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Model Details Page

Sequence Information

Primary Database Link A0A017K4V0
Original Database ID ref NP_415340.1
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation subname: full=putative l,d-transpeptidase
ybis {eco:0000313|embl:eye06233.1};
Sequence Length 306

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region23-306
Protein Length306
Template PDB Code4lzhA
Template Region21-304
Sequence Identity91%
E-Value0
GA3411
MPQS2.0493
z-DOPE-1.41
TSVMod MethodMSALL
TSVMod RMSD0.729
TSVMod NO350.955
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Sequence Model Coverage Summary
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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4lzh
DBALI4lzhA 
JenaImageLibrary4lzh 
Target Sequence
UniProtKBC8U491SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAI29705.1};
InterProC8U491 
PFAMC8U491 
ProdomC8U491 
UniProtKBA0A027ZLL3SubName: Full=L,D-transpeptidase {ECO:0000313|EMBL:EZD99598.1};
InterProA0A027ZLL3 
PFAMA0A027ZLL3 
ProdomA0A027ZLL3 
UniProtKBA0A028C1X3SubName: Full=L,D-transpeptidase {ECO:0000313|EMBL:EZE29548.1};
InterProA0A028C1X3 
PFAMA0A028C1X3 
ProdomA0A028C1X3 
UniProtKBA0A069X6J0SubName: Full=Putative L,D-transpeptidase YbiS {ECO:0000313|EMBL:KDU25389.1};
InterProA0A069X6J0 
PFAMA0A069X6J0 
ProdomA0A069X6J0 
UniProtKBA0A069XQ65SubName: Full=Putative L,D-transpeptidase YbiS {ECO:0000313|EMBL:KDU32101.1};
InterProA0A069XQ65 
PFAMA0A069XQ65 
ProdomA0A069XQ65 
UniProtKBA0A070D3R3SubName: Full=L,D-transpeptidase {ECO:0000313|EMBL:KDV35626.1};
InterProA0A070D3R3 
PFAMA0A070D3R3 
ProdomA0A070D3R3 
UniProtKBA0A070DCY5SubName: Full=L,D-transpeptidase {ECO:0000313|EMBL:KDV38831.1};
InterProA0A070DCY5 
PFAMA0A070DCY5 
ProdomA0A070DCY5 
UniProtKBA0A070Y2C0SubName: Full=Putative L,D-transpeptidase YbiS {ECO:0000313|EMBL:KDX85742.1};
InterProA0A070Y2C0 
PFAMA0A070Y2C0 
ProdomA0A070Y2C0 
UniProtKBA0A071CI54SubName: Full=Putative L,D-transpeptidase YbiS {ECO:0000313|EMBL:KDZ18628.1};
InterProA0A071CI54 
PFAMA0A071CI54 
ProdomA0A071CI54 
UniProtKBA0A073UQ13SubName: Full=Putative L,D-transpeptidase YbiS {ECO:0000313|EMBL:KEL70335.1};
InterProA0A073UQ13 
PFAMA0A073UQ13 
ProdomA0A073UQ13 
UniProtKBA0A073VT33SubName: Full=Putative L,D-transpeptidase YbiS {ECO:0000313|EMBL:KEL83605.1};
InterProA0A073VT33 
PFAMA0A073VT33 
ProdomA0A073VT33 
UniProtKBA0A026UV88SubName: Full=L,D-transpeptidase {ECO:0000313|EMBL:EZA32865.1};
InterProA0A026UV88 
PFAMA0A026UV88 
ProdomA0A026UV88 
UniProtKBA0A026RT74SubName: Full=L,D-transpeptidase {ECO:0000313|EMBL:EYZ95956.1};
InterProA0A026RT74 
PFAMA0A026RT74 
ProdomA0A026RT74 
UniProtKBA1A958SubName: Full=Putative uncharacterized protein ybiS;
InterProA1A958 
PFAMA1A958 
ProdomA1A958 
UniProtKBC6EIW3SubName: Full=ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:ACT29824.1};
