University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A0A027YV54
Original Database ID ref NP_418791.1
Organism Escherichia coli, Shigella boydii, etc.
Annotation subname: full=dump phosphatase
{eco:0000313|embl:ezd90194.1};ec=3.1.3.5
{eco:000 0313|embl:ezd90194.1};
Sequence Length 225

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region1-225
Protein Length225
Template PDB Code2nyvA
Template Region1-211
Sequence Identity25%
E-Value0
GA3411
MPQS1.3225
z-DOPE-0.71
TSVMod MethodMTALL
TSVMod RMSD7.885
TSVMod NO350.599
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2nyvx-ray crystal structure of a phosphoglycolate phosphatase from aquifex aeolicus
DBALI2nyvA 
CATH3.40.50.1000 Domain: 2nyvA01 Rossmann fold (96%)
CATH1.10.150.240 Domain: 2nyvA02 Putative phosphatase; domain 2 (100%)
JenaImageLibrary2nyv 
Target Sequence
SFLD16132192Structure Function Linkage Database entry: Member of the Haloacid dehalogenase superfamily.
UniProtKBC6UQ62SubName: Full=Predicted hydrolase;
InterProC6UQ62 
PFAMC6UQ62 
ProdomC6UQ62 
UniProtKBA0A0G3HMK3SubName: Full=DUMP phosphatase protein {ECO:0000313|EMBL:AKK14005.1};
InterProA0A0G3HMK3 
PFAMA0A0G3HMK3 
ProdomA0A0G3HMK3 
UniProtKBA0A0H3Q3G6SubName: Full=5-nucleotidase YjjG {ECO:0000313|EMBL:EDU93364.1};EC=3.1.3.5 {ECO:0000313|EMBL:EDU93364.1};
InterProA0A0H3Q3G6 
PFAMA0A0H3Q3G6 
ProdomA0A0H3Q3G6 
UniProtKBF1XK97SubName: Full=5'-nucleotidase YjjG;EC=3.1.3.5;
InterProF1XK97 
PFAMF1XK97 
ProdomF1XK97 
UniProtKBE9YLD5SubName: Full=HAD superfamily protein hydrolase {ECO:0000313|EMBL:EGB64804.1};
InterProE9YLD5 
PFAME9YLD5 
ProdomE9YLD5 
UniProtKBG2F551SubName: Full=DUMP phosphatase;EC=3.1.3.5;
InterProG2F551 
PFAMG2F551 
ProdomG2F551 
UniProtKBG2CD95SubName: Full=HAD-superfamily hydrolase, subfamily IA, variant 1 family protein;EC=3.1.3.5;
InterProG2CD95 
PFAMG2CD95 
ProdomG2CD95 
UniProtKBG2B3Y5SubName: Full=HAD-superfamily hydrolase, subfamily IA, variant 1 family protein;EC=3.1.3.5;
InterProG2B3Y5 
PFAMG2B3Y5 
ProdomG2B3Y5 
UniProtKBH4NFV7SubName: Full=Pyrimidine nucleotidase;
InterProH4NFV7 
PFAMH4NFV7 
ProdomH4NFV7 
UniProtKBH4MJ85SubName: Full=Pyrimidine nucleotidase;
InterProH4MJ85 
PFAMH4MJ85 
ProdomH4MJ85 
UniProtKBH4PTQ7SubName: Full=Pyrimidine nucleotidase;
InterProH4PTQ7 
PFAMH4PTQ7 
ProdomH4PTQ7 
UniProtKBA0A0F6CCV7SubName: Full=Nucleotidase {ECO:0000313|EMBL:AFJ32063.1};
InterProA0A0F6CCV7 
PFAMA0A0F6CCV7 
ProdomA0A0F6CCV7 
UniProtKBA0A0E2KWU4SubName: Full=Pyrimidine 5'-nucleotidase YjjG {ECO:0000313|EMBL:EQX21464.1};
