University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P0AAT3
Original Database ID ref NP_415111.1
Organism Escherichia coli, Klebsiella pneumoniae, etc.
Annotation recname: full=uncharacterized
protein ybdf;
Sequence Length 122

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region2-119
Protein Length122
Template PDB Code2a1vA
Template Region5-128
Sequence Identity31%
E-Value0
GA3411
MPQS1.41481
z-DOPE-1.07
TSVMod MethodMTALL
TSVMod RMSD2.773
TSVMod NO350.768
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2a1vhypothetical protein from deinococcus radiodurans
DBALI2a1vA 
JenaImageLibrary2a1v 
Target Sequence
UniProtKBC5W0S3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ACT30089.1};
InterProC5W0S3 
PFAMC5W0S3 
ProdomC5W0S3 
UniProtKBA0A028A3Q7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZE05545.1};
InterProA0A028A3Q7 
PFAMA0A028A3Q7 
ProdomA0A028A3Q7 
UniProtKBA0A028B138SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZE17207.1};
InterProA0A028B138 
PFAMA0A028B138 
ProdomA0A028B138 
UniProtKBA0A029N0S5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZK03651.1};
InterProA0A029N0S5 
PFAMA0A029N0S5 
ProdomA0A029N0S5 
UniProtKBA0A029PUW3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZK25433.1};
InterProA0A029PUW3 
PFAMA0A029PUW3 
ProdomA0A029PUW3 
UniProtKBA0A069X4S6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU24987.1};
InterProA0A069X4S6 
PFAMA0A069X4S6 
ProdomA0A069X4S6 
UniProtKBA0A069XMN1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU31450.1};
InterProA0A069XMN1 
PFAMA0A069XMN1 
ProdomA0A069XMN1 
UniProtKBA0A070FFW8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDV61364.1};
InterProA0A070FFW8 
PFAMA0A070FFW8 
ProdomA0A070FFW8 
UniProtKBA0A070NUJ2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDW72292.1};
InterProA0A070NUJ2 
PFAMA0A070NUJ2 
ProdomA0A070NUJ2 
UniProtKBA0A070SYV6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX18983.1};
InterProA0A070SYV6 
PFAMA0A070SYV6 
ProdomA0A070SYV6 
UniProtKBA0A070XVI3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX82891.1};
InterProA0A070XVI3 
PFAMA0A070XVI3 
ProdomA0A070XVI3 
UniProtKBA0A027TEZ0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZD23825.1};
InterProA0A027TEZ0 
PFAMA0A027TEZ0 
ProdomA0A027TEZ0 
UniProtKBA0A026V584SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZA36977.1};
InterProA0A026V584 
PFAMA0A026V584 
ProdomA0A026V584 
UniProtKBA7ZXK2SubName: Full=Putative uncharacterized protein;
InterProA7ZXK2 
PFAMA7ZXK2 
ProdomA7ZXK2 
UniProtKBB7L8G1SubName: Full=YbdF protein {ECO:0000313|EMBL:CAU96443.1};
InterProB7L8G1 
PFAMB7L8G1 
ProdomB7L8G1 
UniProtKBC9R1E5SubName: Full=Uncharacterized protein;
InterProC9R1E5 
PFAMC9R1E5 
ProdomC9R1E5 
UniProtKBD3QLM0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ADD55363.1};
InterProD3QLM0 
PFAMD3QLM0 
ProdomD3QLM0 
UniProtKBD6HTF1SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EFE64633.2};
InterProD6HTF1 
PFAMD6HTF1 
ProdomD6HTF1 
UniProtKBC8TK99SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAI23980.1};
InterProC8TK99 
PFAMC8TK99 
ProdomC8TK99 
UniProtKBD8EE85SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFK43581.1};
InterProD8EE85 
PFAMD8EE85 
ProdomD8EE85 
UniProtKBD7ZXZ0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFK24238.1};
InterProD7ZXZ0 
PFAMD7ZXZ0 
ProdomD7ZXZ0 
UniProtKBD8EP95SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFK50672.1};
