University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P0A987
Original Database ID ref NP_416070.1
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation recname: full=cold shock-like
protein cspi;short=cps-i;
Sequence Length 70

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region4-70
Protein Length70
Template PDB Code3i2zB
Template Region3-69
Sequence Identity73%
E-Value0
GA3411
MPQS1.93814
z-DOPE-1.58
TSVMod MethodMSALL
TSVMod RMSD1.474
TSVMod NO350.943
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3i2zstructure of cold shock protein e from salmonella typhimurium
DBALI3i2zB 
JenaImageLibrary3i2z 
Target Sequence
UniProtKBG4PYA7SubName: Full=Qin prophage, cold shock protein;
InterProG4PYA7 
PFAMG4PYA7 
ProdomG4PYA7 
UniProtKBA0A070SUG6SubName: Full=Cold shock-like protein CspG {ECO:0000313|EMBL:KDX17473.1};
InterProA0A070SUG6 
PFAMA0A070SUG6 
ProdomA0A070SUG6 
UniProtKBA0A071BWB1SubName: Full=Cold shock-like protein CspG {ECO:0000313|EMBL:KDY87295.1};
InterProA0A071BWB1 
PFAMA0A071BWB1 
ProdomA0A071BWB1 
UniProtKBA0A073GTL0SubName: Full=Cold shock-like protein CspG {ECO:0000313|EMBL:KEJ69118.1};
InterProA0A073GTL0 
PFAMA0A073GTL0 
ProdomA0A073GTL0 
UniProtKBA0A073HH63SubName: Full=Cold shock-like protein CspG {ECO:0000313|EMBL:KEJ76694.1};
InterProA0A073HH63 
PFAMA0A073HH63 
ProdomA0A073HH63 
UniProtKBA0A073U9K1SubName: Full=Cold shock-like protein CspG {ECO:0000313|EMBL:KEL63963.1};
InterProA0A073U9K1 
PFAMA0A073U9K1 
ProdomA0A073U9K1 
UniProtKBA0A079D1B0SubName: Full=Cold shock-like protein CspG {ECO:0000313|EMBL:KDY15611.1};
InterProA0A079D1B0 
PFAMA0A079D1B0 
ProdomA0A079D1B0 
UniProtKBA0A080I8T8SubName: Full=Cold shock-like protein CspG {ECO:0000313|EMBL:KEO24962.1};
InterProA0A080I8T8 
PFAMA0A080I8T8 
ProdomA0A080I8T8 
UniProtKBA0A0A0FG23SubName: Full=Cold shock-like protein CspI {ECO:0000313|EMBL:KGM61303.1};
InterProA0A0A0FG23 
PFAMA0A0A0FG23 
ProdomA0A0A0FG23 
UniProtKBA0A0E0TYE3SubName: Full=Cold shock-like protein CspI {ECO:0000313|EMBL:AEE56595.1};
InterProA0A0E0TYE3 
PFAMA0A0E0TYE3 
ProdomA0A0E0TYE3 
UniProtKBA0A0E0V6A9SubName: Full=Qin prophage, cold shock protein {ECO:0000313|EMBL:AEQ12610.1};
InterProA0A0E0V6A9 
PFAMA0A0E0V6A9 
ProdomA0A0E0V6A9 
UniProtKBA0A070DEF9SubName: Full=Cold-shock protein {ECO:0000313|EMBL:KDV36529.1};
InterProA0A070DEF9 
PFAMA0A070DEF9 
ProdomA0A070DEF9 
UniProtKBA0A069YKJ5SubName: Full=Cold shock-like protein CspG {ECO:0000313|EMBL:KDU47819.1};
InterProA0A069YKJ5 
PFAMA0A069YKJ5 
ProdomA0A069YKJ5 
UniProtKBB1IR41SubName: Full=Cold-shock DNA-binding domain protein;
InterProB1IR41 
PFAMB1IR41 
ProdomB1IR41 