InterProA0A0E2KWU4 
PFAMA0A0E2KWU4 
ProdomA0A0E2KWU4 
UniProtKBE8HAR2SubName: Full=DUMP phosphatase;EC=3.1.3.5;
InterProE8HAR2 
PFAME8HAR2 
ProdomE8HAR2 
UniProtKBI5M296SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5M296 
PFAMI5M296 
ProdomI5M296 
UniProtKBD7Y3U7SubName: Full=HAD hydrolase, TIGR02254 family {ECO:0000313|EMBL:EFJ97690.1};
InterProD7Y3U7 
PFAMD7Y3U7 
ProdomD7Y3U7 
UniProtKBI5P3Y5SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5P3Y5 
PFAMI5P3Y5 
ProdomI5P3Y5 
UniProtKBI5QAG2SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5QAG2 
PFAMI5QAG2 
ProdomI5QAG2 
UniProtKBE2JR56SubName: Full=5-nucleotidase YjjG;EC=3.1.3.5;
InterProE2JR56 
PFAME2JR56 
ProdomE2JR56 
UniProtKBE2K617SubName: Full=5-nucleotidase YjjG;EC=3.1.3.5;
InterProE2K617 
PFAME2K617 
ProdomE2K617 
UniProtKBI5RKI5SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5RKI5 
PFAMI5RKI5 
ProdomI5RKI5 
UniProtKBE2WQY1SubName: Full=HAD-superfamily hydrolase, subfamily IA, variant 1 family protein;EC=3.1.3.5;
InterProE2WQY1 
PFAME2WQY1 
ProdomE2WQY1 
UniProtKBI5RJS3SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5RJS3 
PFAMI5RJS3 
ProdomI5RJS3 
UniProtKBI5IWY9SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5IWY9 
PFAMI5IWY9 
ProdomI5IWY9 
UniProtKBH4MIM0SubName: Full=Pyrimidine nucleotidase;
InterProH4MIM0 
PFAMH4MIM0 
ProdomH4MIM0 
UniProtKBF9R6F1SubName: Full=DUMP phosphatase;EC=3.1.3.5;
InterProF9R6F1 
PFAMF9R6F1 
ProdomF9R6F1 
UniProtKBB3B4K5SubName: Full=5-nucleotidase YjjG;EC=3.1.3.5;
InterProB3B4K5 
PFAMB3B4K5 
ProdomB3B4K5 
UniProtKBI5H8M8SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5H8M8 
PFAMI5H8M8 
ProdomI5H8M8 
UniProtKBB3BST1SubName: Full=5-nucleotidase YjjG;EC=3.1.3.5;
InterProB3BST1 
PFAMB3BST1 
ProdomB3BST1 
UniProtKBB3XI80SubName: Full=5-nucleotidase YjjG;EC=3.1.3.5;
InterProB3XI80 
PFAMB3XI80 
ProdomB3XI80 
UniProtKBI5JLZ3SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5JLZ3 
PFAMI5JLZ3 
ProdomI5JLZ3 
UniProtKBI5J3X7SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5J3X7 
PFAMI5J3X7 
ProdomI5J3X7 
UniProtKBC3SE82SubName: Full=5'-nucleotidase (Nucleoside 5'-monophosphate phosphohydrolase) {ECO:0000313|EMBL:CKH61188.1};EC=3.1.3.5 {ECO:0000313|EMBL:CKH61188.1};SubName: Full=5'-nucleotidase YjjG {ECO:0000313|EMBL
InterProC3SE82 
PFAMC3SE82 
ProdomC3SE82 
UniProtKBI5KWD9SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5KWD9 
PFAMI5KWD9 
ProdomI5KWD9 
UniProtKBC4ZT55SubName: Full=DUMP phosphatase;
