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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A0A017IN08
Original Database ID ref NP_415061.2
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation subname: full=uncharacterized
protein {eco:0000313|embl:eyd87419.1};
Sequence Length 70

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region1-70
Protein Length70
Template PDB Code1p9kA
Template Region10-79
Sequence Identity100%
E-Value0
GA3411
MPQS2.0934
z-DOPE-0.03
TSVMod MethodMSALL
TSVMod RMSD1.721
TSVMod NO351
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Sequence Model Coverage Summary
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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1p9kthe solution structure of ybcj from e. coli reveals a recently discovered alfal motif involved in rna-binding
DBALI1p9kA 
CATH3.10.290.10 Domain: 1p9kA00 Structural Genomics Hypothetical 15.5 Kd Protein In Mrca-pcka Intergenic Region; Chain (89%)
JenaImageLibrary1p9k 
Target Sequence
UniProtKBB3BTB1SubName: Full=Putative uncharacterized protein;
InterProB3BTB1 
PFAMB3BTB1 
ProdomB3BTB1 
UniProtKBA0A027ZQ49SubName: Full=Ribosome-associated protein {ECO:0000313|EMBL:EZE00673.1};
InterProA0A027ZQ49 
PFAMA0A027ZQ49 
ProdomA0A027ZQ49 
UniProtKBA0A028BUN6SubName: Full=Ribosome-associated protein {ECO:0000313|EMBL:EZE26993.1};
InterProA0A028BUN6 
PFAMA0A028BUN6 
ProdomA0A028BUN6 
UniProtKBA0A029J178SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZJ54545.1};
InterProA0A029J178 
PFAMA0A029J178 
ProdomA0A029J178 
UniProtKBA0A029LXP0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZJ89696.1};
InterProA0A029LXP0 
PFAMA0A029LXP0 
ProdomA0A029LXP0 
UniProtKBA0A069WYU2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU22719.1};
InterProA0A069WYU2 
PFAMA0A069WYU2 
ProdomA0A069WYU2 
UniProtKBA0A069XNR5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU31427.1};
InterProA0A069XNR5 
PFAMA0A069XNR5 
ProdomA0A069XNR5 
UniProtKBA0A070L132SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDW34448.1};
InterProA0A070L132 
PFAMA0A070L132 
ProdomA0A070L132 
UniProtKBA0A070SYY2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX19008.1};
InterProA0A070SYY2 
PFAMA0A070SYY2 
ProdomA0A070SYY2 
UniProtKBA0A070UHW2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX42137.1};
InterProA0A070UHW2 
PFAMA0A070UHW2 
ProdomA0A070UHW2 
UniProtKBA0A070Y029SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX84942.1};
InterProA0A070Y029 
PFAMA0A070Y029 
ProdomA0A070Y029 
UniProtKBA0A027TXA3SubName: Full=Ribosome-associated protein {ECO:0000313|EMBL:EZD29940.1};
InterProA0A027TXA3 
PFAMA0A027TXA3 
ProdomA0A027TXA3 
UniProtKBA0A026UFV4SubName: Full=Ribosome-associated protein {ECO:0000313|EMBL:EZA28759.1};
InterProA0A026UFV4 
PFAMA0A026UFV4 
ProdomA0A026UFV4 
UniProtKBA7ZIT7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ABV19808.1};
