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Sequence Information

Primary Database Link A0A023YSR7
Original Database ID ref NP_414989.1
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation subname: full=rna signal recognition
particle 4.5s rna {eco:0000313|embl:ahy6890
8.1};
Sequence Length 117

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region1-117
Protein Length117
Template PDB Code2okqA
Template Region1-117
Sequence Identity100%
E-Value0
GA3411
MPQS2.183
z-DOPE-0.91
TSVMod MethodMSALL
TSVMod RMSD0.427
TSVMod NO351
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Sequence Model Coverage Summary
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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2okqcrystal structure of unknown conserved ybaa protein from shigella flexneri
DBALI2okqA 
CATH3.30.70.900 Domain: 2okqA00 Alpha-Beta Plaits (92%)
JenaImageLibrary2okq 
Target Sequence
UniProtKBB2N9I3SubName: Full=Putative uncharacterized protein;
InterProB2N9I3 
PFAMB2N9I3 
ProdomB2N9I3 
UniProtKBA0A028BYT5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZE28516.1};
InterProA0A028BYT5 
PFAMA0A028BYT5 
ProdomA0A028BYT5 
UniProtKBA0A029IB94SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZJ45825.1};
InterProA0A029IB94 
PFAMA0A029IB94 
ProdomA0A029IB94 
UniProtKBA0A029LXN4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZJ89722.1};
InterProA0A029LXN4 
PFAMA0A029LXN4 
ProdomA0A029LXN4 
UniProtKBA0A029N1L9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZK03730.1};
InterProA0A029N1L9 
PFAMA0A029N1L9 
ProdomA0A029N1L9 
UniProtKBA0A062Y8W7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDA59498.1};
InterProA0A062Y8W7 
PFAMA0A062Y8W7 
ProdomA0A062Y8W7 
UniProtKBA0A069X7D2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU25902.1};
InterProA0A069X7D2 
PFAMA0A069X7D2 
ProdomA0A069X7D2 
UniProtKBA0A070F903SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDV61572.1};
InterProA0A070F903 
PFAMA0A070F903 
ProdomA0A070F903 
UniProtKBA0A070L117SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDW34433.1};
InterProA0A070L117 
PFAMA0A070L117 
ProdomA0A070L117 
UniProtKBA0A070U5F7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX37000.1};
InterProA0A070U5F7 
PFAMA0A070U5F7 
ProdomA0A070U5F7 
UniProtKBA0A070UWE4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX45859.1};
InterProA0A070UWE4 
PFAMA0A070UWE4 
ProdomA0A070UWE4 
UniProtKBA0A027YS95SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZD89518.1};
InterProA0A027YS95 
PFAMA0A027YS95 
ProdomA0A027YS95 
UniProtKBA0A027TUR2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZD28767.1};
InterProA0A027TUR2 
PFAMA0A027TUR2 
ProdomA0A027TUR2 
UniProtKBA1A8C4SubName: Full=Putative uncharacterized protein;
InterProA1A8C4 
PFAMA1A8C4 
ProdomA1A8C4 
UniProtKBB1XFP3SubName: Full=Conserved protein;
InterProB1XFP3 
PFAMB1XFP3 
ProdomB1XFP3 
UniProtKBB3A4I6SubName: Full=Putative uncharacterized protein;
InterProB3A4I6 
PFAMB3A4I6 
ProdomB3A4I6 
UniProtKBB3AMH6SubName: Full=Putative uncharacterized protein;
InterProB3AMH6 
PFAMB3AMH6 
ProdomB3AMH6 
UniProtKBB3AYN5SubName: Full=Putative uncharacterized protein;
InterProB3AYN5 
PFAMB3AYN5 
ProdomB3AYN5 
UniProtKBB2PFG8SubName: Full=Putative uncharacterized protein;
InterProB2PFG8 
PFAMB2PFG8 
ProdomB2PFG8 
UniProtKBB6I0A6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAG76005.1};
InterProB6I0A6 
PFAMB6I0A6 
ProdomB6I0A6 
UniProtKBB3XD22SubName: Full=Putative uncharacterized protein;
InterProB3XD22 
PFAMB3XD22 
ProdomB3XD22 
