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Sequence Information

Primary Database Link P0A976.1
Original Database ID ref NP_416076.1
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation cspf_ecoli recname: full=cold
shock-like protein cspf; short=csp-f
Sequence Length 70

Dataset Information:

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Model Information

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Target Region2-68
Protein Length70
Template PDB Code1mjcA
Template Region2-68
Sequence Identity45%
E-Value0
GA3411
MPQS1.60064
z-DOPE-1.06
TSVMod MethodMTALL
TSVMod RMSD2.319
TSVMod NO350.861
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1mjccrystal structure of cspa, the major cold shock protein of escherichia coli ; PFAM: PF00313 ; SCOP: 25319
DBALI1mjcA 
CATH2.40.50.140 Domain: 1mjcA00 Nucleic acid-binding proteins (97%)
JenaImageLibrary1mjc 
Target Sequence
UniProtKBC8TRU7SubName: Full=Predicted cold shock protein {ECO:0000313|EMBL:BAI25447.1};
InterProC8TRU7 
PFAMC8TRU7 
ProdomC8TRU7 
UniProtKBA0A073TGA1SubName: Full=RNA chaperone, negative regulator of cspA transcription {ECO:0000313|EMBL:KEL26834.1};
InterProA0A073TGA1 
PFAMA0A073TGA1 
ProdomA0A073TGA1 
UniProtKBA0A079EEK9SubName: Full=RNA chaperone, negative regulator of cspA transcription {ECO:0000313|EMBL:KDY42770.1};
InterProA0A079EEK9 
PFAMA0A079EEK9 
ProdomA0A079EEK9 
UniProtKBA0A080F7A1SubName: Full=RNA chaperone, negative regulator of cspA transcription {ECO:0000313|EMBL:KEN57154.1};
InterProA0A080F7A1 
PFAMA0A080F7A1 
ProdomA0A080F7A1 
UniProtKBA0A080I4L9SubName: Full=RNA chaperone, negative regulator of cspA transcription {ECO:0000313|EMBL:KEO24969.1};
InterProA0A080I4L9 
PFAMA0A080I4L9 
ProdomA0A080I4L9 
UniProtKBA0A0E0V502SubName: Full=Qin prophage, cold shock protein {ECO:0000313|EMBL:AEQ12617.1};
InterProA0A0E0V502 
PFAMA0A0E0V502 
ProdomA0A0E0V502 
UniProtKBA0A0E1LXJ1SubName: Full=Cold shock protein {ECO:0000313|EMBL:AJF56407.1};
InterProA0A0E1LXJ1 
PFAMA0A0E1LXJ1 
ProdomA0A0E1LXJ1 
UniProtKBA0A0H3EJY3SubName: Full=Putative cold shock protein {ECO:0000313|EMBL:ADR26988.1};
InterProA0A0H3EJY3 
PFAMA0A0H3EJY3 
ProdomA0A0H3EJY3 
UniProtKBA0A0H3MPX4SubName: Full=Cold shock protein Qin prophage {ECO:0000313|EMBL:CAR17632.1};
InterProA0A0H3MPX4 
PFAMA0A0H3MPX4 
ProdomA0A0H3MPX4 
UniProtKBA0A0J3V6D7SubName: Full=Cold shock-like protein CspF {ECO:0000313|EMBL:KME61061.1};
InterProA0A0J3V6D7 
PFAMA0A0J3V6D7 
ProdomA0A0J3V6D7 
UniProtKBD8A9K6SubName: Full=Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EFK20178.1};
InterProD8A9K6 
PFAMD8A9K6 
ProdomD8A9K6 
UniProtKBA0A071DFV0SubName: Full=RNA chaperone, negative regulator of cspA transcription {ECO:0000313|EMBL:KDZ39998.1};