UniProtKBG2BNS0SubName: Full=Cold shock-like protein cspI;
InterProG2BNS0 
PFAMG2BNS0 
ProdomG2BNS0 
UniProtKBH4W9Z5SubName: Full=Cold shock protein CspG;
InterProH4W9Z5 
PFAMH4W9Z5 
ProdomH4W9Z5 
UniProtKBH4WR41SubName: Full=Cold shock-like protein CspG;
InterProH4WR41 
PFAMH4WR41 
ProdomH4WR41 
UniProtKBH4X4Y1SubName: Full=Cold shock protein CspG;
InterProH4X4Y1 
PFAMH4X4Y1 
ProdomH4X4Y1 
UniProtKBH4UJ48SubName: Full=Cold shock-like protein CspG {ECO:0000313|EMBL:EHV59598.1};
InterProH4UJ48 
PFAMH4UJ48 
ProdomH4UJ48 
UniProtKBH5CMD8SubName: Full=Cold shock protein CspG;
InterProH5CMD8 
PFAMH5CMD8 
ProdomH5CMD8 
UniProtKBH5B9I2SubName: Full=Cold shock protein CspG;
InterProH5B9I2 
PFAMH5B9I2 
ProdomH5B9I2 
UniProtKBH5D2A7SubName: Full=Cold shock protein CspG;
InterProH5D2A7 
PFAMH5D2A7 
ProdomH5D2A7 
UniProtKBH4YFY0SubName: Full=Cold shock-like protein CspG;
InterProH4YFY0 
PFAMH4YFY0 
ProdomH4YFY0 
UniProtKBE8HPV5SubName: Full=Putative cold shock protein;
InterProE8HPV5 
PFAME8HPV5 
ProdomE8HPV5 
UniProtKBA0A0E2TNV9SubName: Full=Cold-shock protein {ECO:0000313|EMBL:EYV08007.1};
InterProA0A0E2TNV9 
PFAMA0A0E2TNV9 
ProdomA0A0E2TNV9 
UniProtKBA0A0G3HLB7SubName: Full=Qin prophage cold shock protein {ECO:0000313|EMBL:AKK12748.1};
InterProA0A0G3HLB7 
PFAMA0A0G3HLB7 
ProdomA0A0G3HLB7 
UniProtKBE7T283SubName: Full=Cold shock protein CspI {ECO:0000313|EMBL:EFW53930.1};
InterProE7T283 
PFAME7T283 
ProdomE7T283 
UniProtKBE2QMB8SubName: Full=Cold shock-like protein CspG {ECO:0000313|EMBL:CEE08543.1};SubName: Full=Cold shock-like protein CspI {ECO:0000313|EMBL:AJE55976.1};SubName: Full=Cold-shock DNA-binding domain protein {E
InterProE2QMB8 
PFAME2QMB8 
ProdomE2QMB8 
UniProtKBD7XLY4SubName: Full=Cold shock-like protein CspI {ECO:0000313|EMBL:EFJ87620.1};
InterProD7XLY4 
PFAMD7XLY4 
ProdomD7XLY4 
UniProtKBB1XF21SubName: Full=Qin prophage; cold shock protein;
InterProB1XF21 
PFAMB1XF21 
ProdomB1XF21 
UniProtKBE9X3M1SubName: Full=Cold-shock DNA-binding domain-containing protein;
InterProE9X3M1 
PFAME9X3M1 
ProdomE9X3M1 
UniProtKBE8Y8H0SubName: Full=Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ADX50847.1};
InterProE8Y8H0 
PFAME8Y8H0 
ProdomE8Y8H0 
UniProtKBF4V2B1SubName: Full=Conserved domain protein {ECO:0000313|EMBL:EGI40726.1};
InterProF4V2B1 
PFAMF4V2B1 
ProdomF4V2B1 
UniProtKBF4UMW4SubName: Full=Conserved domain protein;
InterProF4UMW4 
PFAMF4UMW4 
ProdomF4UMW4 
UniProtKBF9R6A4SubName: Full=Putative cold shock protein;
InterProF9R6A4 
PFAMF9R6A4 
ProdomF9R6A4 
UniProtKBG2CYN5SubName: Full=Cold shock-like protein cspI;
InterProG2CYN5 
PFAMG2CYN5 
ProdomG2CYN5 
UniProtKBE2WP35SubName: Full=Cold shock-like protein cspI;
InterProE2WP35 