InterProA7ZIT7 
PFAMA7ZIT7 
ProdomA7ZIT7 
UniProtKBB3A4R4SubName: Full=Putative uncharacterized protein;
InterProB3A4R4 
PFAMB3A4R4 
ProdomB3A4R4 
UniProtKBB5YPP3SubName: Full=Uncharacterized protein;
InterProB5YPP3 
PFAMB5YPP3 
ProdomB5YPP3 
UniProtKBB6ZPB6SubName: Full=Uncharacterized protein;
InterProB6ZPB6 
PFAMB6ZPB6 
ProdomB6ZPB6 
UniProtKBB7L7F5SubName: Full=YbcJ protein {ECO:0000313|EMBL:CAU96415.1};
InterProB7L7F5 
PFAMB7L7F5 
ProdomB7L7F5 
UniProtKBB3X078SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EDX35093.1};
InterProB3X078 
PFAMB3X078 
ProdomB3X078 
UniProtKBB7NL22SubName: Full=Putative RNA-binding protein;
InterProB7NL22 
PFAMB7NL22 
ProdomB7NL22 
UniProtKBB7MRJ1SubName: Full=Putative RNA-binding protein {ECO:0000313|EMBL:CAR06757.1};
InterProB7MRJ1 
PFAMB7MRJ1 
ProdomB7MRJ1 
UniProtKBB7UKK5SubName: Full=Predicted RNA-binding protein {ECO:0000313|EMBL:CAS08009.1};
InterProB7UKK5 
PFAMB7UKK5 
ProdomB7UKK5 
UniProtKBB7ME51SubName: Full=Putative RNA-binding protein {ECO:0000313|EMBL:CAR01873.1};
InterProB7ME51 
PFAMB7ME51 
ProdomB7ME51 
UniProtKBB1IZ73SubName: Full=Putative uncharacterized protein;
InterProB1IZ73 
PFAMB1IZ73 
ProdomB1IZ73 
UniProtKBA0A071CFN4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY92711.1};
InterProA0A071CFN4 
PFAMA0A071CFN4 
ProdomA0A071CFN4 
UniProtKBA0A071D5J7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDZ36644.1};
InterProA0A071D5J7 
PFAMA0A071D5J7 
ProdomA0A071D5J7 
UniProtKBA0A0E2U2C0SubName: Full=Ribosome-associated protein {ECO:0000313|EMBL:EYV08248.1};
InterProA0A0E2U2C0 
PFAMA0A0E2U2C0 
ProdomA0A0E2U2C0 
UniProtKBA0A0F6C063SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFJ27619.1};
InterProA0A0F6C063 
PFAMA0A0F6C063 
ProdomA0A0F6C063 
UniProtKBA0A0F6E902SubName: Full=YbcJ {ECO:0000313|EMBL:AIL39323.1};
InterProA0A0F6E902 
PFAMA0A0F6E902 
ProdomA0A0F6E902 
UniProtKBA0A0G2S7Y4SubName: Full=Ribosome-associated protein {ECO:0000313|EMBL:AJM72705.1};
InterProA0A0G2S7Y4 
PFAMA0A0G2S7Y4 
ProdomA0A0G2S7Y4 
UniProtKBA0A0G2X5W9SubName: Full=Ribosome-associated protein {ECO:0000313|EMBL:AKI65582.1};
InterProA0A0G2X5W9 
PFAMA0A0G2X5W9 
ProdomA0A0G2X5W9 
UniProtKBA0A0H3PSQ4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EDU92120.1};
InterProA0A0H3PSQ4 
PFAMA0A0H3PSQ4 
ProdomA0A0H3PSQ4 
UniProtKBA0A0H4RQI2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKP83237.1};
InterProA0A0H4RQI2 
PFAMA0A0H4RQI2 
ProdomA0A0H4RQI2 
UniProtKBB2P218SubName: Full=Putative uncharacterized protein;
InterProB2P218 
PFAMB2P218 
ProdomB2P218 
UniProtKBB2TTB1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ACD06433.1};
InterProB2TTB1 
PFAMB2TTB1 
ProdomB2TTB1 
UniProtKBB3AYG0SubName: Full=Putative uncharacterized protein;
InterProB3AYG0 
PFAMB3AYG0 
ProdomB3AYG0 
UniProtKBA0A0E2L9N6SubName: Full=Ribosome-associated protein {ECO:0000313|EMBL:EQX32927.1};