InterProD8EP95 
PFAMD8EP95 
ProdomD8EP95 
UniProtKBD7YRQ4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFK00018.1};
InterProD7YRQ4 
PFAMD7YRQ4 
ProdomD7YRQ4 
UniProtKBB1X5X4SubName: Full=Conserved protein;
InterProB1X5X4 
PFAMB1X5X4 
ProdomB1X5X4 
UniProtKBA0A071CDE0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDZ17099.1};
InterProA0A071CDE0 
PFAMA0A071CDE0 
ProdomA0A071CDE0 
UniProtKBA0A071D887SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDZ36621.1};
InterProA0A071D887 
PFAMA0A071D887 
ProdomA0A071D887 
UniProtKBA0A0G2XDP9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKI65603.1};
InterProA0A0G2XDP9 
PFAMA0A0G2XDP9 
ProdomA0A0G2XDP9 
UniProtKBA0A0H4RSS0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKP83294.1};
InterProA0A0H4RSS0 
PFAMA0A0H4RSS0 
ProdomA0A0H4RSS0 
UniProtKBA0A0I4V2G9SubName: Full=Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CTA93420.1};
InterProA0A0I4V2G9 
PFAMA0A0I4V2G9 
ProdomA0A0I4V2G9 
UniProtKBB1IYM9SubName: Full=Putative uncharacterized protein;
InterProB1IYM9 
PFAMB1IYM9 
ProdomB1IYM9 
UniProtKBB3A4U3SubName: Full=Putative uncharacterized protein;
InterProB3A4U3 
PFAMB3A4U3 
ProdomB3A4U3 
UniProtKBB2P1Z0SubName: Full=Putative uncharacterized protein;
InterProB2P1Z0 
PFAMB2P1Z0 
ProdomB2P1Z0 
UniProtKBB3XDA0SubName: Full=Putative uncharacterized protein;
InterProB3XDA0 
PFAMB3XDA0 
ProdomB3XDA0 
UniProtKBB3IK39SubName: Full=Putative uncharacterized protein;
InterProB3IK39 
PFAMB3IK39 
ProdomB3IK39 
UniProtKBB6ZP86SubName: Full=Uncharacterized protein;
InterProB6ZP86 
PFAMB6ZP86 
ProdomB6ZP86 
UniProtKBC3TKB2SubName: Full=Protein YbdF {ECO:0000313|EMBL:AJE54901.1};SubName: Full=Strain O157 SvETEC scaffold132.1, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ43475.1};SubName: Full=Uncharacterized prote
InterProC3TKB2 
PFAMC3TKB2 
ProdomC3TKB2 
UniProtKBA0A0F6F2C0SubName: Full=Putative cytoplasmic protein {ECO:0000313|EMBL:AJA24560.1};
InterProA0A0F6F2C0 
PFAMA0A0F6F2C0 
ProdomA0A0F6F2C0 
UniProtKBA0A0E3MZB8SubName: Full=Uncharacterized protein YbdF {ECO:0000313|EMBL:AKA89532.1};
InterProA0A0E3MZB8 
PFAMA0A0E3MZB8 
ProdomA0A0E3MZB8 
UniProtKBA0A0E1ZPU1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIL29874.1};
InterProA0A0E1ZPU1 
PFAMA0A0E1ZPU1 
ProdomA0A0E1ZPU1 
UniProtKBA0A073GJP4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEJ65088.1};
InterProA0A073GJP4 
PFAMA0A073GJP4 
ProdomA0A073GJP4 
UniProtKBA0A073H0E9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEJ70755.1};
InterProA0A073H0E9 
PFAMA0A073H0E9 
ProdomA0A073H0E9 
UniProtKBA0A079D0C8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY13952.1};
InterProA0A079D0C8 
PFAMA0A079D0C8 
ProdomA0A079D0C8 
UniProtKBA0A079F4J9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY50748.1};
InterProA0A079F4J9 
PFAMA0A079F4J9 
ProdomA0A079F4J9 
UniProtKBA0A079H4R6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY96048.1};
InterProA0A079H4R6 
PFAMA0A079H4R6 
ProdomA0A079H4R6 
UniProtKBA0A080EYZ6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN52121.1};
InterProA0A080EYZ6 
PFAMA0A080EYZ6 
ProdomA0A080EYZ6 
UniProtKBA0A080GTR5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN92261.1};
InterProA0A080GTR5 
PFAMA0A080GTR5 
ProdomA0A080GTR5 
UniProtKBA0A080IG32SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO28246.1};
InterProA0A080IG32 
PFAMA0A080IG32 
ProdomA0A080IG32 
