University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A0A017IA27
Original Database ID ref NP_417566.1
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation subname: full=inner membrane protein
yqja {eco:0000313|embl:eyd83557.1};
Sequence Length 220

Dataset Information:

The newest dataset for this sequence was created on 2011-08-28. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region69-107
Protein Length220
Template PDB Code1wyzA
Template Region191-221
Sequence Identity52%
E-Value0.65
GA3410.17
MPQS0.268873
z-DOPE1.89
TSVMod MethodMSALL
TSVMod RMSD9.709
TSVMod NO350.073
Datasete_coli_83333_B1
ModPipe VersionSVN.r1372
Model Date2011-08-28

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1wyzx-ray structure of the putative methyltransferase from bacteroides thetaiotaomicron vpi-5482 at the resolution 2.5 a. norteast structural genomics consortium target btr28
DBALI1wyzA 
JenaImageLibrary1wyz 
Target Sequence
UniProtKBA0A0H3MKR6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CAR19712.1};
InterProA0A0H3MKR6 
PFAMA0A0H3MKR6 
ProdomA0A0H3MKR6 
UniProtKBA0A027U065SubName: Full=Membrane protein {ECO:0000313|EMBL:EZD31001.1};
InterProA0A027U065 
PFAMA0A027U065 
ProdomA0A027U065 
UniProtKBA0A027YRS1SubName: Full=Membrane protein {ECO:0000313|EMBL:EZD89323.1};
InterProA0A027YRS1 
PFAMA0A027YRS1 
ProdomA0A027YRS1 
UniProtKBA0A028ECS7SubName: Full=Membrane protein {ECO:0000313|EMBL:EZE58017.1};
InterProA0A028ECS7 
PFAMA0A028ECS7 
ProdomA0A028ECS7 
UniProtKBA0A029ILK1SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:EZJ49077.1};
InterProA0A029ILK1 
PFAMA0A029ILK1 
ProdomA0A029ILK1 
UniProtKBA0A029LXN8SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:EZJ90470.1};
InterProA0A029LXN8 
PFAMA0A029LXN8 
ProdomA0A029LXN8 
UniProtKBA0A029PEG6SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:EZK20118.1};
InterProA0A029PEG6 
PFAMA0A029PEG6 
ProdomA0A029PEG6 
UniProtKBA0A069XQT0SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KDU32607.1};
InterProA0A069XQT0 
PFAMA0A069XQT0 
ProdomA0A069XQT0 
UniProtKBA0A069Z2W6SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KDU53976.1};
InterProA0A069Z2W6 
PFAMA0A069Z2W6 
ProdomA0A069Z2W6 
UniProtKBA0A070DT37SubName: Full=Membrane protein {ECO:0000313|EMBL:KDV41264.1};
InterProA0A070DT37 
PFAMA0A070DT37 
ProdomA0A070DT37 
UniProtKBA0A070FDK5SubName: Full=Membrane protein {ECO:0000313|EMBL:KDV63528.1};
InterProA0A070FDK5 
PFAMA0A070FDK5 
ProdomA0A070FDK5 
UniProtKBA0A026RTM7SubName: Full=Membrane protein {ECO:0000313|EMBL:EYZ96141.1};
InterProA0A026RTM7 
PFAMA0A026RTM7 
ProdomA0A026RTM7 
UniProtKBA0A026H1Z6SubName: Full=Membrane protein {ECO:0000313|EMBL:EYY76962.1};
InterProA0A026H1Z6 
PFAMA0A026H1Z6 
ProdomA0A026H1Z6 
UniProtKBA1AG12SubName: Full=Putative uncharacterized protein;
InterProA1AG12 
PFAMA1AG12 
ProdomA1AG12 
UniProtKBA0A0H3X837SubName: Full=Inner membrane protein {ECO:0000313|EMBL:AKM36649.1};
