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Sequence Information

Primary Database Link A0A017IJV7
Original Database ID ref NP_415401.1
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation subname: full=cold shock domain
protein cspd {eco:0000313|embl:eyd86668.1};
Sequence Length 74

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region1-66
Protein Length74
Template PDB Code2lxjA
Template Region1-65
Sequence Identity54%
E-Value0
GA3411
MPQS1.62259
z-DOPE-1.09
TSVMod MethodMSALL
TSVMod RMSD3.516
TSVMod NO350.832
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2lxj
DBALI2lxjA 
JenaImageLibrary2lxj 
Target Sequence
UniProtKBA0A0G3K584SubName: Full=Cold shock-like protein CspD {ECO:0000313|EMBL:AKK47487.1};
InterProA0A0G3K584 
PFAMA0A0G3K584 
ProdomA0A0G3K584 
UniProtKBA0A027U7C4SubName: Full=Stationary phase/starvation inducible regulatory protein CspD {ECO:0000313|EMBL:EZD33404.1};
InterProA0A027U7C4 
PFAMA0A027U7C4 
ProdomA0A027U7C4 
UniProtKBA0A027YZB5SubName: Full=Stationary phase/starvation inducible regulatory protein CspD {ECO:0000313|EMBL:EZD91679.1};
InterProA0A027YZB5 
PFAMA0A027YZB5 
ProdomA0A027YZB5 
UniProtKBA0A028E471SubName: Full=Stationary phase/starvation inducible regulatory protein CspD {ECO:0000313|EMBL:EZE54713.1};
InterProA0A028E471 
PFAMA0A028E471 
ProdomA0A028E471 
UniProtKBA0A029I740SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:EZJ44618.1};
InterProA0A029I740 
PFAMA0A029I740 
ProdomA0A029I740 
UniProtKBA0A029KYZ4SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:EZJ78523.1};
InterProA0A029KYZ4 
PFAMA0A029KYZ4 
ProdomA0A029KYZ4 
UniProtKBA0A029LSG6SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:EZJ88338.1};
InterProA0A029LSG6 
PFAMA0A029LSG6 
ProdomA0A029LSG6 
UniProtKBA0A064TVZ0SubName: Full=Cold shock-like protein CspD {ECO:0000313|EMBL:KDH00722.1};
InterProA0A064TVZ0 
PFAMA0A064TVZ0 
ProdomA0A064TVZ0 
UniProtKBA0A069X6M0SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KDU24786.1};
InterProA0A069X6M0 
PFAMA0A069X6M0 
ProdomA0A069X6M0 
UniProtKBA0A069Z731SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KDU55292.1};
InterProA0A069Z731 
PFAMA0A069Z731 
ProdomA0A069Z731 
UniProtKBA0A070D336SubName: Full=Stationary phase/starvation inducible regulatory protein CspD {ECO:0000313|EMBL:KDV35568.1};
InterProA0A070D336 
PFAMA0A070D336 
ProdomA0A070D336 
UniProtKBA0A026RTF6SubName: Full=Stationary phase/starvation inducible regulatory protein CspD {ECO:0000313|EMBL:EYZ96061.1};
InterProA0A026RTF6 
PFAMA0A026RTF6 
ProdomA0A026RTF6 
UniProtKBA0A026GY04SubName: Full=Stationary phase/starvation inducible regulatory protein CspD {ECO:0000313|EMBL:EYY74369.1};
InterProA0A026GY04 
PFAMA0A026GY04 
ProdomA0A026GY04 
UniProtKBA7ZJU8SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:ABV18734.1};
InterProA7ZJU8 
PFAMA7ZJU8 
ProdomA7ZJU8 
UniProtKBA0A0H3EF37SubName: Full=Stationary phase/starvation inducible regulatory protein CspD {ECO:0000313|EMBL:ADR26225.1};
InterProA0A0H3EF37 
PFAMA0A0H3EF37 
ProdomA0A0H3EF37 
UniProtKBA0A0H3PJP5SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:EDU89560.1};