UniProtKBA0A0A8U4G4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CEK03631.1};
InterProA0A0A8U4G4 
PFAMA0A0A8U4G4 
ProdomA0A0A8U4G4 
UniProtKBA0A0E0TUL4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEE55253.1};
InterProA0A0E0TUL4 
PFAMA0A0E0TUL4 
ProdomA0A0E0TUL4 
UniProtKBC4ZV23SubName: Full=Conserved protein;
InterProC4ZV23 
PFAMC4ZV23 
ProdomC4ZV23 
UniProtKBB7M4Q9SubName: Full=Uncharacterized protein;
InterProB7M4Q9 
PFAMB7M4Q9 
ProdomB7M4Q9 
UniProtKBA0A017K7U9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EYE07332.1};
InterProA0A017K7U9 
PFAMA0A017K7U9 
ProdomA0A017K7U9 
UniProtKBE0J7E5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFH10295.1};
InterProE0J7E5 
PFAME0J7E5 
ProdomE0J7E5 
UniProtKBA0A025GGE2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EYV63318.1};
InterProA0A025GGE2 
PFAMA0A025GGE2 
ProdomA0A025GGE2 
UniProtKBA0A028DL24SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZE48601.1};
InterProA0A028DL24 
PFAMA0A028DL24 
ProdomA0A028DL24 
UniProtKBA0A070D4B8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDV35851.1};
InterProA0A070D4B8 
PFAMA0A070D4B8 
ProdomA0A070D4B8 
UniProtKBA0A071AEB4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY58039.1};
InterProA0A071AEB4 
PFAMA0A071AEB4 
ProdomA0A071AEB4 
UniProtKBA0A074I6T2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO03217.1};
InterProA0A074I6T2 
PFAMA0A074I6T2 
ProdomA0A074I6T2 
UniProtKBA0A080FGS6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN59895.1};
InterProA0A080FGS6 
PFAMA0A080FGS6 
ProdomA0A080FGS6 
UniProtKBA0A0E1LYV2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AJF55319.1};
InterProA0A0E1LYV2 
PFAMA0A0E1LYV2 
ProdomA0A0E1LYV2 
UniProtKBA0A0H3PQX9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EDU91921.1};
InterProA0A0H3PQX9 
PFAMA0A0H3PQX9 
ProdomA0A0H3PQX9 
UniProtKBB3BTE0SubName: Full=Putative uncharacterized protein;
InterProB3BTE0 
PFAMB3BTE0 
ProdomB3BTE0 
UniProtKBD6J7Q2SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EFF14363.2};
InterProD6J7Q2 
PFAMD6J7Q2 
ProdomD6J7Q2 
UniProtKBC6EKC2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ACT30089.1};
InterProC6EKC2 
PFAMC6EKC2 
ProdomC6EKC2 
UniProtKBB3BFD6SubName: Full=Putative uncharacterized protein;
InterProB3BFD6 
PFAMB3BFD6 
ProdomB3BFD6 
UniProtKBA0A023YTB0SubName: Full=Putative cytoplasmic protein {ECO:0000313|EMBL:AHY69123.1};
InterProA0A023YTB0 
PFAMA0A023YTB0 
ProdomA0A023YTB0 
UniProtKBB3ARV5SubName: Full=Putative uncharacterized protein;
InterProB3ARV5 
PFAMB3ARV5 
ProdomB3ARV5 
UniProtKBA0A024KRX8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CDP67294.1};
InterProA0A024KRX8 
PFAMA0A024KRX8 
ProdomA0A024KRX8 
UniProtKBA0A073TDU8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEL25835.1};
InterProA0A073TDU8 
PFAMA0A073TDU8 
ProdomA0A073TDU8 
UniProtKBB2PFS1SubName: Full=Putative uncharacterized protein;
InterProB2PFS1 
PFAMB2PFS1 
ProdomB2PFS1 
UniProtKBC8UJP5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAI34578.1};
InterProC8UJP5 
PFAMC8UJP5 
ProdomC8UJP5 
UniProtKBA0A025CLV4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EYV14595.1};
InterProA0A025CLV4 
PFAMA0A025CLV4 
ProdomA0A025CLV4 
UniProtKBA0A069Z1N0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU53529.1};
InterProA0A069Z1N0 
PFAMA0A069Z1N0 
ProdomA0A069Z1N0 
UniProtKBA0A073VX98SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEL84716.1};