PFAME2WP35 
ProdomE2WP35 
UniProtKBE4P622SubName: Full=Putative cold shock protein;
InterProE4P622 
PFAME4P622 
ProdomE4P622 
UniProtKBD7Y1X9SubName: Full=Cold shock-like protein CspI {ECO:0000313|EMBL:EFJ98327.1};
InterProD7Y1X9 
PFAMD7Y1X9 
ProdomD7Y1X9 
UniProtKBA0A0H3MGB2SubName: Full=Cold shock protein Qin prophage {ECO:0000313|EMBL:CAR17638.1};
InterProA0A0H3MGB2 
PFAMA0A0H3MGB2 
ProdomA0A0H3MGB2 
UniProtKBA0A0J0JT97SubName: Full=Cold-shock protein {ECO:0000313|EMBL:KLQ37506.1};
InterProA0A0J0JT97 
PFAMA0A0J0JT97 
ProdomA0A0J0JT97 
UniProtKBB3XA87SubName: Full=Cold shock DNA-binding protein;
InterProB3XA87 
PFAMB3XA87 
ProdomB3XA87 
UniProtKBC4ZWW9SubName: Full=Qin prophage; cold shock protein;
InterProC4ZWW9 
PFAMC4ZWW9 
ProdomC4ZWW9 
UniProtKBB7NUT6SubName: Full=Cold shock protein Qin prophage;
InterProB7NUT6 
PFAMB7NUT6 
ProdomB7NUT6 
UniProtKBC9QV34SubName: Full=Cold shock DNA-binding protein;SubName: Full=Cold-shock DNA-binding domain protein;
InterProC9QV34 
PFAMC9QV34 
ProdomC9QV34 
UniProtKBB7N4Z5SubName: Full=Cold shock protein Qin prophage {ECO:0000313|EMBL:CAR13039.1};
InterProB7N4Z5 
PFAMB7N4Z5 
ProdomB7N4Z5 
UniProtKBB3IEL4SubName: Full=Cold shock DNA-binding protein;
InterProB3IEL4 
PFAMB3IEL4 
ProdomB3IEL4 
UniProtKBE0IX13SubName: Full=Putative cold shock protein {ECO:0000313|EMBL:AFH11338.1};SubName: Full=Qin prophage cold shock protein {ECO:0000313|EMBL:ADT75178.1};
InterProE0IX13 
PFAME0IX13 
ProdomE0IX13 
UniProtKBD7ZIZ2SubName: Full=Cold shock-like protein CspI {ECO:0000313|EMBL:EFJ79756.1};
InterProD7ZIZ2 
PFAMD7ZIZ2 
ProdomD7ZIZ2 
UniProtKBG2F9Z8SubName: Full=Putative cold shock protein;
InterProG2F9Z8 
PFAMG2F9Z8 
ProdomG2F9Z8 
UniProtKBG2CM84SubName: Full=Cold shock-like protein cspI;
InterProG2CM84 
PFAMG2CM84 
ProdomG2CM84 
UniProtKBA0A024KVT3SubName: Full=Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:CDP69020.1};
InterProA0A024KVT3 
PFAMA0A024KVT3 
ProdomA0A024KVT3 
UniProtKBH5EYY7SubName: Full=Cold shock protein CspG;
InterProH5EYY7 
PFAMH5EYY7 
ProdomH5EYY7 
UniProtKBA0A029MX72SubName: Full=Cold shock-like protein CspG {ECO:0000313|EMBL:EZK02180.1};
InterProA0A029MX72 
PFAMA0A029MX72 
ProdomA0A029MX72 
UniProtKBA0A071CCZ2SubName: Full=Cold shock-like protein CspG {ECO:0000313|EMBL:KDZ16184.1};
InterProA0A071CCZ2 
PFAMA0A071CCZ2 
ProdomA0A071CCZ2 
UniProtKBA0A080ETL2SubName: Full=Cold shock-like protein CspG {ECO:0000313|EMBL:KEN49134.1};
InterProA0A080ETL2 
PFAMA0A080ETL2 
ProdomA0A080ETL2 
UniProtKBA0A0E1LXE6SubName: Full=Cold shock protein {ECO:0000313|EMBL:AJF56400.1};
InterProA0A0E1LXE6 
PFAMA0A0E1LXE6 
ProdomA0A0E1LXE6 