InterProA0A0E2L9N6 
PFAMA0A0E2L9N6 
ProdomA0A0E2L9N6 
UniProtKBA0A0E1LU91SubName: Full=Putative RNA-binding protein {ECO:0000313|EMBL:AJF55291.1};
InterProA0A0E1LU91 
PFAMA0A0E1LU91 
ProdomA0A0E1LU91 
UniProtKBA0A0E0Y482SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFS75642.1};
InterProA0A0E0Y482 
PFAMA0A0E0Y482 
ProdomA0A0E0Y482 
UniProtKBA0A073GI55SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEJ65214.1};
InterProA0A073GI55 
PFAMA0A073GI55 
ProdomA0A073GI55 
UniProtKBA0A073GY71SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEJ70733.1};
InterProA0A073GY71 
PFAMA0A073GY71 
ProdomA0A073GY71 
UniProtKBA0A074IMP1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO15726.1};
InterProA0A074IMP1 
PFAMA0A074IMP1 
ProdomA0A074IMP1 
UniProtKBA0A079F0D2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY50137.1};
InterProA0A079F0D2 
PFAMA0A079F0D2 
ProdomA0A079F0D2 
UniProtKBA0A079GY60SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY96024.1};
InterProA0A079GY60 
PFAMA0A079GY60 
ProdomA0A079GY60 
UniProtKBA0A080ETR1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN52405.1};
InterProA0A080ETR1 
PFAMA0A080ETR1 
ProdomA0A080ETR1 
UniProtKBA0A080GXW2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN92300.1};
InterProA0A080GXW2 
PFAMA0A080GXW2 
ProdomA0A080GXW2 
UniProtKBA0A080IN09SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO28223.1};
InterProA0A080IN09 
PFAMA0A080IN09 
ProdomA0A080IN09 
UniProtKBA0A0A0FA03SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KGM59941.1};
InterProA0A0A0FA03 
PFAMA0A0A0FA03 
ProdomA0A0A0FA03 
UniProtKBA0A0A5NZL9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CDX05750.1};
InterProA0A0A5NZL9 
PFAMA0A0A5NZL9 
ProdomA0A0A5NZL9 
UniProtKBB3BFA8SubName: Full=Putative uncharacterized protein;
InterProB3BFA8 
PFAMB3BFA8 
ProdomB3BFA8 
UniProtKBB3AMQ2SubName: Full=Putative uncharacterized protein;
InterProB3AMQ2 
PFAMB3AMQ2 
ProdomB3AMQ2 
UniProtKBA0A017IN08SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EYD87419.1};
InterProA0A017IN08 
PFAMA0A017IN08 
ProdomA0A017IN08 
UniProtKBC4ZUX6SubName: Full=Predicted RNA-binding protein;
InterProC4ZUX6 
PFAMC4ZUX6 
ProdomC4ZUX6 
UniProtKBA0A026GR82SubName: Full=Ribosome-associated protein {ECO:0000313|EMBL:EYY73006.1};
InterProA0A026GR82 
PFAMA0A026GR82 
ProdomA0A026GR82 
UniProtKBA0A028DK63SubName: Full=Ribosome-associated protein {ECO:0000313|EMBL:EZE48272.1};
InterProA0A028DK63 
PFAMA0A028DK63 
ProdomA0A028DK63 
UniProtKBA0A070DFJ8SubName: Full=Ribosome-associated protein {ECO:0000313|EMBL:KDV39205.1};
InterProA0A070DFJ8 
PFAMA0A070DFJ8 
ProdomA0A070DFJ8 
UniProtKBA0A071AQH5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY56595.1};
InterProA0A071AQH5 
PFAMA0A071AQH5 
ProdomA0A071AQH5 
UniProtKBA0A074I3B6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO01353.1};