InterProC6EIW3 
PFAMC6EIW3 
ProdomC6EIW3 
UniProtKBD6HUM1SubName: Full=YbiS protein {ECO:0000313|EMBL:EFE63358.2};
InterProD6HUM1 
PFAMD6HUM1 
ProdomD6HUM1 
UniProtKBD6I7V2SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EFF07127.2};
InterProD6I7V2 
PFAMD6I7V2 
ProdomD6I7V2 
UniProtKBD6ILP0SubName: Full=YbiS protein;
InterProD6ILP0 
PFAMD6ILP0 
ProdomD6ILP0 
UniProtKBD3QNN5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ADD55650.1};
InterProD3QNN5 
PFAMD3QNN5 
ProdomD3QNN5 
UniProtKBD7YEX3SubName: Full=ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:EFK04187.1};
InterProD7YEX3 
PFAMD7YEX3 
ProdomD7YEX3 
UniProtKBD7XVI1SubName: Full=ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:EFJ84654.1};
InterProD7XVI1 
PFAMD7XVI1 
ProdomD7XVI1 
UniProtKBD7Z5K7SubName: Full=ErfK/YbiS/YcfS/YnhG;
InterProD7Z5K7 
PFAMD7Z5K7 
ProdomD7Z5K7 
UniProtKBD7X0I8SubName: Full=ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:EFJ76209.1};
InterProD7X0I8 
PFAMD7X0I8 
ProdomD7X0I8 
UniProtKBB2N6U4SubName: Full=ErfK/YbiS/YcfS/YnhG family protein;
InterProB2N6U4 
PFAMB2N6U4 
ProdomB2N6U4 
UniProtKBA0A080G2Y7SubName: Full=Putative L,D-transpeptidase YbiS {ECO:0000313|EMBL:KEN72934.1};
InterProA0A080G2Y7 
PFAMA0A080G2Y7 
ProdomA0A080G2Y7 
UniProtKBA0A080GSW3SubName: Full=Putative L,D-transpeptidase YbiS {ECO:0000313|EMBL:KEN91808.1};
InterProA0A080GSW3 
PFAMA0A080GSW3 
ProdomA0A080GSW3 
UniProtKBA0A0I2SFE4SubName: Full=L%2CD-transpeptidase {ECO:0000313|EMBL:CSU81791.1};EC=2.-.-.- {ECO:0000313|EMBL:CSU81791.1};
InterProA0A0I2SFE4 
PFAMA0A0I2SFE4 
ProdomA0A0I2SFE4 
UniProtKBB1LMB1SubName: Full=YbiS protein {ECO:0000313|EMBL:ACB19595.1};
InterProB1LMB1 
PFAMB1LMB1 
ProdomB1LMB1 
UniProtKBB1IXE9SubName: Full=ErfK/YbiS/YcfS/YnhG family protein;Flags: Precursor;
InterProB1IXE9 
PFAMB1IXE9 
ProdomB1IXE9 
UniProtKBA7ZJN5SubName: Full=YbiS protein {ECO:0000313|EMBL:ABV21124.1};
InterProA7ZJN5 
PFAMA7ZJN5 
ProdomA7ZJN5 
UniProtKBB7M793SubName: Full=Uncharacterized protein;
InterProB7M793 
PFAMB7M793 
ProdomB7M793 
UniProtKBB6I7X7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAG76400.1};
InterProB6I7X7 
PFAMB6I7X7 
ProdomB6I7X7 
UniProtKBC3THI7SubName: Full=L%2CD-transpeptidase {ECO:0000313|EMBL:CKH93600.1};EC=2.-.-.- {ECO:0000313|EMBL:CKH93600.1};SubName: Full=L,D-transpeptidase {ECO:0000313|EMBL:AIZ86349.1};SubName: Full=L,D-transpeptidas
InterProC3THI7 
PFAMC3THI7 
ProdomC3THI7 
UniProtKBC2DKQ4SubName: Full=ErfK/YbiS/YcfS/YnhG;
InterProC2DKQ4 
PFAMC2DKQ4 
ProdomC2DKQ4 
UniProtKBC5W1R9SubName: Full=ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:ACT29824.1};
InterProC5W1R9 
PFAMC5W1R9 
ProdomC5W1R9 
UniProtKBC6V2I0SubName: Full=Conserved protein;
InterProC6V2I0 
PFAMC6V2I0 
ProdomC6V2I0 