InterProA0A071DFV0 
PFAMA0A071DFV0 
ProdomA0A071DFV0 
UniProtKBA0A071AAN0SubName: Full=RNA chaperone, negative regulator of cspA transcription {ECO:0000313|EMBL:KDY55097.1};
InterProA0A071AAN0 
PFAMA0A071AAN0 
ProdomA0A071AAN0 
UniProtKBH4WA02SubName: Full=Cold shock protein CspG;
InterProH4WA02 
PFAMH4WA02 
ProdomH4WA02 
UniProtKBI4JA73SubName: Full=Cold shock-like protein CspF {ECO:0000313|EMBL:EIF86132.1};
InterProI4JA73 
PFAMI4JA73 
ProdomI4JA73 
UniProtKBI5PA88SubName: Full=Cold shock-like protein CspF;
InterProI5PA88 
PFAMI5PA88 
ProdomI5PA88 
UniProtKBB3IEC7SubName: Full=Conserved domain protein;
InterProB3IEC7 
PFAMB3IEC7 
ProdomB3IEC7 
UniProtKBB7LNM8SubName: Full=Cold shock protein Qin prophage {ECO:0000313|EMBL:CAQ91848.1};
InterProB7LNM8 
PFAMB7LNM8 
ProdomB7LNM8 
UniProtKBI4UV22SubName: Full=Putative cold shock protein;
InterProI4UV22 
PFAMI4UV22 
ProdomI4UV22 
UniProtKBJ7R1C9SubName: Full=Cold shock protein {ECO:0000313|EMBL:CCK46790.1};
InterProJ7R1C9 
PFAMJ7R1C9 
ProdomJ7R1C9 
UniProtKBB7MNE4SubName: Full=Cold shock protein Qin prophage {ECO:0000313|EMBL:CAR06157.1};
InterProB7MNE4 
PFAMB7MNE4 
ProdomB7MNE4 
UniProtKBK3GR45SubName: Full=Cold shock-like protein CspF;
InterProK3GR45 
PFAMK3GR45 
ProdomK3GR45 
UniProtKBB7NUT0SubName: Full=Cold shock protein Qin prophage;
InterProB7NUT0 
PFAMB7NUT0 
ProdomB7NUT0 
UniProtKBC4ZWX5SubName: Full=Qin prophage; cold shock protein;
InterProC4ZWX5 
PFAMC4ZWX5 
ProdomC4ZWX5 
UniProtKBD7Y7M9SubName: Full=Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EFJ96355.1};
InterProD7Y7M9 
PFAMD7Y7M9 
ProdomD7Y7M9 
UniProtKBD7XLZ2SubName: Full=Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EFJ87628.1};
InterProD7XLZ2 
PFAMD7XLZ2 
ProdomD7XLZ2 
UniProtKBH4VAJ5SubName: Full=RNA chaperone, negative regulator of cspA transcription;
InterProH4VAJ5 
PFAMH4VAJ5 
ProdomH4VAJ5 
UniProtKBG4PYZ1SubName: Full=Qin prophage, cold shock protein;
InterProG4PYZ1 
PFAMG4PYZ1 
ProdomG4PYZ1 
UniProtKBF4M969SubName: Full=Cold shock-like protein CspI;
InterProF4M969 
PFAMF4M969 
ProdomF4M969 
UniProtKBC9QV27SubName: Full=Cold-shock DNA-binding domain protein;SubName: Full=Qin prophage cold shock protein;
InterProC9QV27 
PFAMC9QV27 
ProdomC9QV27 
UniProtKBH4Y105SubName: Full=Cold shock protein CspG;
InterProH4Y105 
PFAMH4Y105 
ProdomH4Y105 
UniProtKBH4X4Y6SubName: Full=Cold shock protein CspG;
InterProH4X4Y6 
PFAMH4X4Y6 
ProdomH4X4Y6 
UniProtKBI2WT57SubName: Full=Cold shock-like protein CspI {ECO:0000313|EMBL:EII33932.1};
InterProI2WT57 
PFAMI2WT57 
ProdomI2WT57 
UniProtKBI2VV23SubName: Full=Cold shock-like protein CspI;
InterProI2VV23 
PFAMI2VV23 
ProdomI2VV23 