UniProtKBB6ZPN7SubName: Full=Uncharacterized protein;
InterProB6ZPN7 
PFAMB6ZPN7 
ProdomB6ZPN7 
UniProtKBB3IFW9SubName: Full=Putative uncharacterized protein;
InterProB3IFW9 
PFAMB3IFW9 
ProdomB3IFW9 
UniProtKBB1IZD8SubName: Full=Putative uncharacterized protein;
InterProB1IZD8 
PFAMB1IZD8 
ProdomB1IZD8 
UniProtKBA0A071C3B3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY92785.1};
InterProA0A071C3B3 
PFAMA0A071C3B3 
ProdomA0A071C3B3 
UniProtKBA0A071CHB6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDZ18258.1};
InterProA0A071CHB6 
PFAMA0A071CHB6 
ProdomA0A071CHB6 
UniProtKBA0A0E0TUE5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEE55156.1};
InterProA0A0E0TUE5 
PFAMA0A0E0TUE5 
ProdomA0A0E0TUE5 
UniProtKBA0A0E1LU67SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AJF55220.1};
InterProA0A0E1LU67 
PFAMA0A0E1LU67 
ProdomA0A0E1LU67 
UniProtKBA0A0E1T5I2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EDU66446.1};
InterProA0A0E1T5I2 
PFAMA0A0E1T5I2 
ProdomA0A0E1T5I2 
UniProtKBA0A0E2L8X4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EQX32854.1};
InterProA0A0E2L8X4 
PFAMA0A0E2L8X4 
ProdomA0A0E2L8X4 
UniProtKBA0A0E2TIE6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EYV06747.1};
InterProA0A0E2TIE6 
PFAMA0A0E2TIE6 
ProdomA0A0E2TIE6 
UniProtKBA0A0G2S7T2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AJM72635.1};
InterProA0A0G2S7T2 
PFAMA0A0G2S7T2 
ProdomA0A0G2S7T2 
UniProtKBA0A0G2X5S2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKI65515.1};
InterProA0A0G2X5S2 
PFAMA0A0G2X5S2 
ProdomA0A0G2X5S2 
UniProtKBA0A0G3J9F9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKK37848.1};
InterProA0A0G3J9F9 
PFAMA0A0G3J9F9 
ProdomA0A0G3J9F9 
UniProtKBA0A0G3KGG6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKK52995.1};
InterProA0A0G3KGG6 
PFAMA0A0G3KGG6 
ProdomA0A0G3KGG6 
UniProtKBA0A0H3ME85SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CAR16358.1};
InterProA0A0H3ME85 
PFAMA0A0H3ME85 
ProdomA0A0H3ME85 
UniProtKBA0A0C7MA89SubName: Full=Conserved Ybaa Protein {ECO:0000313|EMBL:CEP56548.1};
InterProA0A0C7MA89 
PFAMA0A0C7MA89 
ProdomA0A0C7MA89 
UniProtKBA0A0A0FEX1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KGM60012.1};
InterProA0A0A0FEX1 
PFAMA0A0A0FEX1 
ProdomA0A0A0FEX1 
UniProtKBA0A094NIA5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CDX05693.1};
InterProA0A094NIA5 
PFAMA0A094NIA5 
ProdomA0A094NIA5 
UniProtKBA0A073GCY9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEJ51740.1};
InterProA0A073GCY9 
PFAMA0A073GCY9 
ProdomA0A073GCY9 
UniProtKBA0A073GKP4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEJ65442.1};
InterProA0A073GKP4 
PFAMA0A073GKP4 
ProdomA0A073GKP4 
UniProtKBA0A073VZQ5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEL85970.1};
InterProA0A073VZQ5 
PFAMA0A073VZQ5 
ProdomA0A073VZQ5 
UniProtKBA0A074I4Y4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO01933.1};
InterProA0A074I4Y4 
PFAMA0A074I4Y4 
ProdomA0A074I4Y4 
UniProtKBA0A074IPI8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO16081.1};
InterProA0A074IPI8 
PFAMA0A074IPI8 
ProdomA0A074IPI8 
UniProtKBA0A079DL22SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY22749.1};
InterProA0A079DL22 
PFAMA0A079DL22 
ProdomA0A079DL22 
UniProtKBA0A079H2H0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY97611.1};
InterProA0A079H2H0 
PFAMA0A079H2H0 
ProdomA0A079H2H0 
UniProtKBA0A080EWL8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN52338.1};
InterProA0A080EWL8 
PFAMA0A080EWL8 
ProdomA0A080EWL8 
UniProtKBA0A080G8V1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN74386.1};
