A080EJ88 
ProdomA0A080EJ88 
UniProtKBA0A0E1SZC8RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A0E1SZC8 
PFAMA0A0E1SZC8 
ProdomA0A0E1SZC8 
UniProtKBA0A0F6GRG6RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A0F6GRG6 
PFAMA0A0F6GRG6 
ProdomA0A0F6GRG6 
UniProtKBA0A0H3X877SubName: Full=Protein that stimulates ribonucleotide reduction {ECO:0000313|EMBL:AKM36202.1};
InterProA0A0H3X877 
PFAMA0A0H3X877 
ProdomA0A0H3X877 
UniProtKBB3B3X3RecName: Full=Protein NrdI;
InterProB3B3X3 
PFAMB3B3X3 
ProdomB3B3X3 
UniProtKBB6I665RecName: Full=Protein NrdI;
InterProB6I665 
PFAMB6I665 
ProdomB6I665 
UniProtKBD6HZY9RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProD6HZY9 
PFAMD6HZY9 
ProdomD6HZY9 
UniProtKBC6URL2RecName: Full=Protein NrdI;
InterProC6URL2 
PFAMC6URL2 
ProdomC6URL2 
UniProtKBB5Z288RecName: Full=Protein NrdI;
InterProB5Z288 
PFAMB5Z288 
ProdomB5Z288 
UniProtKBA0A025GJT3RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A025GJT3 
PFAMA0A025GJT3 
ProdomA0A025GJT3 
UniProtKBB3X113RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProB3X113 
PFAMB3X113 
ProdomB3X113 
UniProtKBA0A026HD87RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A026HD87 
PFAMA0A026HD87 
ProdomA0A026HD87 
UniProtKBA0A0E0U238RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A0E0U238 
PFAMA0A0E0U238 
ProdomA0A0E0U238 
UniProtKBB3IBM0RecName: Full=Protein NrdI;
InterProB3IBM0 
PFAMB3IBM0 
ProdomB3IBM0 
UniProtKBC9R0W7RecName: Full=Protein NrdI;
InterProC9R0W7 
PFAMC9R0W7 
ProdomC9R0W7 
UniProtKBA0A026RUP5RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A026RUP5 
PFAMA0A026RUP5 
ProdomA0A026RUP5 
UniProtKBA0A071BVE1RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A071BVE1 
PFAMA0A071BVE1 
ProdomA0A071BVE1 
UniProtKBA0A0E1M0C8RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A0E1M0C8 
PFAMA0A0E1M0C8 
ProdomA0A0E1M0C8 
UniProtKBA0A0H3PIS4RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128};
InterProA0A0H3PIS4 
PFAMA0A0H3PIS4 
ProdomA0A0H3PIS4 
UniProtKBB6ZWE5RecName: Full=Protein NrdI;
InterProB6ZWE5 
PFAMB6ZWE5 
ProdomB6ZWE5 
UniProtKBC8TFS2RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProC8TFS2 
PFAMC8TFS2 
ProdomC8TFS2 
UniProtKBA0A0E1ZSN9RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A0E1ZSN9 
PFAMA0A0E1ZSN9 
ProdomA0A0E1ZSN9 
UniProtKBA0A0F6C7Z9RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A0F6C7Z9 
PFAMA0A0F6C7Z9 
ProdomA0A0F6C7Z9 
UniProtKBA0A0F6MGA9RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A0F6MGA9 
PFAMA0A0F6MGA9 
ProdomA0A0F6MGA9 
UniProtKBA0A0G3JLG7RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128};
InterProA0A0G3JLG7 
PFAMA0A0G3JLG7 
ProdomA0A0G3JLG7 
UniProtKBA0A0H4RX57SubName: Full=Ribonucleotide reductase stimulatory protein {ECO:0000313|EMBL:AKP85505.1};
InterProA0A0H4RX57 
PFAMA0A0H4RX57 
ProdomA0A0H4RX57 
UniProtKBB2U069RecName: Full=Protein NrdI;
InterProB2U069 
PFAMB2U069 
ProdomB2U069 
UniProtKBB3A6R7RecName: Full=Protein NrdI;
InterProB3A6R7 
PFAMB3A6R7 
ProdomB3A6R7 
UniProtKBB1LPE9RecName: Full=Protein NrdI;
InterProB1LPE9 
PFAMB1LPE9 
ProdomB1LPE9 
UniProtKBB3XIP8RecName: Full=Protein NrdI;
InterProB3XIP8 
PFAMB3XIP8 
ProdomB3XIP8 
UniProtKBC1NCM6RecName: Full=Protein nrdI;
InterProC1NCM6 
PFAMC1NCM6 
ProdomC1NCM6 
UniProtKBA0A094NG94SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CDX08121.1};
InterProA0A094NG94 
PFAMA0A094NG94 
ProdomA0A094NG94 
UniProtKBA0A080GL02RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A080GL02 
PFAMA0A080GL02 
ProdomA0A080GL02 
UniProtKBA0A079DC98RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A079DC98 
PFAMA0A079DC98 
ProdomA0A079DC98 
UniProtKBB3BZD6RecName: Full=Protein NrdI;
InterProB3BZD6 
PFAMB3BZD6 
ProdomB3BZD6 
UniProtKBD6ICA9RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProD6ICA9 
PFAMD6ICA9 
ProdomD6ICA9 
UniProtKBD7Z1V3RecName: Full=Protein NrdI;
InterProD7Z1V3 
PFAMD7Z1V3 
ProdomD7Z1V3 
UniProtKBC8U9A7RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProC8U9A7 
PFAMC8U9A7 
ProdomC8U9A7 
UniProtKBA0A027YZU8RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A027YZU8 
PFAMA0A027YZU8 
ProdomA0A027YZU8 
UniProtKBA0A028EBT6RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A028EBT6 
PFAMA0A028EBT6 
ProdomA0A028EBT6 
UniProtKBA0A062Y621RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A062Y621 
PFAMA0A062Y621 
ProdomA0A062Y621 
UniProtKBA0A070KIX3RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A070KIX3 
PFAMA0A070KIX3 
ProdomA0A070KIX3 
UniProtKBA0A071D476RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProA0A071D476 
PFAMA0A071D476 
ProdomA0A071D476 
UniProtKBB3HDM3RecName: Full=Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464};
InterProB3HDM3 
PFAMB3HDM3 
ProdomB3HDM3