UniProtKBI2YIJ8SubName: Full=Cold shock-like protein CspI;
InterProI2YIJ8 
PFAMI2YIJ8 
ProdomI2YIJ8 
UniProtKBI2ZE71SubName: Full=Cold shock-like protein CspI;
InterProI2ZE71 
PFAMI2ZE71 
ProdomI2ZE71 
UniProtKBH1FR25SubName: Full=Cold shock-like protein CspF;
InterProH1FR25 
PFAMH1FR25 
ProdomH1FR25 
UniProtKBH4FIG5SubName: Full=Cold shock-like protein CspF;
InterProH4FIG5 
PFAMH4FIG5 
ProdomH4FIG5 
UniProtKBF4SJ82SubName: Full=Major cold shock protein Cspa1 {ECO:0000313|EMBL:EGI11164.1};
InterProF4SJ82 
PFAMF4SJ82 
ProdomF4SJ82 
UniProtKBE6BR90SubName: Full=Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EFU33228.1};
InterProE6BR90 
PFAME6BR90 
ProdomE6BR90 
UniProtKBE7HAK7SubName: Full=Cold shock-like protein cspI;
InterProE7HAK7 
PFAME7HAK7 
ProdomE7HAK7 
UniProtKBE1JDP8SubName: Full=Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EFK66054.1};
InterProE1JDP8 
PFAME1JDP8 
ProdomE1JDP8 
UniProtKBE8Y8G2SubName: Full=Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ADX50839.1};
InterProE8Y8G2 
PFAME8Y8G2 
ProdomE8Y8G2 
UniProtKBE8IVQ7SubName: Full=Cold shock-like protein CspF;
InterProE8IVQ7 
PFAME8IVQ7 
ProdomE8IVQ7 
UniProtKBE9Y978SubName: Full=Cold-shock DNA-binding domain-containing protein {ECO:0000313|EMBL:EGB68974.1};
InterProE9Y978 
PFAME9Y978 
ProdomE9Y978 
UniProtKBE8I3I2SubName: Full=Cold shock-like protein CspF;
InterProE8I3I2 
PFAME8I3I2 
ProdomE8I3I2 
UniProtKBE1HZ66SubName: Full=Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EFK74605.1};
InterProE1HZ66 
PFAME1HZ66 
ProdomE1HZ66 
UniProtKBG2BNS7SubName: Full=Cold shock-like protein cspI;
InterProG2BNS7 
PFAMG2BNS7 
ProdomG2BNS7 
UniProtKBF4VN13SubName: Full=Major cold shock protein Cspa1 {ECO:0000313|EMBL:EGI43301.1};
InterProF4VN13 
PFAMF4VN13 
ProdomF4VN13 
UniProtKBI2ZRX7SubName: Full=Cold shock-like protein CspI;
InterProI2ZRX7 
PFAMI2ZRX7 
ProdomI2ZRX7 
UniProtKBI2Z2R8SubName: Full=Cold shock-like protein CspI;
InterProI2Z2R8 
PFAMI2Z2R8 
ProdomI2Z2R8 
UniProtKBA0A024KUZ7SubName: Full=Cold shock-like protein CspF {ECO:0000313|EMBL:CDP69026.1};
InterProA0A024KUZ7 
PFAMA0A024KUZ7 
ProdomA0A024KUZ7 
UniProtKBB3XA93SubName: Full=Conserved domain protein;
InterProB3XA93 
PFAMB3XA93 
ProdomB3XA93 
UniProtKBA0A069YMZ8SubName: Full=RNA chaperone, negative regulator of cspA transcription {ECO:0000313|EMBL:KDU48617.1};
InterProA0A069YMZ8 
PFAMA0A069YMZ8 
ProdomA0A069YMZ8 
UniProtKBA0A079FH58SubName: Full=RNA chaperone, negative regulator of cspA transcription {ECO:0000313|EMBL:KDY55823.1};
InterProA0A079FH58 
PFAMA0A079FH58 
ProdomA0A079FH58 
UniProtKBA0A0E2TNW4SubName: Full=Cold-shock protein {ECO:0000313|EMBL:EYV08012.1};
InterProA0A0E2TNW4 
PFAMA0A0E2TNW4 
ProdomA0A0E2TNW4 