InterProA0A080G8V1 
PFAMA0A080G8V1 
ProdomA0A080G8V1 
UniProtKBA0A080GYC3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN92442.1};
InterProA0A080GYC3 
PFAMA0A080GYC3 
ProdomA0A080GYC3 
UniProtKBA0A0H3PS67SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EDU91935.1};
InterProA0A0H3PS67 
PFAMA0A0H3PS67 
ProdomA0A0H3PS67 
UniProtKBA0A0I0YEY7SubName: Full=Conserved Ybaa Protein {ECO:0000313|EMBL:CSP42261.1};
InterProA0A0I0YEY7 
PFAMA0A0I0YEY7 
ProdomA0A0I0YEY7 
UniProtKBA0A023YSR7SubName: Full=RNA signal recognition particle 4.5S RNA {ECO:0000313|EMBL:AHY68908.1};
InterProA0A023YSR7 
PFAMA0A023YSR7 
ProdomA0A023YSR7 
UniProtKBB7L693SubName: Full=YbaA protein {ECO:0000313|EMBL:CAU96342.1};
InterProB7L693 
PFAMB7L693 
ProdomB7L693 
UniProtKBA0A026RW55SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EYZ97295.1};
InterProA0A026RW55 
PFAMA0A026RW55 
ProdomA0A026RW55 
UniProtKBA0A029J097SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZJ54478.1};
InterProA0A029J097 
PFAMA0A029J097 
ProdomA0A029J097 
UniProtKBA0A069Z3F1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU53435.1};
InterProA0A069Z3F1 
PFAMA0A069Z3F1 
ProdomA0A069Z3F1 
UniProtKBA0A070YDT8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX89286.1};
InterProA0A070YDT8 
PFAMA0A070YDT8 
ProdomA0A070YDT8 
UniProtKBA0A073TD15SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEL25742.1};
InterProA0A073TD15 
PFAMA0A073TD15 
ProdomA0A073TD15 
UniProtKBA0A079F6S6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY53556.1};
InterProA0A079F6S6 
PFAMA0A079F6S6 
ProdomA0A079F6S6 
UniProtKBA0A080JG01SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO38448.1};
InterProA0A080JG01 
PFAMA0A080JG01 
ProdomA0A080JG01 
UniProtKBA0A0E0V1F7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEQ11271.1};
InterProA0A0E0V1F7 
PFAMA0A0E0V1F7 
ProdomA0A0E0V1F7 
UniProtKBA0A0F6F206SubName: Full=RNA signal recognition particle 4.5S RNA {ECO:0000313|EMBL:AJA24446.1};
InterProA0A0F6F206 
PFAMA0A0F6F206 
ProdomA0A0F6F206 
UniProtKBB3BF33SubName: Full=Putative uncharacterized protein;
InterProB3BF33 
PFAMB3BF33 
ProdomB3BF33 
UniProtKBA0A0J3W949SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KME74277.1};
InterProA0A0J3W949 
PFAMA0A0J3W949 
ProdomA0A0J3W949 
UniProtKBA0A0F6E8T8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AIL39259.1};
InterProA0A0F6E8T8 
PFAMA0A0F6E8T8 
ProdomA0A0F6E8T8 
UniProtKBA0A024KRR4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CDP67886.1};
InterProA0A024KRR4 
PFAMA0A024KRR4 
ProdomA0A024KRR4 
UniProtKBA0A0E3KEA7SubName: Full=Uncharacterized protein YbaA {ECO:0000313|EMBL:AKA89443.1};
InterProA0A0E3KEA7 
PFAMA0A0E3KEA7 
ProdomA0A0E3KEA7 
UniProtKBA0A025CAL4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EYV12423.1};
InterProA0A025CAL4 
PFAMA0A025CAL4 
ProdomA0A025CAL4 
UniProtKBA0A073GZC9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEJ71123.1};
InterProA0A073GZC9 
PFAMA0A073GZC9 
ProdomA0A073GZC9 
UniProtKBA0A0F6BZY7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFJ27543.1};
InterProA0A0F6BZY7 
PFAMA0A0F6BZY7 
ProdomA0A0F6BZY7 
UniProtKBB2U4R0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ACD07757.1};
InterProB2U4R0 
PFAMB2U4R0 
ProdomB2U4R0 
UniProtKBA0A026HE76SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EYY80398.1};
InterProA0A026HE76 
PFAMA0A026HE76 
ProdomA0A026HE76 
UniProtKBA0A069XN31SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU31358.1};
InterProA0A069XN31 
PFAMA0A069XN31 
ProdomA0A069XN31 
UniProtKBA0A073HSI5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEJ80240.1};
