University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A0A023YW48
Original Database ID ref NP_415764.4
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation recname: full=upf0263 protein
yciu {eco:0000256|hamap-rule:mf_00680};
Sequence Length 109

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region6-109
Protein Length109
Template PDB Code1nnvA
Template Region5-107
Sequence Identity48%
E-Value0
GA3411
MPQS1.54983
z-DOPE-0.65
TSVMod MethodMTALL
TSVMod RMSD0.308
TSVMod NO351
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1nnvthe solution structure of hi1450
DBALI1nnvA 
CATH3.10.450.140 Domain: 1nnvA01 Putative dsDNA mimic (100%)
JenaImageLibrary1nnv 
Target Sequence
UniProtKBB2NWP0RecName: Full=UPF0263 protein YciU;
InterProB2NWP0 
PFAMB2NWP0 
ProdomB2NWP0 
UniProtKBA0A028C723RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A028C723 
PFAMA0A028C723 
ProdomA0A028C723 
UniProtKBA0A028E5H0RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A028E5H0 
PFAMA0A028E5H0 
ProdomA0A028E5H0 
UniProtKBA0A029KXF7RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A029KXF7 
PFAMA0A029KXF7 
ProdomA0A029KXF7 
UniProtKBA0A029LPX3RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A029LPX3 
PFAMA0A029LPX3 
ProdomA0A029LPX3 
UniProtKBA0A029PNS4RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A029PNS4 
PFAMA0A029PNS4 
ProdomA0A029PNS4 
UniProtKBA0A062YD35RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A062YD35 
PFAMA0A062YD35 
ProdomA0A062YD35 
UniProtKBA0A070DJ17RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A070DJ17 
PFAMA0A070DJ17 
ProdomA0A070DJ17 
UniProtKBA0A070DQN7RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A070DQN7 
PFAMA0A070DQN7 
ProdomA0A070DQN7 
UniProtKBA0A070KL85RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A070KL85 
PFAMA0A070KL85 
ProdomA0A070KL85 
UniProtKBA0A070NXM9RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A070NXM9 
PFAMA0A070NXM9 
ProdomA0A070NXM9 
UniProtKBA0A027U4C4RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A027U4C4 
PFAMA0A027U4C4 
ProdomA0A027U4C4 
UniProtKBA0A026V7N2RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A026V7N2 
PFAMA0A026V7N2 
ProdomA0A026V7N2 
UniProtKBA7ZL19RecName: Full=UPF0263 protein YciU;
InterProA7ZL19 
PFAMA7ZL19 
ProdomA7ZL19 
UniProtKBB1LH52RecName: Full=UPF0263 protein YciU;
InterProB1LH52 
PFAMB1LH52 
ProdomB1LH52 
UniProtKBB3BA25RecName: Full=UPF0263 protein YciU;
InterProB3BA25 
PFAMB3BA25 
ProdomB3BA25 
UniProtKBB3BI94RecName: Full=UPF0263 protein YciU;
InterProB3BI94 
PFAMB3BI94 
ProdomB3BI94 
UniProtKBB3C1T5RecName: Full=UPF0263 protein YciU;
InterProB3C1T5 
PFAMB3C1T5 
ProdomB3C1T5 
UniProtKBB3ADH1RecName: Full=UPF0263 protein YciU;
InterProB3ADH1 
PFAMB3ADH1 
ProdomB3ADH1 
UniProtKBB3XBX2RecName: Full=UPF0263 protein YciU;
InterProB3XBX2 
PFAMB3XBX2 
ProdomB3XBX2 
UniProtKBB3IMR0RecName: Full=UPF0263 protein YciU;
InterProB3IMR0 
PFAMB3IMR0 
ProdomB3IMR0 
UniProtKBB3Y0C5RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProB3Y0C5 
PFAMB3Y0C5 
ProdomB3Y0C5 
UniProtKBB3I8D9RecName: Full=UPF0263 protein YciU;
InterProB3I8D9 
PFAMB3I8D9 
ProdomB3I8D9 
UniProtKBA7ZZI4RecName: Full=UPF0263 protein YciU;
InterProA7ZZI4 
PFAMA7ZZI4 
ProdomA7ZZI4 
UniProtKBA0A070U153RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A070U153 
PFAMA0A070U153 
ProdomA0A070U153 
UniProtKBA0A070UYB8RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A070UYB8 
PFAMA0A070UYB8 
ProdomA0A070UYB8 
UniProtKBA0A0A8UBK8RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A0A8UBK8 
PFAMA0A0A8UBK8 
ProdomA0A0A8UBK8 
UniProtKBA0A0E0Y3J5RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A0E0Y3J5 
PFAMA0A0E0Y3J5 
ProdomA0A0E0Y3J5 
UniProtKBA0A0E1LWG5RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A0E1LWG5 
PFAMA0A0E1LWG5 
ProdomA0A0E1LWG5 
UniProtKBA0A0E1ZUW8RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A0E1ZUW8 
PFAMA0A0E1ZUW8 
ProdomA0A0E1ZUW8 
UniProtKBA0A0E2TQY3RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A0E2TQY3 