InterProA0A0H3X837 
PFAMA0A0H3X837 
ProdomA0A0H3X837 
UniProtKBA0A0J3VQV8SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KME67664.1};
InterProA0A0J3VQV8 
PFAMA0A0J3VQV8 
ProdomA0A0J3VQV8 
UniProtKBB2NBH7SubName: Full=Putative inner membrane protein;
InterProB2NBH7 
PFAMB2NBH7 
ProdomB2NBH7 
UniProtKBB2NMS2SubName: Full=Putative inner membrane protein;
InterProB2NMS2 
PFAMB2NMS2 
ProdomB2NMS2 
UniProtKBB1LFJ9SubName: Full=Putative inner membrane protein {ECO:0000313|EMBL:ACB20002.1};
InterProB1LFJ9 
PFAMB1LFJ9 
ProdomB1LFJ9 
UniProtKBB3B2U7SubName: Full=Putative inner membrane protein;
InterProB3B2U7 
PFAMB3B2U7 
ProdomB3B2U7 
UniProtKBB3A3C1SubName: Full=Putative inner membrane protein;
InterProB3A3C1 
PFAMB3A3C1 
ProdomB3A3C1 
UniProtKBB3BRQ4SubName: Full=Putative inner membrane protein;
InterProB3BRQ4 
PFAMB3BRQ4 
ProdomB3BRQ4 
UniProtKBB2U0C2SubName: Full=Putative inner membrane protein {ECO:0000313|EMBL:ACD06520.1};
InterProB2U0C2 
PFAMB2U0C2 
ProdomB2U0C2 
UniProtKBA8A4Q7SubName: Full=Putative inner membrane protein;
InterProA8A4Q7 
PFAMA8A4Q7 
ProdomA8A4Q7 
UniProtKBA0A070Q4H2SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KDW84428.1};
InterProA0A070Q4H2 
PFAMA0A070Q4H2 
ProdomA0A070Q4H2 
UniProtKBA0A070T7K9SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KDX22048.1};
InterProA0A070T7K9 
PFAMA0A070T7K9 
ProdomA0A070T7K9 
UniProtKBA0A0A8UJR2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CEK06989.1};
InterProA0A0A8UJR2 
PFAMA0A0A8UJR2 
ProdomA0A0A8UJR2 
UniProtKBA0A0E0VB67SubName: Full=Inner membrane protein {ECO:0000313|EMBL:AEQ14350.1};
InterProA0A0E0VB67 
PFAMA0A0E0VB67 
ProdomA0A0E0VB67 
UniProtKBA0A0E0XXG4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFS72621.1};
InterProA0A0E0XXG4 
PFAMA0A0E0XXG4 
ProdomA0A0E0XXG4 
UniProtKBA0A0E1SSS9SubName: Full=Putative inner membrane protein {ECO:0000313|EMBL:EDU61996.1};
InterProA0A0E1SSS9 
PFAMA0A0E1SSS9 
ProdomA0A0E1SSS9 
UniProtKBA0A0E2ADI6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIL41531.1};
InterProA0A0E2ADI6 
PFAMA0A0E2ADI6 
ProdomA0A0E2ADI6 
UniProtKBA0A0F6EHR0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AIL42381.1};
InterProA0A0F6EHR0 
PFAMA0A0F6EHR0 
ProdomA0A0F6EHR0 
UniProtKBA0A0F6FCF9SubName: Full=DedA family inner membrane protein YqjA {ECO:0000313|EMBL:AJA28099.1};
InterProA0A0F6FCF9 
PFAMA0A0F6FCF9 
ProdomA0A0F6FCF9 
UniProtKBA0A0G2SFA6SubName: Full=Membrane protein {ECO:0000313|EMBL:AJM75320.1};
InterProA0A0G2SFA6 
PFAMA0A0G2SFA6 
ProdomA0A0G2SFA6 
UniProtKBA0A0G2XFY3SubName: Full=Membrane protein {ECO:0000313|EMBL:AKI67986.1};
InterProA0A0G2XFY3 
PFAMA0A0G2XFY3 
ProdomA0A0G2XFY3 
UniProtKBA0A0G3JJA0SubName: Full=Membrane protein {ECO:0000313|EMBL:AKK40639.1};
InterProA0A0G3JJA0 
PFAMA0A0G3JJA0 
ProdomA0A0G3JJA0 
UniProtKBA0A0A0FKY3SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KGM62212.1};
InterProA0A0A0FKY3 