InterProA0A0H3PJP5 
PFAMA0A0H3PJP5 
ProdomA0A0H3PJP5 
UniProtKBA0A0H3X263SubName: Full=Inhibitor of DNA replication, cold shock protein {ECO:0000313|EMBL:AKM34444.1};
InterProA0A0H3X263 
PFAMA0A0H3X263 
ProdomA0A0H3X263 
UniProtKBB1LKN0SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:ACB19264.1};
InterProB1LKN0 
PFAMB1LKN0 
ProdomB1LKN0 
UniProtKBB1IWP2SubName: Full=Cold-shock DNA-binding domain protein;
InterProB1IWP2 
PFAMB1IWP2 
ProdomB1IWP2 
UniProtKBB2PDD9SubName: Full=Cold shock domain protein CspD;
InterProB2PDD9 
PFAMB2PDD9 
ProdomB2PDD9 
UniProtKBB2N626SubName: Full=Cold shock domain protein CspD;
InterProB2N626 
PFAMB2N626 
ProdomB2N626 
UniProtKBB2PSH0SubName: Full=Cold shock domain protein CspD;
InterProB2PSH0 
PFAMB2PSH0 
ProdomB2PSH0 
UniProtKBB1X821SubName: Full=Cold shock protein-like protein;
InterProB1X821 
PFAMB1X821 
ProdomB1X821 
UniProtKBA7ZYI4SubName: Full=Cold shock domain protein CspD;
InterProA7ZYI4 
PFAMA7ZYI4 
ProdomA7ZYI4 
UniProtKBA0A070KYC0SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KDW33438.1};
InterProA0A070KYC0 
PFAMA0A070KYC0 
ProdomA0A070KYC0 
UniProtKBA0A070P8I8SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KDW77162.1};
InterProA0A070P8I8 
PFAMA0A070P8I8 
ProdomA0A070P8I8 
UniProtKBA0A080FAS0SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KEN58779.1};
InterProA0A080FAS0 
PFAMA0A080FAS0 
ProdomA0A080FAS0 
UniProtKBA0A080IE30SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KEO27476.1};
InterProA0A080IE30 
PFAMA0A080IE30 
ProdomA0A080IE30 
UniProtKBA0A080JA61SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KEO36428.1};
InterProA0A080JA61 
PFAMA0A080JA61 
ProdomA0A080JA61 
UniProtKBA0A0A5NYK6SubName: Full=Putative Cold shock protein,Cold shock-like protein CspD,stationary phase/starvation inducible regulatory protein CspD,cold shock domain protein CspD,'Cold-shock' DNA-binding domain {ECO
InterProA0A0A5NYK6 
PFAMA0A0A5NYK6 
ProdomA0A0A5NYK6 
UniProtKBA0A0A8U5E9SubName: Full=Cold shock protein homolog {ECO:0000313|EMBL:CEK03966.1};
InterProA0A0A8U5E9 
PFAMA0A0A8U5E9 
ProdomA0A0A8U5E9 
UniProtKBA0A0E2AED7SubName: Full=Stationary phase/starvation inducible regulatory protein CspD {ECO:0000313|EMBL:EIL42048.1};
InterProA0A0E2AED7 
PFAMA0A0E2AED7 
ProdomA0A0E2AED7 
UniProtKBA0A0E2LMA2SubName: Full=Cold shock-like protein CspD {ECO:0000313|EMBL:EQX30734.1};
InterProA0A0E2LMA2 
PFAMA0A0E2LMA2 
ProdomA0A0E2LMA2 
UniProtKBA0A0E2U8L3SubName: Full=Stationary phase/starvation inducible regulatory protein CspD {ECO:0000313|EMBL:EYV12987.1};
InterProA0A0E2U8L3 
PFAMA0A0E2U8L3 
ProdomA0A0E2U8L3 
UniProtKBA0A0E3MXE2SubName: Full=Cold shock-like protein CspD {ECO:0000313|EMBL:AKA89860.1};
InterProA0A0E3MXE2 
PFAMA0A0E3MXE2 
ProdomA0A0E3MXE2 
UniProtKBA0A0F6F3D9SubName: Full=Cold shock protein CspD {ECO:0000313|EMBL:AJA24929.1};
InterProA0A0F6F3D9 
PFAMA0A0F6F3D9 
ProdomA0A0F6F3D9 
UniProtKBA0A080EQ58SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KEN51150.1};
InterProA0A080EQ58 
PFAMA0A080EQ58 
ProdomA0A080EQ58 
UniProtKBA0A079HAI8SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KDY98187.1};