UniProtKBA0A0H3X3E7SubName: Full=L,D-transpeptidase {ECO:0000313|EMBL:AKM34382.1};
InterProA0A0H3X3E7 
PFAMA0A0H3X3E7 
ProdomA0A0H3X3E7 
UniProtKBA0A0H3EEY1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ADR26165.1};
InterProA0A0H3EEY1 
PFAMA0A0H3EEY1 
ProdomA0A0H3EEY1 
UniProtKBA0A0H2YX74SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ABJ00198.1};
InterProA0A0H2YX74 
PFAMA0A0H2YX74 
ProdomA0A0H2YX74 
UniProtKBA0A090NEJ0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ESU78395.1};
InterProA0A090NEJ0 
PFAMA0A090NEJ0 
ProdomA0A090NEJ0 
UniProtKBA0A0A0FAU8SubName: Full=L,D-transpeptidase {ECO:0000313|EMBL:KGM59620.1};
InterProA0A0A0FAU8 
PFAMA0A0A0FAU8 
ProdomA0A0A0FAU8 
UniProtKBA0A0E1SV35SubName: Full=ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EDU63408.1};
InterProA0A0E1SV35 
PFAMA0A0E1SV35 
ProdomA0A0E1SV35 
UniProtKBA0A0E1ZQ49SubName: Full=L,D-transpeptidase {ECO:0000313|EMBL:EIL30640.1};
InterProA0A0E1ZQ49 
PFAMA0A0E1ZQ49 
ProdomA0A0E1ZQ49 
UniProtKBA0A0E2TRC1SubName: Full=L,D-transpeptidase {ECO:0000313|EMBL:EYV13048.1};
InterProA0A0E2TRC1 
PFAMA0A0E2TRC1 
ProdomA0A0E2TRC1 
UniProtKBA0A0E2U0G9SubName: Full=L,D-transpeptidase {ECO:0000313|EMBL:EZE18216.1};
InterProA0A0E2U0G9 
PFAMA0A0E2U0G9 
ProdomA0A0E2U0G9 
UniProtKBA0A0F6F368SubName: Full=L,D-transpeptidase YbiS {ECO:0000313|EMBL:AJA24858.1};
InterProA0A0F6F368 
PFAMA0A0F6F368 
ProdomA0A0F6F368 
UniProtKBA0A0F6GLJ4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAI54284.1};
InterProA0A0F6GLJ4 
PFAMA0A0F6GLJ4 
ProdomA0A0F6GLJ4 
UniProtKBA0A0G2X6R5SubName: Full=L,D-transpeptidase {ECO:0000313|EMBL:AKI65857.1};
InterProA0A0G2X6R5 
PFAMA0A0G2X6R5 
ProdomA0A0G2X6R5 
UniProtKBA0A0G3HJ19SubName: Full=L,D-transpeptidase linking Lpp to murein protein {ECO:0000313|EMBL:AKK13334.1};
InterProA0A0G3HJ19 
PFAMA0A0G3HJ19 
ProdomA0A0G3HJ19 
UniProtKBC8TLT4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAI24261.1};
InterProC8TLT4 
PFAMC8TLT4 
ProdomC8TLT4 
UniProtKBC6UDY2SubName: Full=Putative uncharacterized protein ybiS;
InterProC6UDY2 
PFAMC6UDY2 
ProdomC6UDY2 
UniProtKBA0A017K4V0SubName: Full=Putative L,D-transpeptidase YbiS {ECO:0000313|EMBL:EYE06233.1};
InterProA0A017K4V0 
PFAMA0A017K4V0 
ProdomA0A017K4V0 
UniProtKBD7ZC94SubName: Full=ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:EFJ82093.1};
InterProD7ZC94 
PFAMD7ZC94 
ProdomD7ZC94 
UniProtKBA0A025G3K6SubName: Full=L,D-transpeptidase {ECO:0000313|EMBL:EYV59319.1};
InterProA0A025G3K6 
PFAMA0A025G3K6 
ProdomA0A025G3K6 
UniProtKBA0A028E8X5SubName: Full=L,D-transpeptidase {ECO:0000313|EMBL:EZE56335.1};
InterProA0A028E8X5 
PFAMA0A028E8X5 
ProdomA0A028E8X5 
UniProtKBA0A070PXC9SubName: Full=Putative L,D-transpeptidase YbiS {ECO:0000313|EMBL:KDW84765.1};
InterProA0A070PXC9 
PFAMA0A070PXC9 
ProdomA0A070PXC9 
UniProtKBA0A074I928SubName: Full=Putative L,D-transpeptidase YbiS {ECO:0000313|EMBL:KEO03378.1};