PFAMA0A0A0FKY3 
ProdomA0A0A0FKY3 
UniProtKBA0A080II60SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KEO29484.1};
InterProA0A080II60 
PFAMA0A080II60 
ProdomA0A080II60 
UniProtKBA0A080GNY8SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KEN88192.1};
InterProA0A080GNY8 
PFAMA0A080GNY8 
ProdomA0A080GNY8 
UniProtKBA0A070YJT9SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KDX87263.1};
InterProA0A070YJT9 
PFAMA0A070YJT9 
ProdomA0A070YJT9 
UniProtKBA0A071AJE4SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KDY60995.1};
InterProA0A071AJE4 
PFAMA0A071AJE4 
ProdomA0A071AJE4 
UniProtKBA0A073GZ64SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KEJ66348.1};
InterProA0A073GZ64 
PFAMA0A073GZ64 
ProdomA0A073GZ64 
UniProtKBA0A073TGP4SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KEL28087.1};
InterProA0A073TGP4 
PFAMA0A073TGP4 
ProdomA0A073TGP4 
UniProtKBA0A073W557SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KEL87117.1};
InterProA0A073W557 
PFAMA0A073W557 
ProdomA0A073W557 
UniProtKBA0A074HMH7SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KEN95511.1};
InterProA0A074HMH7 
PFAMA0A074HMH7 
ProdomA0A074HMH7 
UniProtKBA0A079DMI0SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KDY24067.1};
InterProA0A079DMI0 
PFAMA0A079DMI0 
ProdomA0A079DMI0 
UniProtKBA0A079F956SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KDY52620.1};
InterProA0A079F956 
PFAMA0A079F956 
ProdomA0A079F956 
UniProtKBA0A079H3F9SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KDY97979.1};
InterProA0A079H3F9 
PFAMA0A079H3F9 
ProdomA0A079H3F9 
UniProtKBA0A079Y4V0SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KEJ55207.1};
InterProA0A079Y4V0 
PFAMA0A079Y4V0 
ProdomA0A079Y4V0 
UniProtKBA0A0G3KDW2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKK49941.1};
InterProA0A0G3KDW2 
PFAMA0A0G3KDW2 
ProdomA0A0G3KDW2 
UniProtKBA0A0G3KQQ6SubName: Full=Membrane protein {ECO:0000313|EMBL:AKK55613.1};
InterProA0A0G3KQQ6 
PFAMA0A0G3KQQ6 
ProdomA0A0G3KQQ6 
UniProtKBA0A017IA27SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:EYD83557.1};
InterProA0A017IA27 
PFAMA0A017IA27 
ProdomA0A017IA27 
UniProtKBB3HD00SubName: Full=Putative inner membrane protein {ECO:0000313|EMBL:AIF63645.1};
InterProB3HD00 
PFAMB3HD00 
ProdomB3HD00 
UniProtKBA0A025CGA7SubName: Full=Membrane protein {ECO:0000313|EMBL:EYV14694.1};
InterProA0A025CGA7 
PFAMA0A025CGA7 
ProdomA0A025CGA7 
UniProtKBA0A028A9Z7SubName: Full=Membrane protein {ECO:0000313|EMBL:EZE08091.1};
InterProA0A028A9Z7 
PFAMA0A028A9Z7 
ProdomA0A028A9Z7 
UniProtKBA0A064T7Z0SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KDG92731.1};
InterProA0A064T7Z0 
PFAMA0A064T7Z0 
ProdomA0A064T7Z0 
UniProtKBA0A070KF92SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KDW29395.1};
InterProA0A070KF92 
PFAMA0A070KF92 
ProdomA0A070KF92 
UniProtKBA0A071DQ74SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KDZ38725.1};