UniProtKBE0IX06SubName: Full=Cold shock-like protein CspF {ECO:0000313|EMBL:AFH11345.1};SubName: Full=Qin prophage cold shock protein {ECO:0000313|EMBL:ADT75185.1};
InterProE0IX06 
PFAME0IX06 
ProdomE0IX06 
UniProtKBE8HPU8SubName: Full=Cold shock-like protein CspF;
InterProE8HPU8 
PFAME8HPU8 
ProdomE8HPU8 
UniProtKBE9ZBF1SubName: Full=Cold-shock DNA-binding domain-containing protein;
InterProE9ZBF1 
PFAME9ZBF1 
ProdomE9ZBF1 
UniProtKBG2F9Z1SubName: Full=Cold shock-like protein CspF;
InterProG2F9Z1 
PFAMG2F9Z1 
ProdomG2F9Z1 
UniProtKBH4VW76SubName: Full=RNA chaperone, negative regulator of cspA transcription;
InterProH4VW76 
PFAMH4VW76 
ProdomH4VW76 
UniProtKBH5GS86SubName: Full=Cold shock protein CspG;
InterProH5GS86 
PFAMH5GS86 
ProdomH5GS86 
UniProtKBI4NDT9SubName: Full=Cold shock-like protein CspF;
InterProI4NDT9 
PFAMI4NDT9 
ProdomI4NDT9 
UniProtKBH5G9R2SubName: Full=Cold shock protein CspG;
InterProH5G9R2 
PFAMH5G9R2 
ProdomH5G9R2 
UniProtKBA0A026GT82SubName: Full=Cold-shock protein {ECO:0000313|EMBL:EYY73872.1};
InterProA0A026GT82 
PFAMA0A026GT82 
ProdomA0A026GT82 
UniProtKBH4YFY6SubName: Full=RNA chaperone, negative regulator of cspA transcription;
InterProH4YFY6 
PFAMH4YFY6 
ProdomH4YFY6 
UniProtKBA0A028B1F9SubName: Full=Cold-shock protein {ECO:0000313|EMBL:EZE17013.1};
InterProA0A028B1F9 
PFAMA0A028B1F9 
ProdomA0A028B1F9 
UniProtKBE4P628SubName: Full=Putative cold shock protein;
InterProE4P628 
PFAME4P628 
ProdomE4P628 
UniProtKBH4XK79SubName: Full=Cold shock protein CspG;
InterProH4XK79 
PFAMH4XK79 
ProdomH4XK79 
UniProtKBI4V4Y5SubName: Full=Putative cold shock protein;
InterProI4V4Y5 
PFAMI4V4Y5 
ProdomI4V4Y5 
UniProtKBA0A069XIJ4SubName: Full=RNA chaperone, negative regulator of cspA transcription {ECO:0000313|EMBL:KDU29727.1};
InterProA0A069XIJ4 
PFAMA0A069XIJ4 
ProdomA0A069XIJ4 
UniProtKBA0A0E2A2K7SubName: Full=Cold shock-like protein CspF {ECO:0000313|EMBL:EIL41587.1};
InterProA0A0E2A2K7 
PFAMA0A0E2A2K7 
ProdomA0A0E2A2K7 
UniProtKBE7UR93SubName: Full=Cold shock protein CspF;
InterProE7UR93 
PFAME7UR93 
ProdomE7UR93 
UniProtKBG2CYM9SubName: Full=Cold shock-like protein cspI;
InterProG2CYM9 
PFAMG2CYM9 
ProdomG2CYM9 
UniProtKBI2I8E9SubName: Full=Cold shock-like protein CspF;
InterProI2I8E9 
PFAMI2I8E9 
ProdomI2I8E9 
UniProtKBI4RTP6SubName: Full=Cold shock-like protein CspF;
InterProI4RTP6 
PFAMI4RTP6 
ProdomI4RTP6 
UniProtKBB1XF27SubName: Full=Qin prophage; cold shock protein;
InterProB1XF27 
PFAMB1XF27 
ProdomB1XF27 
UniProtKBE7II68SubName: Full=Cold shock-like protein cspI;
InterProE7II68 
PFAME7II68 
ProdomE7II68 
UniProtKBE9WT25SubName: Full=Cold-shock DNA-binding domain-containing protein;
InterProE9WT25 
PFAME9WT25 
ProdomE9WT25 