InterProA0A073VX98 
PFAMA0A073VX98 
ProdomA0A073VX98 
UniProtKBA0A0E0Y2S6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFS75615.1};
InterProA0A0E0Y2S6 
PFAMA0A0E0Y2S6 
ProdomA0A0E0Y2S6 
UniProtKBB3HJT5SubName: Full=Putative cytoplasmic protein {ECO:0000313|EMBL:AIF61593.1};
InterProB3HJT5 
PFAMB3HJT5 
ProdomB3HJT5 
UniProtKBC6UCH7SubName: Full=Putative uncharacterized protein ybdF;
InterProC6UCH7 
PFAMC6UCH7 
ProdomC6UCH7 
UniProtKBA0A074ISE2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO03519.1};
InterProA0A074ISE2 
PFAMA0A074ISE2 
ProdomA0A074ISE2 
UniProtKBA0A079FK23SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY58844.1};
InterProA0A079FK23 
PFAMA0A079FK23 
ProdomA0A079FK23 
UniProtKBA0A080G3T0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN73436.1};
InterProA0A080G3T0 
PFAMA0A080G3T0 
ProdomA0A080G3T0 
UniProtKBA0A090NJ08SubName: Full=Putative cytosolic protein {ECO:0000313|EMBL:ESU80315.1};
InterProA0A090NJ08 
PFAMA0A090NJ08 
ProdomA0A090NJ08 
UniProtKBA0A0E1T098SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EDU62862.1};
InterProA0A0E1T098 
PFAMA0A0E1T098 
ProdomA0A0E1T098 
UniProtKBA0A0F6C091SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFJ27647.1};
InterProA0A0F6C091 
PFAMA0A0F6C091 
ProdomA0A0F6C091 
UniProtKBA0A0H3X1E5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKM34149.1};
InterProA0A0H3X1E5 
PFAMA0A0H3X1E5 
ProdomA0A0H3X1E5 
UniProtKBA0A0J3Z1E1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KME72220.1};
InterProA0A0J3Z1E1 
PFAMA0A0J3Z1E1 
ProdomA0A0J3Z1E1 
UniProtKBB3AYD2SubName: Full=Putative uncharacterized protein;
InterProB3AYD2 
PFAMB3AYD2 
ProdomB3AYD2 
UniProtKBB5YPS2SubName: Full=Uncharacterized protein;
InterProB5YPS2 
PFAMB5YPS2 
ProdomB5YPS2 
UniProtKBA0A073G1C1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEJ51404.1};
InterProA0A073G1C1 
PFAMA0A073G1C1 
ProdomA0A073G1C1 
UniProtKBA0A071C5H2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY92687.1};
InterProA0A071C5H2 
PFAMA0A071C5H2 
ProdomA0A071C5H2 
UniProtKBA0A070PMN9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDW81684.1};
InterProA0A070PMN9 
PFAMA0A070PMN9 
ProdomA0A070PMN9 
UniProtKBB2N8P0SubName: Full=Putative uncharacterized protein;
InterProB2N8P0 
PFAMB2N8P0 
ProdomB2N8P0 
UniProtKBD7XX29SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFJ84045.1};
InterProD7XX29 
PFAMD7XX29 
ProdomD7XX29 
UniProtKBD8C0S8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFI87482.1};
InterProD8C0S8 
PFAMD8C0S8 
ProdomD8C0S8 
UniProtKBC6V092SubName: Full=Conserved protein;
InterProC6V092 
PFAMC6V092 
ProdomC6V092 
UniProtKBA0A026H049SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EYY76370.1};
InterProA0A026H049 
PFAMA0A026H049 
ProdomA0A026H049 
UniProtKBA0A027YXU8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZD91144.1};
InterProA0A027YXU8 
PFAMA0A027YXU8 
ProdomA0A027YXU8 
UniProtKBA0A029L0W9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZJ79039.1};
InterProA0A029L0W9 
PFAMA0A029L0W9 
ProdomA0A029L0W9 
UniProtKBA0A064U0C5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDH01609.1};
InterProA0A064U0C5 
PFAMA0A064U0C5 
ProdomA0A064U0C5 
UniProtKBA0A070DLN6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDV39119.1};
InterProA0A070DLN6 
PFAMA0A070DLN6 
ProdomA0A070DLN6 
UniProtKBB2NR82SubName: Full=Putative uncharacterized protein;
InterProB2NR82 
PFAMB2NR82 
ProdomB2NR82