InterProA0A071DQ74 
PFAMA0A071DQ74 
ProdomA0A071DQ74 
UniProtKBA0A074IBW7SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KEN97900.1};
InterProA0A074IBW7 
PFAMA0A074IBW7 
ProdomA0A074IBW7 
UniProtKBA0A080EYP0SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KEN53008.1};
InterProA0A080EYP0 
PFAMA0A080EYP0 
ProdomA0A080EYP0 
UniProtKBA0A0C7MTC0SubName: Full=Putative inner membrane protein {ECO:0000313|EMBL:CEP57782.1};
InterProA0A0C7MTC0 
PFAMA0A0C7MTC0 
ProdomA0A0C7MTC0 
UniProtKBA0A0E3H3Z6SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:AKA92281.1};
InterProA0A0E3H3Z6 
PFAMA0A0E3H3Z6 
ProdomA0A0E3H3Z6 
UniProtKBB2P5T3SubName: Full=Putative inner membrane protein;
InterProB2P5T3 
PFAMB2P5T3 
ProdomB2P5T3 
UniProtKBA0A0H2Z341SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ABJ02602.1};
InterProA0A0H2Z341 
PFAMA0A0H2Z341 
ProdomA0A0H2Z341 
UniProtKBA0A0E2UAB2SubName: Full=Membrane protein {ECO:0000313|EMBL:EYV13858.1};
InterProA0A0E2UAB2 
PFAMA0A0E2UAB2 
ProdomA0A0E2UAB2 
UniProtKBA0A017JNV7SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:EYE00516.1};
InterProA0A017JNV7 
PFAMA0A017JNV7 
ProdomA0A017JNV7 
UniProtKBA0A0E2LGR9SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:EQX26022.1};
InterProA0A0E2LGR9 
PFAMA0A0E2LGR9 
ProdomA0A0E2LGR9 
UniProtKBA0A023Z3D1SubName: Full=DedA family inner membrane protein YqjA {ECO:0000313|EMBL:AHY72535.1};
InterProA0A023Z3D1 
PFAMA0A023Z3D1 
ProdomA0A023Z3D1 
UniProtKBA0A071BXB9SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KDY88429.1};
InterProA0A071BXB9 
PFAMA0A071BXB9 
ProdomA0A071BXB9 
UniProtKBA0A0E2U5S1SubName: Full=Membrane protein {ECO:0000313|EMBL:EZE25283.1};
InterProA0A0E2U5S1 
PFAMA0A0E2U5S1 
ProdomA0A0E2U5S1 
UniProtKBB1XG99SubName: Full=Conserved inner membrane protein;
InterProB1XG99 
PFAMB1XG99 
ProdomB1XG99 
UniProtKBA0A024KN95SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:CDP66202.1};
InterProA0A024KN95 
PFAMA0A024KN95 
ProdomA0A024KN95 
UniProtKBA0A062XVD4SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KDA56547.1};
InterProA0A062XVD4 
PFAMA0A062XVD4 
ProdomA0A062XVD4 
UniProtKBA0A071CIG4SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KDZ18813.1};
InterProA0A071CIG4 
PFAMA0A071CIG4 
ProdomA0A071CIG4 
UniProtKBA0A080EE05SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KEN46234.1};
InterProA0A080EE05 
PFAMA0A080EE05 
ProdomA0A080EE05 
UniProtKBA0A0G3I641SubName: Full=Required, with yghB, for membrane integrity inner membrane protein {ECO:0000313|EMBL:AKK18877.1};
InterProA0A0G3I641 
PFAMA0A0G3I641 
ProdomA0A0G3I641 
UniProtKBA0A0H3ENY6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ADR28491.1};
InterProA0A0H3ENY6 
PFAMA0A0H3ENY6 
ProdomA0A0H3ENY6 
UniProtKBA0A073FSC9SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KEJ44726.1};
InterProA0A073FSC9 
PFAMA0A073FSC9 
ProdomA0A073FSC9 
UniProtKBA0A073UQ04SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KEL69537.1};