InterProC4ZT55 
PFAMC4ZT55 
ProdomC4ZT55 
UniProtKBI5MRB7SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5MRB7 
PFAMI5MRB7 
ProdomI5MRB7 
UniProtKBI5H9J2SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5H9J2 
PFAMI5H9J2 
ProdomI5H9J2 
UniProtKBI5HJ69SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5HJ69 
PFAMI5HJ69 
ProdomI5HJ69 
UniProtKBB3AA68SubName: Full=5-nucleotidase YjjG;EC=3.1.3.5;
InterProB3AA68 
PFAMB3AA68 
ProdomB3AA68 
UniProtKBH4S4P7SubName: Full=Pyrimidine nucleotidase;
InterProH4S4P7 
PFAMH4S4P7 
ProdomH4S4P7 
UniProtKBH4WLC9SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProH4WLC9 
PFAMH4WLC9 
ProdomH4WLC9 
UniProtKBH4R8Z0SubName: Full=Pyrimidine nucleotidase;
InterProH4R8Z0 
PFAMH4R8Z0 
ProdomH4R8Z0 
UniProtKBI5D7P7SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5D7P7 
PFAMI5D7P7 
ProdomI5D7P7 
UniProtKBI2A439SubName: Full=Nucleotidase;
InterProI2A439 
PFAMI2A439 
ProdomI2A439 
UniProtKBI5EKD1SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5EKD1 
PFAMI5EKD1 
ProdomI5EKD1 
UniProtKBB1XFI3SubName: Full=Predicted hydrolase;
InterProB1XFI3 
PFAMB1XFI3 
ProdomB1XFI3 
UniProtKBI0ZMR0SubName: Full=HAD-superfamily hydrolase, subfamily IA, variant 1 family protein;
InterProI0ZMR0 
PFAMI0ZMR0 
ProdomI0ZMR0 
UniProtKBI5ESS4SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5ESS4 
PFAMI5ESS4 
ProdomI5ESS4 
UniProtKBB2P9Y6SubName: Full=5-nucleotidase YjjG;EC=3.1.3.5;
InterProB2P9Y6 
PFAMB2P9Y6 
ProdomB2P9Y6 
UniProtKBC6EBJ8SubName: Full=HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:ACT30643.1};
InterProC6EBJ8 
PFAMC6EBJ8 
ProdomC6EBJ8 
UniProtKBI5MI20SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5MI20 
PFAMI5MI20 
ProdomI5MI20 
UniProtKBA0A027YV54SubName: Full=DUMP phosphatase {ECO:0000313|EMBL:EZD90194.1};EC=3.1.3.5 {ECO:0000313|EMBL:EZD90194.1};
InterProA0A027YV54 
PFAMA0A027YV54 
ProdomA0A027YV54 
UniProtKBE2KTS0SubName: Full=5-nucleotidase YjjG;EC=3.1.3.5;
InterProE2KTS0 
PFAME2KTS0 
ProdomE2KTS0 
UniProtKBA0A079D4W8SubName: Full=Pyrimidine 5'-nucleotidase YjjG {ECO:0000313|EMBL:KDY17039.1};EC=3.1.3.5 {ECO:0000313|EMBL:KDY17039.1};
InterProA0A079D4W8 
PFAMA0A079D4W8 
ProdomA0A079D4W8 
UniProtKBA0A0H3XFB0SubName: Full=Hydrolase {ECO:0000313|EMBL:AKM37981.1};
InterProA0A0H3XFB0 
PFAMA0A0H3XFB0 
ProdomA0A0H3XFB0 
UniProtKBH4M262SubName: Full=Pyrimidine nucleotidase;
InterProH4M262 
PFAMH4M262 
ProdomH4M262 
UniProtKBH4QA65SubName: Full=Pyrimidine nucleotidase;