InterProA0A074I3B6 
PFAMA0A074I3B6 
ProdomA0A074I3B6 
UniProtKBA0A080FD49SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN59864.1};
InterProA0A080FD49 
PFAMA0A080FD49 
ProdomA0A080FD49 
UniProtKBA0A0E0TUH1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEE55225.1};
InterProA0A0E0TUH1 
PFAMA0A0E0TUH1 
ProdomA0A0E0TUH1 
UniProtKBA0A0E2U860SubName: Full=Ribosome-associated protein {ECO:0000313|EMBL:EZE26952.1};
InterProA0A0E2U860 
PFAMA0A0E2U860 
ProdomA0A0E2U860 
UniProtKBA0A0H3EG53SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ADR25931.1};
InterProA0A0H3EG53 
PFAMA0A0H3EG53 
ProdomA0A0H3EG53 
UniProtKBB7LJI6SubName: Full=Putative RNA-binding protein {ECO:0000313|EMBL:CAQ88117.1};
InterProB7LJI6 
PFAMB7LJI6 
ProdomB7LJI6 
UniProtKBB3HGH7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AIF61615.1};
InterProB3HGH7 
PFAMB3HGH7 
ProdomB3HGH7 
UniProtKBA0A0G3KDR5SubName: Full=Ribosome-associated protein {ECO:0000313|EMBL:AKK53051.1};
InterProA0A0G3KDR5 
PFAMA0A0G3KDR5 
ProdomA0A0G3KDR5 
UniProtKBA0A023YSS1SubName: Full=YbcJ {ECO:0000313|EMBL:AHY68830.1};
InterProA0A023YSS1 
PFAMA0A023YSS1 
ProdomA0A023YSS1 
UniProtKBA0A0G3I0C8SubName: Full=Ribosome-associated protein putative RNA-binding protein {ECO:0000313|EMBL:AKK16847.1};
InterProA0A0G3I0C8 
PFAMA0A0G3I0C8 
ProdomA0A0G3I0C8 
UniProtKBA0A025C9J0SubName: Full=Ribosome-associated protein {ECO:0000313|EMBL:EYV12352.1};
InterProA0A025C9J0 
PFAMA0A025C9J0 
ProdomA0A025C9J0 
UniProtKBA0A073TDA2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEL25812.1};
InterProA0A073TDA2 
PFAMA0A073TDA2 
ProdomA0A073TDA2 
UniProtKBA0A0G3K4H8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKK47167.1};
InterProA0A0G3K4H8 
PFAMA0A0G3K4H8 
ProdomA0A0G3K4H8 
UniProtKBB3XCV1SubName: Full=Putative uncharacterized protein;
InterProB3XCV1 
PFAMB3XCV1 
ProdomB3XCV1 
UniProtKBA0A025GJ70SubName: Full=Ribosome-associated protein {ECO:0000313|EMBL:EYV62740.1};
InterProA0A025GJ70 
PFAMA0A025GJ70 
ProdomA0A025GJ70 
UniProtKBA0A069Z1Q4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU53506.1};
InterProA0A069Z1Q4 
PFAMA0A069Z1Q4 
ProdomA0A069Z1Q4 
UniProtKBA0A073VP40SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEL81467.1};
InterProA0A073VP40 
PFAMA0A073VP40 
ProdomA0A073VP40 
UniProtKBA0A0C7MMA6SubName: Full=Ribosome-associated protein {ECO:0000313|EMBL:CEP56605.1};
InterProA0A0C7MMA6 
PFAMA0A0C7MMA6 
ProdomA0A0C7MMA6 
UniProtKBB2NR53SubName: Full=Putative uncharacterized protein;
InterProB2NR53 
PFAMB2NR53 
ProdomB2NR53 
UniProtKBB3I6F4SubName: Full=Putative uncharacterized protein;
InterProB3I6F4 
PFAMB3I6F4 
ProdomB3I6F4 
UniProtKBA0A074I5U1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO03686.1};
InterProA0A074I5U1 
PFAMA0A074I5U1 
ProdomA0A074I5U1 
UniProtKBA0A079FHS8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY57517.1};
InterProA0A079FHS8 