InterProA0A073UQ04 
PFAMA0A073UQ04 
ProdomA0A073UQ04 
UniProtKBA0A074IDV8SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KEO07728.1};
InterProA0A074IDV8 
PFAMA0A074IDV8 
ProdomA0A074IDV8 
UniProtKBA0A079FEA3SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KDY57246.1};
InterProA0A079FEA3 
PFAMA0A079FEA3 
ProdomA0A079FEA3 
UniProtKBA0A080FRI1SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KEN65293.1};
InterProA0A080FRI1 
PFAMA0A080FRI1 
ProdomA0A080FRI1 
UniProtKBA0A094R3I8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CDX08528.1};
InterProA0A094R3I8 
PFAMA0A094R3I8 
ProdomA0A094R3I8 
UniProtKBA0A0E0U461SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEE58387.1};
InterProA0A0E0U461 
PFAMA0A0E0U461 
ProdomA0A0E0U461 
UniProtKBA0A0E1M1J8SubName: Full=General envelope maintenance protein {ECO:0000313|EMBL:AJF57916.1};
InterProA0A0E1M1J8 
PFAMA0A0E1M1J8 
ProdomA0A0E1M1J8 
UniProtKBA0A0F6C968SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFJ30774.1};
InterProA0A0F6C968 
PFAMA0A0F6C968 
ProdomA0A0F6C968 
UniProtKBA0A0F6MHB7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EID63438.1};
InterProA0A0F6MHB7 
PFAMA0A0F6MHB7 
ProdomA0A0F6MHB7 
UniProtKBA0A070UXE5SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KDX46966.1};
InterProA0A070UXE5 
PFAMA0A070UXE5 
ProdomA0A070UXE5 
UniProtKBA0A070P2E0SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KDW75371.1};
InterProA0A070P2E0 
PFAMA0A070P2E0 
ProdomA0A070P2E0 
UniProtKBA0A070DEX8SubName: Full=Membrane protein {ECO:0000313|EMBL:KDV36724.1};
InterProA0A070DEX8 
PFAMA0A070DEX8 
ProdomA0A070DEX8 
UniProtKBA0A0H4S2T7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKP86076.1};
InterProA0A0H4S2T7 
PFAMA0A0H4S2T7 
ProdomA0A0H4S2T7 
UniProtKBB2PL77SubName: Full=Putative inner membrane protein;
InterProB2PL77 
PFAMB2PL77 
ProdomB2PL77 
UniProtKBB3AQ82SubName: Full=Putative inner membrane protein;
InterProB3AQ82 
PFAMB3AQ82 
ProdomB3AQ82 
UniProtKBB1IRL8SubName: Full=SNARE associated Golgi protein;
InterProB1IRL8 
PFAMB1IRL8 
ProdomB1IRL8 
UniProtKBA0A025GIK0SubName: Full=Membrane protein {ECO:0000313|EMBL:EYV64083.1};
InterProA0A025GIK0 
PFAMA0A025GIK0 
ProdomA0A025GIK0 
UniProtKBA0A026VB31SubName: Full=Membrane protein {ECO:0000313|EMBL:EZA39061.1};
InterProA0A026VB31 
PFAMA0A026VB31 
ProdomA0A026VB31 
UniProtKBA0A028C794SubName: Full=Membrane protein {ECO:0000313|EMBL:EZE31428.1};
InterProA0A028C794 
PFAMA0A028C794 
ProdomA0A028C794 
UniProtKBA0A029KCP3SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:EZJ70646.1};
InterProA0A029KCP3 
PFAMA0A029KCP3 
ProdomA0A029KCP3 
UniProtKBA0A069XDS7SubName: Full=Inner membrane protein YqjA {ECO:0000313|EMBL:KDU27266.1};
InterProA0A069XDS7 
PFAMA0A069XDS7 
ProdomA0A069XDS7 
UniProtKBA0A0G3J4D6SubName: Full=Membrane protein {ECO:0000313|EMBL:AKK34717.1};
InterProA0A0G3J4D6 
PFAMA0A0G3J4D6 
ProdomA0A0G3J4D6