InterProH4QA65 
PFAMH4QA65 
ProdomH4QA65 
UniProtKBH4YQ16SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProH4YQ16 
PFAMH4YQ16 
ProdomH4YQ16 
UniProtKBE8HPH6SubName: Full=DUMP phosphatase;EC=3.1.3.5;
InterProE8HPH6 
PFAME8HPH6 
ProdomE8HPH6 
UniProtKBB2PM98SubName: Full=5-nucleotidase YjjG;EC=3.1.3.5;
InterProB2PM98 
PFAMB2PM98 
ProdomB2PM98 
UniProtKBI5HLL3SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5HLL3 
PFAMI5HLL3 
ProdomI5HLL3 
UniProtKBI5KNE9SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5KNE9 
PFAMI5KNE9 
ProdomI5KNE9 
UniProtKBI5QST0SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5QST0 
PFAMI5QST0 
ProdomI5QST0 
UniProtKBC6ULZ4SubName: Full=Nucleotidase;
InterProC6ULZ4 
PFAMC6ULZ4 
ProdomC6ULZ4 
UniProtKBB6ZSQ2SubName: Full=5-nucleotidase YjjG;EC=3.1.3.5;
InterProB6ZSQ2 
PFAMB6ZSQ2 
ProdomB6ZSQ2 
UniProtKBA0A029L713SubName: Full=Pyrimidine 5'-nucleotidase YjjG {ECO:0000313|EMBL:EZJ80747.1};EC=3.1.3.5 {ECO:0000313|EMBL:EZJ80747.1};
InterProA0A029L713 
PFAMA0A029L713 
ProdomA0A029L713 
UniProtKBB5Z4Q5SubName: Full=5-nucleotidase YjjG;
InterProB5Z4Q5 
PFAMB5Z4Q5 
ProdomB5Z4Q5 
UniProtKBA0A071D3X9SubName: Full=Pyrimidine 5'-nucleotidase YjjG {ECO:0000313|EMBL:KDZ36084.1};EC=3.1.3.5 {ECO:0000313|EMBL:KDZ36084.1};
InterProA0A071D3X9 
PFAMA0A071D3X9 
ProdomA0A071D3X9 
UniProtKBH4RNW2SubName: Full=Pyrimidine nucleotidase;
InterProH4RNW2 
PFAMH4RNW2 
ProdomH4RNW2 
UniProtKBI5J9N2SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5J9N2 
PFAMI5J9N2 
ProdomI5J9N2 
UniProtKBD8AI25SubName: Full=HAD hydrolase, TIGR02254 family {ECO:0000313|EMBL:EFK17201.1};
InterProD8AI25 
PFAMD8AI25 
ProdomD8AI25 
UniProtKBA0A073GHI8SubName: Full=Pyrimidine 5'-nucleotidase YjjG {ECO:0000313|EMBL:KEJ64072.1};EC=3.1.3.5 {ECO:0000313|EMBL:KEJ64072.1};
InterProA0A073GHI8 
PFAMA0A073GHI8 
ProdomA0A073GHI8 
UniProtKBH1E0L5SubName: Full=5'-nucleotidase yjjG;
InterProH1E0L5 
PFAMH1E0L5 
ProdomH1E0L5 
UniProtKBH4XW14SubName: Full=Pyrimidine nucleotidase;
InterProH4XW14 
PFAMH4XW14 
ProdomH4XW14 
UniProtKBI5G6K4SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5G6K4 
PFAMI5G6K4 
ProdomI5G6K4 
UniProtKBI5KP34SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5KP34 
PFAMI5KP34 
ProdomI5KP34 
UniProtKBI5NVS4SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5NVS4 
PFAMI5NVS4 
ProdomI5NVS4 
UniProtKBH4XFN2SubName: Full=Pyrimidine nucleotidase;
InterProH4XFN2 
PFAMH4XFN2 
ProdomH4XFN2 
UniProtKBI5EE32SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5EE32 