InterProA0A074I928 
PFAMA0A074I928 
ProdomA0A074I928 
UniProtKBA0A0E0Y338SubName: Full=L,D-transpeptidase {ECO:0000313|EMBL:AFS75324.1};
InterProA0A0E0Y338 
PFAMA0A0E0Y338 
ProdomA0A0E0Y338 
UniProtKBA0A0E3MXB9SubName: Full=Putative L,D-transpeptidase YbiS {ECO:0000313|EMBL:AKA89798.1};
InterProA0A0E3MXB9 
PFAMA0A0E3MXB9 
ProdomA0A0E3MXB9 
UniProtKBA0A0G3JCG2SubName: Full=L,D-transpeptidase {ECO:0000313|EMBL:AKK38229.1};
InterProA0A0G3JCG2 
PFAMA0A0G3JCG2 
ProdomA0A0G3JCG2 
UniProtKBA0A0J3Z235SubName: Full=L,D-transpeptidase linking Lpp to murein {ECO:0000313|EMBL:KME72445.1};
InterProA0A0J3Z235 
PFAMA0A0J3Z235 
ProdomA0A0J3Z235 
UniProtKBB7UM15SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CAS08319.1};
InterProB7UM15 
PFAMB7UM15 
ProdomB7UM15 
UniProtKBD6J8D2SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EFF12147.2};
InterProD6J8D2 
PFAMD6J8D2 
ProdomD6J8D2 
UniProtKBC9R032SubName: Full=ErfK/YbiS/YcfS/YnhG family protein;SubName: Full=Uncharacterized protein;Flags: Precursor;
InterProC9R032 
PFAMC9R032 
ProdomC9R032 
UniProtKBB7NNQ0SubName: Full=Uncharacterized protein;
InterProB7NNQ0 
PFAMB7NNQ0 
ProdomB7NNQ0 
UniProtKBA0A023YUH3SubName: Full=L,D-transpeptidase YbiS {ECO:0000313|EMBL:AHY69410.1};
InterProA0A023YUH3 
PFAMA0A023YUH3 
ProdomA0A023YUH3 
UniProtKBB7MGS7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CAR02175.1};
InterProB7MGS7 
PFAMB7MGS7 
ProdomB7MGS7 
UniProtKBA0A024KQ49SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CDP67065.1};
InterProA0A024KQ49 
PFAMA0A024KQ49 
ProdomA0A024KQ49 
UniProtKBA0A0A8U540SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CEK03903.1};
InterProA0A0A8U540 
PFAMA0A0A8U540 
ProdomA0A0A8U540 
UniProtKBB7LCA1SubName: Full=YbiS protein {ECO:0000313|EMBL:CAU96728.1};
InterProB7LCA1 
PFAMB7LCA1 
ProdomB7LCA1 
UniProtKBD5CY23SubName: Full=YbiS protein;
InterProD5CY23 
PFAMD5CY23 
ProdomD5CY23 
UniProtKBA0A025C840SubName: Full=L,D-transpeptidase {ECO:0000313|EMBL:EYV11809.1};
InterProA0A025C840 
PFAMA0A025C840 
ProdomA0A025C840 
UniProtKBA0A070F3P2SubName: Full=L,D-transpeptidase {ECO:0000313|EMBL:KDV59752.1};
InterProA0A070F3P2 
PFAMA0A070F3P2 
ProdomA0A070F3P2 
UniProtKBA0A0E0V2D0SubName: Full=L,D-transpeptidase linking Lpp to murein {ECO:0000313|EMBL:AEQ11664.1};
InterProA0A0E0V2D0 
PFAMA0A0E0V2D0 
ProdomA0A0E0V2D0 
UniProtKBA0A0G3JC45SubName: Full=L,D-transpeptidase {ECO:0000313|EMBL:AKK36766.1};
InterProA0A0G3JC45 
PFAMA0A0G3JC45 
ProdomA0A0G3JC45 
UniProtKBC1HGZ6SubName: Full=Protein ErfK/srfK;
InterProC1HGZ6 
PFAMC1HGZ6 
ProdomC1HGZ6 
UniProtKBD2NFH8SubName: Full=Uncharacterized protein;
InterProD2NFH8 
PFAMD2NFH8 
ProdomD2NFH8 
UniProtKBA0A0E1LUY3SubName: Full=L,D-transpeptidase linking Lpp to murein {ECO:0000313|EMBL:AJF55541.1};
InterProA0A0E1LUY3 
PFAMA0A0E1LUY3 
ProdomA0A0E1LUY3 