InterProA0A073HSI5 
PFAMA0A073HSI5 
ProdomA0A073HSI5 
UniProtKBA0A080IGX8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO28521.1};
InterProA0A080IGX8 
PFAMA0A080IGX8 
ProdomA0A080IGX8 
UniProtKBA0A0H2YWH8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ABI99913.1};
InterProA0A0H2YWH8 
PFAMA0A0H2YWH8 
ProdomA0A0H2YWH8 
UniProtKBB2NXE7SubName: Full=Putative uncharacterized protein;
InterProB2NXE7 
PFAMB2NXE7 
ProdomB2NXE7 
UniProtKBA0A073UTT6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEL71151.1};
InterProA0A073UTT6 
PFAMA0A073UTT6 
ProdomA0A073UTT6 
UniProtKBA0A074I6J8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO03919.1};
InterProA0A074I6J8 
PFAMA0A074I6J8 
ProdomA0A074I6J8 
UniProtKBA0A079FT22SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY63857.1};
InterProA0A079FT22 
PFAMA0A079FT22 
ProdomA0A079FT22 
UniProtKBA0A080FD50SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN59797.1};
InterProA0A080FD50 
PFAMA0A080FD50 
ProdomA0A080FD50 
UniProtKBA0A090NE12SubName: Full=4.5S RNA signal recogintion particle {ECO:0000313|EMBL:ESU77919.1};
InterProA0A090NE12 
PFAMA0A090NE12 
ProdomA0A090NE12 
UniProtKBA0A0A8UNZ6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CEK08455.1};
InterProA0A0A8UNZ6 
PFAMA0A0A8UNZ6 
ProdomA0A0A8UNZ6 
UniProtKBA0A0E0Y2R7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFS75713.1};
InterProA0A0E0Y2R7 
PFAMA0A0E0Y2R7 
ProdomA0A0E0Y2R7 
UniProtKBA0A0E2A1F5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIL40411.1};
InterProA0A0E2A1F5 
PFAMA0A0E2A1F5 
ProdomA0A0E2A1F5 
UniProtKBA0A0F6MA31SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EID61022.1};
InterProA0A0F6MA31 
PFAMA0A0F6MA31 
ProdomA0A0F6MA31 
UniProtKBA0A0G3J6X7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKK36409.1};
InterProA0A0G3J6X7 
PFAMA0A0G3J6X7 
ProdomA0A0G3J6X7 
UniProtKBA0A071DJ31SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDZ40276.1};
InterProA0A071DJ31 
PFAMA0A071DJ31 
ProdomA0A071DJ31 
UniProtKBA0A071AEW1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY57370.1};
InterProA0A071AEW1 
PFAMA0A071AEW1 
ProdomA0A071AEW1 
UniProtKBA0A070SUE8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX21316.1};
InterProA0A070SUE8 
PFAMA0A070SUE8 
ProdomA0A070SUE8 
UniProtKBB1LJL3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ACB17934.1};
InterProB1LJL3 
PFAMB1LJL3 
ProdomB1LJL3 
UniProtKBB3BT34SubName: Full=Putative uncharacterized protein;
InterProB3BT34 
PFAMB3BT34 
ProdomB3BT34 
UniProtKBB5Z3W6SubName: Full=Uncharacterized protein;
InterProB5Z3W6 
PFAMB5Z3W6 
ProdomB5Z3W6 
UniProtKBB2P294SubName: Full=Putative uncharacterized protein;
InterProB2P294 
PFAMB2P294 
ProdomB2P294 
UniProtKBA0A026UGS0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZA28821.1};
InterProA0A026UGS0 
PFAMA0A026UGS0 
ProdomA0A026UGS0 
UniProtKBA0A028AIH6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZE10609.1};
InterProA0A028AIH6 
PFAMA0A028AIH6 
ProdomA0A028AIH6 
UniProtKBA0A029L2R4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZJ79237.1};
InterProA0A029L2R4 
PFAMA0A029L2R4 
ProdomA0A029L2R4 
UniProtKBA0A029PUY0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZK26269.1};
InterProA0A029PUY0 
PFAMA0A029PUY0 
ProdomA0A029PUY0 
UniProtKBA0A070D6B4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDV36022.1};
InterProA0A070D6B4 
PFAMA0A070D6B4 
ProdomA0A070D6B4 
UniProtKBA0A0H3EE27SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ADR25860.1};
InterProA0A0H3EE27 
PFAMA0A0H3EE27 
ProdomA0A0H3EE27