InterProA0A079HAI8 
PFAMA0A079HAI8 
ProdomA0A079HAI8 
UniProtKBA0A079G004SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KDY67853.1};
InterProA0A079G004 
PFAMA0A079G004 
ProdomA0A079G004 
UniProtKBA0A070SNL9SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KDX18374.1};
InterProA0A070SNL9 
PFAMA0A070SNL9 
ProdomA0A070SNL9 
UniProtKBA0A070U247SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KDX36271.1};
InterProA0A070U247 
PFAMA0A070U247 
ProdomA0A070U247 
UniProtKBA0A071CVH9SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KDZ18691.1};
InterProA0A071CVH9 
PFAMA0A071CVH9 
ProdomA0A071CVH9 
UniProtKBA0A071D7D2SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KDZ36958.1};
InterProA0A071D7D2 
PFAMA0A071D7D2 
ProdomA0A071D7D2 
UniProtKBA0A073GI77SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KEJ64369.1};
InterProA0A073GI77 
PFAMA0A073GI77 
ProdomA0A073GI77 
UniProtKBA0A073GVV4SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KEJ69938.1};
InterProA0A073GVV4 
PFAMA0A073GVV4 
ProdomA0A073GVV4 
UniProtKBA0A073UQ74SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KEL70400.1};
InterProA0A073UQ74 
PFAMA0A073UQ74 
ProdomA0A073UQ74 
UniProtKBA0A073VUR8SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KEL83861.1};
InterProA0A073VUR8 
PFAMA0A073VUR8 
ProdomA0A073VUR8 
UniProtKBA0A074I738SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KEO03307.1};
InterProA0A074I738 
PFAMA0A074I738 
ProdomA0A074I738 
UniProtKBA0A074IKZ0SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KEO13784.1};
InterProA0A074IKZ0 
PFAMA0A074IKZ0 
ProdomA0A074IKZ0 
UniProtKBA0A0F6GLQ5SubName: Full=Cold shock-like protein {ECO:0000313|EMBL:BAI54345.1};
InterProA0A0F6GLQ5 
PFAMA0A0F6GLQ5 
ProdomA0A0F6GLQ5 
UniProtKBA0A0G2S8S1SubName: Full=Cold-shock protein {ECO:0000313|EMBL:AJM73010.1};
InterProA0A0G2S8S1 
PFAMA0A0G2S8S1 
ProdomA0A0G2S8S1 
UniProtKBA0A017IJV7SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:EYD86668.1};
InterProA0A017IJV7 
PFAMA0A017IJV7 
ProdomA0A017IJV7 
UniProtKBB2TUJ8SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:ACD08055.1};
InterProB2TUJ8 
PFAMB2TUJ8 
ProdomB2TUJ8 
UniProtKBA0A025C7W1SubName: Full=Stationary phase/starvation inducible regulatory protein CspD {ECO:0000313|EMBL:EYV11744.1};
InterProA0A025C7W1 
PFAMA0A025C7W1 
ProdomA0A025C7W1 
UniProtKBA0A028AK19SubName: Full=Stationary phase/starvation inducible regulatory protein CspD {ECO:0000313|EMBL:EZE11255.1};
InterProA0A028AK19 
PFAMA0A028AK19 
ProdomA0A028AK19 
UniProtKBA0A029PS23SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:EZK24735.1};
InterProA0A029PS23 
PFAMA0A029PS23 
ProdomA0A029PS23 
UniProtKBA0A070DE98SubName: Full=Stationary phase/starvation inducible regulatory protein CspD {ECO:0000313|EMBL:KDV38770.1};
InterProA0A070DE98 
PFAMA0A070DE98 
ProdomA0A070DE98 
UniProtKBA0A071AND0SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KDY64336.1};
InterProA0A071AND0 
PFAMA0A071AND0 
ProdomA0A071AND0 
UniProtKBA0A073HPA7SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KEJ79189.1};
InterProA0A073HPA7 
PFAMA0A073HPA7 