UniProtKBA0A0E2LM46SubName: Full=L,D-transpeptidase linking Lpp to murein {ECO:0000313|EMBL:EQX30674.1};
InterProA0A0E2LM46 
PFAMA0A0E2LM46 
ProdomA0A0E2LM46 
UniProtKBA0A0F6C116SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFJ27922.1};
InterProA0A0F6C116 
PFAMA0A0F6C116 
ProdomA0A0F6C116 
UniProtKBA0A0G2S747SubName: Full=L,D-transpeptidase {ECO:0000313|EMBL:AJM72911.1};
InterProA0A0G2S747 
PFAMA0A0G2S747 
ProdomA0A0G2S747 
UniProtKBA0A0G3K076SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKK47420.1};
InterProA0A0G3K076 
PFAMA0A0G3K076 
ProdomA0A0G3K076 
UniProtKBA0A0H3MN64SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CAR16933.1};
InterProA0A0H3MN64 
PFAMA0A0H3MN64 
ProdomA0A0H3MN64 
UniProtKBB1X7E9SubName: Full=Conserved protein;
InterProB1X7E9 
PFAMB1X7E9 
ProdomB1X7E9 
UniProtKBA7ZY78SubName: Full=YbiS protein;
InterProA7ZY78 
PFAMA7ZY78 
ProdomA7ZY78 
UniProtKBB7NAF9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CAR12212.1};
InterProB7NAF9 
PFAMB7NAF9 
ProdomB7NAF9 
UniProtKBC4ZXZ1SubName: Full=Conserved protein;
InterProC4ZXZ1 
PFAMC4ZXZ1 
ProdomC4ZXZ1 
UniProtKBA0A080JBM5SubName: Full=Putative L,D-transpeptidase YbiS {ECO:0000313|EMBL:KEO36933.1};
InterProA0A080JBM5 
PFAMA0A080JBM5 
ProdomA0A080JBM5 
UniProtKBA0A079H115SubName: Full=Putative L,D-transpeptidase YbiS {ECO:0000313|EMBL:KDY98250.1};
InterProA0A079H115 
PFAMA0A079H115 
ProdomA0A079H115 
UniProtKBA0A073TH43SubName: Full=Putative L,D-transpeptidase YbiS {ECO:0000313|EMBL:KEL27409.1};
InterProA0A073TH43 
PFAMA0A073TH43 
ProdomA0A073TH43 
UniProtKBB2TVA9SubName: Full=YbiS protein {ECO:0000313|EMBL:ACD09835.1};
InterProB2TVA9 
PFAMB2TVA9 
ProdomB2TVA9 
UniProtKBD7JLH5SubName: Full=YbiS protein;
InterProD7JLH5 
PFAMD7JLH5 
ProdomD7JLH5 
UniProtKBD7Y822SubName: Full=ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:EFJ96201.1};
InterProD7Y822 
PFAMD7Y822 
ProdomD7Y822 
UniProtKBD3GZ62SubName: Full=Putative exported protein {ECO:0000313|EMBL:CBG33733.1};
InterProD3GZ62 
PFAMD3GZ62 
ProdomD3GZ62 
UniProtKBA0A026GQL4SubName: Full=L,D-transpeptidase {ECO:0000313|EMBL:EYY72796.1};
InterProA0A026GQL4 
PFAMA0A026GQL4 
ProdomA0A026GQL4 
UniProtKBA0A027YZ71SubName: Full=L,D-transpeptidase {ECO:0000313|EMBL:EZD91614.1};
InterProA0A027YZ71 
PFAMA0A027YZ71 
ProdomA0A027YZ71 
UniProtKBA0A064U0D8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDH00655.1};
InterProA0A064U0D8 
PFAMA0A064U0D8 
ProdomA0A064U0D8 
UniProtKBA0A069Z6C8SubName: Full=Putative L,D-transpeptidase YbiS {ECO:0000313|EMBL:KDU55228.1};
InterProA0A069Z6C8 
PFAMA0A069Z6C8 
ProdomA0A069Z6C8 
UniProtKBA0A070U401SubName: Full=Putative L,D-transpeptidase YbiS {ECO:0000313|EMBL:KDX36515.1};
InterProA0A070U401 
PFAMA0A070U401 
ProdomA0A070U401 
UniProtKBB3I7D1SubName: Full=YbiS protein;
InterProB3I7D1 
PFAMB3I7D1 
ProdomB3I7D1