PFAMI5EE32 
ProdomI5EE32 
UniProtKBI5ELY7SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5ELY7 
PFAMI5ELY7 
ProdomI5ELY7 
UniProtKBB2NW68SubName: Full=5-nucleotidase YjjG;EC=3.1.3.5;
InterProB2NW68 
PFAMB2NW68 
ProdomB2NW68 
UniProtKBI5FTV9SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5FTV9 
PFAMI5FTV9 
ProdomI5FTV9 
UniProtKBB3AI23SubName: Full=5-nucleotidase YjjG;EC=3.1.3.5;
InterProB3AI23 
PFAMB3AI23 
ProdomB3AI23 
UniProtKBB3BBM6SubName: Full=5-nucleotidase YjjG;EC=3.1.3.5;
InterProB3BBM6 
PFAMB3BBM6 
ProdomB3BBM6 
UniProtKBH4QRP4SubName: Full=Pyrimidine nucleotidase;
InterProH4QRP4 
PFAMH4QRP4 
ProdomH4QRP4 
UniProtKBB7MNC4SubName: Full=DUMP phosphatase {ECO:0000313|EMBL:CAR06137.1};
InterProB7MNC4 
PFAMB7MNC4 
ProdomB7MNC4 
UniProtKBI5KZU4SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5KZU4 
PFAMI5KZU4 
ProdomI5KZU4 
UniProtKBE8I3G4SubName: Full=DUMP phosphatase;EC=3.1.3.5;
InterProE8I3G4 
PFAME8I3G4 
ProdomE8I3G4 
UniProtKBH4NYQ5SubName: Full=Pyrimidine nucleotidase;
InterProH4NYQ5 
PFAMH4NYQ5 
ProdomH4NYQ5 
UniProtKBH4NGN7SubName: Full=Pyrimidine nucleotidase;
InterProH4NGN7 
PFAMH4NGN7 
ProdomH4NGN7 
UniProtKBC9QSU7SubName: Full=HAD-superfamily hydrolase, subfamily IA, variant 1;SubName: Full=Nucleotidase;
InterProC9QSU7 
PFAMC9QSU7 
ProdomC9QSU7 
UniProtKBD8BA25SubName: Full=HAD hydrolase, TIGR02254 family {ECO:0000313|EMBL:EFJ64043.1};
InterProD8BA25 
PFAMD8BA25 
ProdomD8BA25 
UniProtKBI5S383SubName: Full=Pyrimidine 5'-nucleotidase YjjG;EC=3.1.3.5;
InterProI5S383 
PFAMI5S383 
ProdomI5S383 
UniProtKBE7TRL4SubName: Full=5'-nucleotidase YjjG;EC=3.1.3.5;
InterProE7TRL4 
PFAME7TRL4 
ProdomE7TRL4 
UniProtKBA0A080ICF9SubName: Full=Pyrimidine 5'-nucleotidase YjjG {ECO:0000313|EMBL:KEO24463.1};EC=3.1.3.5 {ECO:0000313|EMBL:KEO24463.1};
InterProA0A080ICF9 
PFAMA0A080ICF9 
ProdomA0A080ICF9 
UniProtKBA0A0F6FGH5SubName: Full=5'-nucleotidase YjjG {ECO:0000313|EMBL:AJA29515.1};
InterProA0A0F6FGH5 
PFAMA0A0F6FGH5 
ProdomA0A0F6FGH5 
UniProtKBF1Y126SubName: Full=5'-nucleotidase YjjG;EC=3.1.3.5;
InterProF1Y126 
PFAMF1Y126 
ProdomF1Y126 
UniProtKBG2D889SubName: Full=HAD-superfamily hydrolase, subfamily IA, variant 1 family protein;EC=3.1.3.5;
InterProG2D889 
PFAMG2D889 
ProdomG2D889 
UniProtKBH0QGE4SubName: Full=Predicted hydrolase;
InterProH0QGE4 
PFAMH0QGE4 
ProdomH0QGE4 
UniProtKBC5W668SubName: Full=HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:ACT30643.1};
InterProC5W668 
PFAMC5W668 
ProdomC5W668