PFAMA0A079FHS8 
ProdomA0A079FHS8 
UniProtKBA0A080G4D7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN74184.1};
InterProA0A080G4D7 
PFAMA0A080G4D7 
ProdomA0A080G4D7 
UniProtKBA0A080JA74SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO38481.1};
InterProA0A080JA74 
PFAMA0A080JA74 
ProdomA0A080JA74 
UniProtKBA0A0E0V2M5SubName: Full=Ribosome-associated protein, predicted RNA-binding protein {ECO:0000313|EMBL:AEQ11345.1};
InterProA0A0E0V2M5 
PFAMA0A0E0V2M5 
ProdomA0A0E0V2M5 
UniProtKBA0A0E1ZUZ9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIL36341.1};
InterProA0A0E1ZUZ9 
PFAMA0A0E1ZUZ9 
ProdomA0A0E1ZUZ9 
UniProtKBA0A0E3KEC0SubName: Full=Uncharacterized protein YbcJ {ECO:0000313|EMBL:AKA89512.1};
InterProA0A0E3KEC0 
PFAMA0A0E3KEC0 
ProdomA0A0E3KEC0 
UniProtKBA0A0F6F290SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AJA24530.1};
InterProA0A0F6F290 
PFAMA0A0F6F290 
ProdomA0A0F6F290 
UniProtKBA0A0H3MMK3SubName: Full=Putative RNA-binding protein {ECO:0000313|EMBL:CAR16631.1};
InterProA0A0H3MMK3 
PFAMA0A0H3MMK3 
ProdomA0A0H3MMK3 
UniProtKBB2PFP3SubName: Full=Putative uncharacterized protein;
InterProB2PFP3 
PFAMB2PFP3 
ProdomB2PFP3 
UniProtKBA0A073G1D0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEJ51616.1};
InterProA0A073G1D0 
PFAMA0A073G1D0 
ProdomA0A073G1D0 
UniProtKBA0A071CDZ4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDZ17122.1};
InterProA0A071CDZ4 
PFAMA0A071CDZ4 
ProdomA0A071CDZ4 
UniProtKBA0A070UF40SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX36808.1};
InterProA0A070UF40 
PFAMA0A070UF40 
ProdomA0A070UF40 
UniProtKBB1LKE7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ACB16265.1};
InterProB1LKE7 
PFAMB1LKE7 
ProdomB1LKE7 
UniProtKBB7M4N1SubName: Full=Putative RNA-binding protein;
InterProB7M4N1 
PFAMB7M4N1 
ProdomB7M4N1 
UniProtKBB7N982SubName: Full=Putative RNA-binding protein {ECO:0000313|EMBL:CAR11783.1};
InterProB7N982 
PFAMB7N982 
ProdomB7N982 
UniProtKBB3WRS4SubName: Full=Putative uncharacterized protein;
InterProB3WRS4 
PFAMB3WRS4 
ProdomB3WRS4 
UniProtKBA0A026RWU5SubName: Full=Ribosome-associated protein {ECO:0000313|EMBL:EYZ97226.1};
InterProA0A026RWU5 
PFAMA0A026RWU5 
ProdomA0A026RWU5 
UniProtKBA0A027Z0A6SubName: Full=Ribosome-associated protein {ECO:0000313|EMBL:EZD92243.1};
InterProA0A027Z0A6 
PFAMA0A027Z0A6 
ProdomA0A027Z0A6 
UniProtKBA0A029IBB2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZJ45894.1};
InterProA0A029IBB2 
PFAMA0A029IBB2 
ProdomA0A029IBB2 
UniProtKBA0A062Y927SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDA59578.1};
InterProA0A062Y927 
PFAMA0A062Y927 
ProdomA0A062Y927 
UniProtKBA0A070FGB6SubName: Full=Ribosome-associated protein {ECO:0000313|EMBL:KDV61504.1};
InterProA0A070FGB6 
PFAMA0A070FGB6 
ProdomA0A070FGB6 
UniProtKBB1XGC6SubName: Full=Predicted RNA-binding protein;
InterProB1XGC6 
PFAMB1XGC6 
ProdomB1XGC6