UniProtKBB7MNF0SubName: Full=Cold shock protein Qin prophage {ECO:0000313|EMBL:CAR06163.1};
InterProB7MNF0 
PFAMB7MNF0 
ProdomB7MNF0 
UniProtKBD7XAQ6SubName: Full=Cold shock-like protein CspI {ECO:0000313|EMBL:EFJ72653.1};
InterProD7XAQ6 
PFAMD7XAQ6 
ProdomD7XAQ6 
UniProtKBE1JFW4SubName: Full=Cold shock-like protein CspI {ECO:0000313|EMBL:EFK65261.1};
InterProE1JFW4 
PFAME1JFW4 
ProdomE1JFW4 
UniProtKBE7UR87SubName: Full=Cold shock protein CspI;
InterProE7UR87 
PFAME7UR87 
ProdomE7UR87 
UniProtKBF4SJ76SubName: Full=Conserved domain protein {ECO:0000313|EMBL:EGI11158.1};
InterProF4SJ76 
PFAMF4SJ76 
ProdomF4SJ76 
UniProtKBH4XKH8SubName: Full=Cold shock protein CspG;
InterProH4XKH8 
PFAMH4XKH8 
ProdomH4XKH8 
UniProtKBH1FR18SubName: Full=Cold shock-like protein CspI;
InterProH1FR18 
PFAMH1FR18 
ProdomH1FR18 
UniProtKBF4M963SubName: Full=Cold shock-like protein CspI;
InterProF4M963 
PFAMF4M963 
ProdomF4M963 
UniProtKBA0A026GTT0SubName: Full=Cold-shock protein {ECO:0000313|EMBL:EYY73866.1};
InterProA0A026GTT0 
PFAMA0A026GTT0 
ProdomA0A026GTT0 
UniProtKBE9XZ48SubName: Full=Cold-shock DNA-binding domain-containing protein;
InterProE9XZ48 
PFAME9XZ48 
ProdomE9XZ48 
UniProtKBA0A028B1Q4SubName: Full=Cold-shock protein {ECO:0000313|EMBL:EZE17019.1};
InterProA0A028B1Q4 
PFAMA0A028B1Q4 
ProdomA0A028B1Q4 
UniProtKBA0A0J3V7D8SubName: Full=Cold shock-like protein CspI {ECO:0000313|EMBL:KME61053.1};
InterProA0A0J3V7D8 
PFAMA0A0J3V7D8 
ProdomA0A0J3V7D8 
UniProtKBE9WT19SubName: Full=Cold-shock DNA-binding domain-containing protein;
InterProE9WT19 
PFAME9WT19 
ProdomE9WT19 
UniProtKBH4VW69SubName: Full=Cold shock-like protein CspG;
InterProH4VW69 
PFAMH4VW69 
ProdomH4VW69 
UniProtKBA0A029KWM1SubName: Full=Cold shock-like protein CspG {ECO:0000313|EMBL:EZJ77678.1};
InterProA0A029KWM1 
PFAMA0A029KWM1 
ProdomA0A029KWM1 
UniProtKBA0A079GEC1SubName: Full=Cold shock-like protein CspG {ECO:0000313|EMBL:KDY84131.1};
InterProA0A079GEC1 
PFAMA0A079GEC1 
ProdomA0A079GEC1 
UniProtKBB7LZT7SubName: Full=Cold shock protein Qin prophage;
InterProB7LZT7 
PFAMB7LZT7 
ProdomB7LZT7 
UniProtKBE1HZ60SubName: Full=Cold shock-like protein CspI {ECO:0000313|EMBL:EFK74599.1};
InterProE1HZ60 
PFAME1HZ60 
ProdomE1HZ60 
UniProtKBF4TG82SubName: Full=Conserved domain protein {ECO:0000313|EMBL:EGI21100.1};
InterProF4TG82 
PFAMF4TG82 
ProdomF4TG82 
UniProtKBH4FIF9SubName: Full=Cold shock protein;
InterProH4FIF9 
PFAMH4FIF9 
ProdomH4FIF9 
UniProtKBB7LNN5SubName: Full=Cold shock protein Qin prophage {ECO:0000313|EMBL:CAQ91855.1};
InterProB7LNN5 
PFAMB7LNN5 
ProdomB7LNN5 
UniProtKBC6UHW2SubName: Full=Cold shock protein;
InterProC6UHW2 
PFAMC6UHW2 
ProdomC6UHW2 