PFAMA0A0E2TQY3 
ProdomA0A0E2TQY3 
UniProtKBA0A0G3JBQ6RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A0G3JBQ6 
PFAMA0A0G3JBQ6 
ProdomA0A0G3JBQ6 
UniProtKBA0A0G3K438RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A0G3K438 
PFAMA0A0G3K438 
ProdomA0A0G3K438 
UniProtKBA0A0H3PPC0RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A0H3PPC0 
PFAMA0A0H3PPC0 
ProdomA0A0H3PPC0 
UniProtKBA0A0H3X814SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKM34801.1};
InterProA0A0H3X814 
PFAMA0A0H3X814 
ProdomA0A0H3X814 
UniProtKBA0A0J3W0C7SubName: Full=DsDNA-mimic protein {ECO:0000313|EMBL:KME71018.1};
InterProA0A0J3W0C7 
PFAMA0A0J3W0C7 
ProdomA0A0J3W0C7 
UniProtKBA0A0A0F9R4RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A0A0F9R4 
PFAMA0A0A0F9R4 
ProdomA0A0A0F9R4 
UniProtKBA0A080I8T7RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A080I8T7 
PFAMA0A080I8T7 
ProdomA0A080I8T7 
UniProtKBA0A080GP28RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A080GP28 
PFAMA0A080GP28 
ProdomA0A080GP28 
UniProtKBA0A071ALM7RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A071ALM7 
PFAMA0A071ALM7 
ProdomA0A071ALM7 
UniProtKBA0A071BS11RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A071BS11 
PFAMA0A071BS11 
ProdomA0A071BS11 
UniProtKBA0A073GX24RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A073GX24 
PFAMA0A073GX24 
ProdomA0A073GX24 
UniProtKBA0A073HKH4RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A073HKH4 
PFAMA0A073HKH4 
ProdomA0A073HKH4 
UniProtKBA0A073UME1RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A073UME1 
PFAMA0A073UME1 
ProdomA0A073UME1 
UniProtKBA0A074HZK7RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A074HZK7 
PFAMA0A074HZK7 
ProdomA0A074HZK7 
UniProtKBA0A079CY23RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A079CY23 
PFAMA0A079CY23 
ProdomA0A079CY23 
UniProtKBA0A079FBX8RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A079FBX8 
PFAMA0A079FBX8 
ProdomA0A079FBX8 
UniProtKBA0A079GSP2RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A079GSP2 
PFAMA0A079GSP2 
ProdomA0A079GSP2 
UniProtKBA0A079YGB9RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A079YGB9 
PFAMA0A079YGB9 
ProdomA0A079YGB9 
UniProtKBB2NBY5RecName: Full=UPF0263 protein YciU;
InterProB2NBY5 
PFAMB2NBY5 
ProdomB2NBY5 
UniProtKBB1XAT8RecName: Full=UPF0263 protein YciU;
InterProB1XAT8 
PFAMB1XAT8 
ProdomB1XAT8 
UniProtKBA0A023YW48RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A023YW48 
PFAMA0A023YW48 
ProdomA0A023YW48 
UniProtKBB5YYF3RecName: Full=UPF0263 protein YciU;
InterProB5YYF3 
PFAMB5YYF3 
ProdomB5YYF3 
UniProtKBA0A026GXJ3RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A026GXJ3 
PFAMA0A026GXJ3 
ProdomA0A026GXJ3 
UniProtKBA0A029I573RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A029I573 
PFAMA0A029I573 
ProdomA0A029I573 
UniProtKBA0A069XSJ1RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A069XSJ1 
PFAMA0A069XSJ1 
ProdomA0A069XSJ1 
UniProtKBA0A070PM24RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A070PM24 
PFAMA0A070PM24 
ProdomA0A070PM24 
UniProtKBA0A073FWX5RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A073FWX5 
PFAMA0A073FWX5 
ProdomA0A073FWX5 
UniProtKBA0A074I6J6RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A074I6J6 
PFAMA0A074I6J6 
ProdomA0A074I6J6 
UniProtKBA0A080FL20RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A080FL20 
PFAMA0A080FL20 
ProdomA0A080FL20 
UniProtKBA0A0E0TX70RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A0E0TX70 
PFAMA0A0E0TX70 
ProdomA0A0E0TX70 
UniProtKBA0A0F6F5C9RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A0F6F5C9 
PFAMA0A0F6F5C9 
ProdomA0A0F6F5C9 
UniProtKBB3HCF0RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProB3HCF0 
PFAMB3HCF0 
ProdomB3HCF0 
UniProtKBB2P9H3RecName: Full=UPF0263 protein YciU;
InterProB2P9H3 
PFAMB2P9H3 
ProdomB2P9H3 
UniProtKBA0A0F6C3C8RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A0F6C3C8 
PFAMA0A0F6C3C8 
ProdomA0A0F6C3C8 