ProdomA0A073HPA7 
UniProtKBA0A079DM89SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KDY23011.1};
InterProA0A079DM89 
PFAMA0A079DM89 
ProdomA0A079DM89 
UniProtKBA0A080G1L5SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KEN72785.1};
InterProA0A080G1L5 
PFAMA0A080G1L5 
ProdomA0A080G1L5 
UniProtKBA0A0E1LVC5SubName: Full=DNA replication inhibitor {ECO:0000313|EMBL:AJF55602.1};
InterProA0A0E1LVC5 
PFAMA0A0E1LVC5 
ProdomA0A0E1LVC5 
UniProtKBA0A0I1MHU8SubName: Full=Putative Cold shock protein {ECO:0000313|EMBL:CSR14852.1};
InterProA0A0I1MHU8 
PFAMA0A0I1MHU8 
ProdomA0A0I1MHU8 
UniProtKBA0A0G2XC14SubName: Full=Stationary phase/starvation inducible regulatory protein CspD {ECO:0000313|EMBL:AKI65959.1};
InterProA0A0G2XC14 
PFAMA0A0G2XC14 
ProdomA0A0G2XC14 
UniProtKBA0A0E0Y355SubName: Full=Stationary phase/starvation inducible regulatory protein CspD {ECO:0000313|EMBL:AFS75262.1};
InterProA0A0E0Y355 
PFAMA0A0E0Y355 
ProdomA0A0E0Y355 
UniProtKBA0A017K513SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:EYE06303.1};
InterProA0A017K513 
PFAMA0A017K513 
ProdomA0A017K513 
UniProtKBA0A0E0TW11SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:AEE55602.1};
InterProA0A0E0TW11 
PFAMA0A0E0TW11 
ProdomA0A0E0TW11 
UniProtKBA0A023YUD1SubName: Full=Cold shock protein CspD {ECO:0000313|EMBL:AHY69478.1};
InterProA0A023YUD1 
PFAMA0A023YUD1 
ProdomA0A023YUD1 
UniProtKBA0A070VCD9SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KDX48003.1};
InterProA0A070VCD9 
PFAMA0A070VCD9 
ProdomA0A070VCD9 
UniProtKBA0A0E0V3D6SubName: Full=Inhibitor of DNA replication, cold shock protein {ECO:0000313|EMBL:AEQ11728.1};
InterProA0A0E0V3D6 
PFAMA0A0E0V3D6 
ProdomA0A0E0V3D6 
UniProtKBA0A0H4RVY2SubName: Full=Stationary phase/starvation inducible regulatory protein CspD {ECO:0000313|EMBL:AKP83606.1};
InterProA0A0H4RVY2 
PFAMA0A0H4RVY2 
ProdomA0A0H4RVY2 
UniProtKBA0A024KQS2SubName: Full=Cold shock protein {ECO:0000313|EMBL:CDP66998.1};
InterProA0A024KQS2 
PFAMA0A024KQS2 
ProdomA0A024KQS2 
UniProtKBA0A029MZP5SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:EZK03154.1};
InterProA0A029MZP5 
PFAMA0A029MZP5 
ProdomA0A029MZP5 
UniProtKBA0A070YSN8SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KDX90033.1};
InterProA0A070YSN8 
PFAMA0A070YSN8 
ProdomA0A070YSN8 
UniProtKBA0A077ZK01SubName: Full=CSD domain containing protein {ECO:0000313|EMBL:CDW60646.1};
InterProA0A077ZK01 
PFAMA0A077ZK01 
ProdomA0A077ZK01 
UniProtKBA0A0F6C181SubName: Full=Stationary phase/starvation inducible regulatory protein CspD {ECO:0000313|EMBL:AFJ27987.1};
InterProA0A0F6C181 
PFAMA0A0F6C181 
ProdomA0A0F6C181 
UniProtKBA0A0G3HWL5SubName: Full=Inhibitor of DNA replication, cold shock protein-like protein {ECO:0000313|EMBL:AKK17125.1};
InterProA0A0G3HWL5 
PFAMA0A0G3HWL5 
ProdomA0A0G3HWL5 
UniProtKBA0A071CC94SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KDY90120.1};
InterProA0A071CC94 
PFAMA0A071CC94 
ProdomA0A071CC94 
UniProtKBA0A073G0V8SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KEJ50552.1};
InterProA0A073G0V8 
PFAMA0A073G0V8 
ProdomA0A073G0V8 
UniProtKBA0A073TFN5SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KEL27472.1};