UniProtKBC8TRU1SubName: Full=Putative cold shock protein {ECO:0000313|EMBL:BAI25441.1};
InterProC8TRU1 
PFAMC8TRU1 
ProdomC8TRU1 
UniProtKBD8A9J8SubName: Full=Cold shock-like protein CspI {ECO:0000313|EMBL:EFK20170.1};
InterProD8A9J8 
PFAMD8A9J8 
ProdomD8A9J8 
UniProtKBE1HSZ3SubName: Full=Cold shock-like protein CspI {ECO:0000313|EMBL:EFK88954.1};
InterProE1HSZ3 
PFAME1HSZ3 
ProdomE1HSZ3 
UniProtKBE6BR98SubName: Full=Cold shock-like protein CspI {ECO:0000313|EMBL:EFU33236.1};
InterProE6BR98 
PFAME6BR98 
ProdomE6BR98 
UniProtKBE7HAL4SubName: Full=Cold shock-like protein cspI;
InterProE7HAL4 
PFAME7HAL4 
ProdomE7HAL4 
UniProtKBB3HJI8SubName: Full=Cold shock-like protein cspI {ECO:0000313|EMBL:AIF60661.1};
InterProB3HJI8 
PFAMB3HJI8 
ProdomB3HJI8 
UniProtKBE9Y984SubName: Full=Cold-shock DNA-binding domain-containing protein {ECO:0000313|EMBL:EGB68980.1};
InterProE9Y984 
PFAME9Y984 
ProdomE9Y984 
UniProtKBF4VV60SubName: Full=Conserved domain protein {ECO:0000313|EMBL:EGI50469.1};
InterProF4VV60 
PFAMF4VV60 
ProdomF4VV60 
UniProtKBA0A0H3EJ23SubName: Full=Putative cold shock protein {ECO:0000313|EMBL:ADR26982.1};
InterProA0A0H3EJ23 
PFAMA0A0H3EJ23 
ProdomA0A0H3EJ23 
UniProtKBA0A0E2A2J8SubName: Full=Cold-shock protein {ECO:0000313|EMBL:EIL41622.1};
InterProA0A0E2A2J8 
PFAMA0A0E2A2J8 
ProdomA0A0E2A2J8 
UniProtKBA0A0A8UD20SubName: Full=Cold shock protein Qin prophage {ECO:0000313|EMBL:CEK04976.1};
InterProA0A0A8UD20 
PFAMA0A0A8UD20 
ProdomA0A0A8UD20 
UniProtKBE8I3I8SubName: Full=Putative cold shock protein;
InterProE8I3I8 
PFAME8I3I8 
ProdomE8I3I8 
UniProtKBH4Y0Z9SubName: Full=Cold shock protein CspG;
InterProH4Y0Z9 
PFAMH4Y0Z9 
ProdomH4Y0Z9 
UniProtKBH5BQB6SubName: Full=Cold shock protein CspG;
InterProH5BQB6 
PFAMH5BQB6 
ProdomH5BQB6 
UniProtKBH4P6S1SubName: Full=Cold shock protein CspG;
InterProH4P6S1 
PFAMH4P6S1 
ProdomH4P6S1 
UniProtKBA0A069X9F9SubName: Full=Cold shock-like protein CspG {ECO:0000313|EMBL:KDU24053.1};
InterProA0A069X9F9 
PFAMA0A069X9F9 
ProdomA0A069X9F9 
UniProtKBA0A070FIN9SubName: Full=Cold-shock protein {ECO:0000313|EMBL:KDV65363.1};
InterProA0A070FIN9 
PFAMA0A070FIN9 
ProdomA0A070FIN9 
UniProtKBA0A071DTW4SubName: Full=Cold shock-like protein CspG {ECO:0000313|EMBL:KDZ40005.1};
InterProA0A071DTW4 
PFAMA0A071DTW4 
ProdomA0A071DTW4 
UniProtKBA0A073TM18SubName: Full=Cold shock-like protein CspG {ECO:0000313|EMBL:KEL20413.1};
InterProA0A073TM18 
PFAMA0A073TM18 
ProdomA0A073TM18 
UniProtKBA0A080FAW6SubName: Full=Cold shock-like protein CspG {ECO:0000313|EMBL:KEN57147.1};
InterProA0A080FAW6 
PFAMA0A080FAW6 
ProdomA0A080FAW6 
UniProtKBE8IVU9SubName: Full=Putative cold shock protein;
InterProE8IVU9 
PFAME8IVU9 
ProdomE8IVU9