UniProtKBA0A024KUS0RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A024KUS0 
PFAMA0A024KUS0 
ProdomA0A024KUS0 
UniProtKBA0A0E2U1L4RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A0E2U1L4 
PFAMA0A0E2U1L4 
ProdomA0A0E2U1L4 
UniProtKBA0A025C7Y9RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A025C7Y9 
PFAMA0A025C7Y9 
ProdomA0A025C7Y9 
UniProtKBA0A071C8B0RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A071C8B0 
PFAMA0A071C8B0 
ProdomA0A071C8B0 
UniProtKBA0A0E3N091RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A0E3N091 
PFAMA0A0E3N091 
ProdomA0A0E3N091 
UniProtKBB3AVM3RecName: Full=UPF0263 protein YciU;
InterProB3AVM3 
PFAMB3AVM3 
ProdomB3AVM3 
UniProtKBA0A025FNG7RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A025FNG7 
PFAMA0A025FNG7 
ProdomA0A025FNG7 
UniProtKBA0A064SQ31RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A064SQ31 
PFAMA0A064SQ31 
ProdomA0A064SQ31 
UniProtKBA0A071DII5RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A071DII5 
PFAMA0A071DII5 
ProdomA0A071DII5 
UniProtKBA0A080EQ30RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A080EQ30 
PFAMA0A080EQ30 
ProdomA0A080EQ30 
UniProtKBA0A0H4SCE5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKP83968.1};
InterProA0A0H4SCE5 
PFAMA0A0H4SCE5 
ProdomA0A0H4SCE5 
UniProtKBB2PTB6RecName: Full=UPF0263 protein YciU;
InterProB2PTB6 
PFAMB2PTB6 
ProdomB2PTB6 
UniProtKBA0A073GGT0RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A073GGT0 
PFAMA0A073GGT0 
ProdomA0A073GGT0 
UniProtKBA0A073TCL4RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A073TCL4 
PFAMA0A073TCL4 
ProdomA0A073TCL4 
UniProtKBA0A074ILI2RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A074ILI2 
PFAMA0A074ILI2 
ProdomA0A074ILI2 
UniProtKBA0A079FP96RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A079FP96 
PFAMA0A079FP96 
ProdomA0A079FP96 
UniProtKBA0A080G292RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A080G292 
PFAMA0A080G292 
ProdomA0A080G292 
UniProtKBA0A080J1A8RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A080J1A8 
PFAMA0A080J1A8 
ProdomA0A080J1A8 
UniProtKBA0A0E0V3V0RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A0E0V3V0 
PFAMA0A0E0V3V0 
ProdomA0A0E0V3V0 
UniProtKBA0A0E1SY25RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A0E1SY25 
PFAMA0A0E1SY25 
ProdomA0A0E1SY25 
UniProtKBA0A0F6GMX4RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A0F6GMX4 
PFAMA0A0F6GMX4 
ProdomA0A0F6GMX4 
UniProtKBA0A0H3EGS3RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A0H3EGS3 
PFAMA0A0H3EGS3 
ProdomA0A0H3EGS3 
UniProtKBA0A070Y9P6RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A070Y9P6 
PFAMA0A070Y9P6 
ProdomA0A070Y9P6 
UniProtKBA0A070SMH1RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A070SMH1 
PFAMA0A070SMH1 
ProdomA0A070SMH1 
UniProtKBA0A070FIL1RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A070FIL1 
PFAMA0A070FIL1 
ProdomA0A070FIL1 
UniProtKBB1ITK8RecName: Full=UPF0263 protein YciU;
InterProB1ITK8 
PFAMB1ITK8 
ProdomB1ITK8 
UniProtKBB3HNZ7RecName: Full=UPF0263 protein YciU;
InterProB3HNZ7 
PFAMB3HNZ7 
ProdomB3HNZ7 
UniProtKBB3WG46RecName: Full=UPF0263 protein YciU;
InterProB3WG46 
PFAMB3WG46 
ProdomB3WG46 
UniProtKBB2TZZ3RecName: Full=UPF0263 protein YciU;
InterProB2TZZ3 
PFAMB2TZZ3 
ProdomB2TZZ3 
UniProtKBA0A026S5D4RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A026S5D4 
PFAMA0A026S5D4 
ProdomA0A026S5D4 
UniProtKBA0A028A9X3RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A028A9X3 
PFAMA0A028A9X3 
ProdomA0A028A9X3 
UniProtKBA0A029IWP8RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A029IWP8 
PFAMA0A029IWP8 
ProdomA0A029IWP8 
UniProtKBA0A029M1Z5RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A029M1Z5 
PFAMA0A029M1Z5 
ProdomA0A029M1Z5 
UniProtKBA0A069Z5U0RecName: Full=UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680};
InterProA0A069Z5U0 
PFAMA0A069Z5U0 
ProdomA0A069Z5U0 
UniProtKBA0A0I0KAX1SubName: Full=DsDNA-mimic protein {ECO:0000313|EMBL:CSN81186.1};
InterProA0A0I0KAX1 
PFAMA0A0I0KAX1 
ProdomA0A0I0KAX1