InterProA0A073TFN5 
PFAMA0A073TFN5 
ProdomA0A073TFN5 
UniProtKBA0A074HWU8SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KEO00504.1};
InterProA0A074HWU8 
PFAMA0A074HWU8 
ProdomA0A074HWU8 
UniProtKBA0A079F9U9SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KDY54797.1};
InterProA0A079F9U9 
PFAMA0A079F9U9 
ProdomA0A079F9U9 
UniProtKBA0A079YNL2SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KEJ61466.1};
InterProA0A079YNL2 
PFAMA0A079YNL2 
ProdomA0A079YNL2 
UniProtKBA0A080GS91SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KEN91643.1};
InterProA0A080GS91 
PFAMA0A080GS91 
ProdomA0A080GS91 
UniProtKBA0A0A0F9L2SubName: Full=Cold shock-like protein CspD {ECO:0000313|EMBL:KGM59544.1};
InterProA0A0A0F9L2 
PFAMA0A0A0F9L2 
ProdomA0A0A0F9L2 
UniProtKBA0A0E1T1E6SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:EDU65720.1};
InterProA0A0E1T1E6 
PFAMA0A0E1T1E6 
ProdomA0A0E1T1E6 
UniProtKBA0A0E2U8E8SubName: Full=Stationary phase/starvation inducible regulatory protein CspD {ECO:0000313|EMBL:EZE27156.1};
InterProA0A0E2U8E8 
PFAMA0A0E2U8E8 
ProdomA0A0E2U8E8 
UniProtKBA0A070PXI6SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KDW84835.1};
InterProA0A070PXI6 
PFAMA0A070PXI6 
ProdomA0A070PXI6 
UniProtKBA0A070F1S0SubName: Full=Stationary phase/starvation inducible regulatory protein CspD {ECO:0000313|EMBL:KDV59690.1};
InterProA0A070F1S0 
PFAMA0A070F1S0 
ProdomA0A070F1S0 
UniProtKBA0A069XX11SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KDU32164.1};
InterProA0A069XX11 
PFAMA0A069XX11 
ProdomA0A069XX11 
UniProtKBA0A0H3MHY0SubName: Full=Cold shock protein homolog {ECO:0000313|EMBL:CAR18398.1};
InterProA0A0H3MHY0 
PFAMA0A0H3MHY0 
ProdomA0A0H3MHY0 
UniProtKBA0A0J3W4F2SubName: Full=Cold shock-like protein CspD {ECO:0000313|EMBL:KME72512.1};
InterProA0A0J3W4F2 
PFAMA0A0J3W4F2 
ProdomA0A0J3W4F2 
UniProtKBB2NZ12SubName: Full=Cold shock domain protein CspD;
InterProB2NZ12 
PFAMB2NZ12 
ProdomB2NZ12 
UniProtKBB1EPZ1SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:EDS90752.1};
InterProB1EPZ1 
PFAMB1EPZ1 
ProdomB1EPZ1 
UniProtKBA0A025FQL4SubName: Full=Stationary phase/starvation inducible regulatory protein CspD {ECO:0000313|EMBL:EYV52720.1};
InterProA0A025FQL4 
PFAMA0A025FQL4 
ProdomA0A025FQL4 
UniProtKBA0A026UIH9SubName: Full=Stationary phase/starvation inducible regulatory protein CspD {ECO:0000313|EMBL:EZA29426.1};
InterProA0A026UIH9 
PFAMA0A026UIH9 
ProdomA0A026UIH9 
UniProtKBA0A028BTR9SubName: Full=Stationary phase/starvation inducible regulatory protein CspD {ECO:0000313|EMBL:EZE26756.1};
InterProA0A028BTR9 
PFAMA0A028BTR9 
ProdomA0A028BTR9 
UniProtKBA0A029IZ41SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:EZJ53716.1};
InterProA0A029IZ41 
PFAMA0A029IZ41 
ProdomA0A029IZ41 
UniProtKBA0A062YF36SubName: Full=Cold shock domain protein CspD {ECO:0000313|EMBL:KDA59011.1};
InterProA0A062YF36 
PFAMA0A062YF36 
ProdomA0A062YF36 
UniProtKBA0A0F6EA73SubName: Full=Stationary phase/starvation inducible regulatory protein CspD {ECO:0000313|EMBL:AIL39744.1};
InterProA0A0F6EA73 
PFAMA0A0F6EA73 
ProdomA0A0F6EA73