UniProtKBE9X3L5SubName: Full=Cold-shock DNA-binding domain-containing protein;
InterProE9X3L5 
PFAME9X3L5 
ProdomE9X3L5 
UniProtKBF9R633SubName: Full=Cold shock-like protein CspF;
InterProF9R633 
PFAMF9R633 
ProdomF9R633 
UniProtKBG2CK24SubName: Full=Cold shock-like protein cspI;
InterProG2CK24 
PFAMG2CK24 
ProdomG2CK24 
UniProtKBH4P6S8SubName: Full=Cold shock protein CspG;
InterProH4P6S8 
PFAMH4P6S8 
ProdomH4P6S8 
UniProtKBH4V0L5SubName: Full=Cold shock protein CspG {ECO:0000313|EMBL:EHV59296.1};
InterProH4V0L5 
PFAMH4V0L5 
ProdomH4V0L5 
UniProtKBE1HT01SubName: Full=Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EFK88962.1};
InterProE1HT01 
PFAME1HT01 
ProdomE1HT01 
UniProtKBH5EYZ5SubName: Full=Cold shock protein CspG;
InterProH5EYZ5 
PFAMH5EYZ5 
ProdomH5EYZ5 
UniProtKBI2Y6V4SubName: Full=Cold shock-like protein CspI;
InterProI2Y6V4 
PFAMI2Y6V4 
ProdomI2Y6V4 
UniProtKBD7XAR5SubName: Full=Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EFJ72662.1};
InterProD7XAR5 
PFAMD7XAR5 
ProdomD7XAR5 
UniProtKBD7YLA2SubName: Full=Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EFK01908.1};
InterProD7YLA2 
PFAMD7YLA2 
ProdomD7YLA2 
UniProtKBA0A0H8MJ23SubName: Full=Cold shock DNA-binding protein {ECO:0000313|EMBL:CSH78254.1};
InterProA0A0H8MJ23 
PFAMA0A0H8MJ23 
ProdomA0A0H8MJ23 
UniProtKBI6G6M3SubName: Full=RNA chaperone, negative regulator of cspA transcription;
InterProI6G6M3 
PFAMI6G6M3 
ProdomI6G6M3 
UniProtKBB7LZU3SubName: Full=Cold shock protein Qin prophage;
InterProB7LZU3 
PFAMB7LZU3 
ProdomB7LZU3 
UniProtKBB7N501SubName: Full=Cold shock protein Qin prophage {ECO:0000313|EMBL:CAR13045.1};
InterProB7N501 
PFAMB7N501 
ProdomB7N501 
UniProtKBI4SHC5SubName: Full=Putative cold shock protein;
InterProI4SHC5 
PFAMI4SHC5 
ProdomI4SHC5 
UniProtKBA0A070RLI2SubName: Full=RNA chaperone, negative regulator of cspA transcription {ECO:0000313|EMBL:KDX05289.1};
InterProA0A070RLI2 
PFAMA0A070RLI2 
ProdomA0A070RLI2 
UniProtKBA0A073GW37SubName: Full=RNA chaperone, negative regulator of cspA transcription {ECO:0000313|EMBL:KEJ69126.1};
InterProA0A073GW37 
PFAMA0A073GW37 
ProdomA0A073GW37 
UniProtKBA0A080ER02SubName: Full=RNA chaperone, negative regulator of cspA transcription {ECO:0000313|EMBL:KEN49141.1};
InterProA0A080ER02 
PFAMA0A080ER02 
ProdomA0A080ER02 
UniProtKBA0A0E0TYH2SubName: Full=Cold shock-like protein CspI {ECO:0000313|EMBL:AEE56601.1};
InterProA0A0E0TYH2 
PFAMA0A0E0TYH2 
ProdomA0A0E0TYH2 
UniProtKBA0A0G3HWJ3SubName: Full=Qin prophage cold shock protein {ECO:0000313|EMBL:AKK17661.1};
InterProA0A0G3HWJ3 
PFAMA0A0G3HWJ3 
ProdomA0A0G3HWJ3 
UniProtKBH4WR47SubName: Full=RNA chaperone, negative regulator of cspA transcription;
InterProH4WR47 
PFAMH4WR47 
ProdomH4WR47