University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A0A026UKF8
Original Database ID ref NP_416718.1
Organism Escherichia coli, Shigella boydii, etc.
Annotation subname: full=thiamine biosynthesis
protein apbe {eco:0000313|embl:eza30309.1};
Sequence Length 351

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region31-347
Protein Length351
Template PDB Code4xgwA
Template Region12-328
Sequence Identity100%
E-Value0
GA3411
MPQS2.09603
z-DOPE-1.43
TSVMod MethodMSALL
TSVMod RMSD0.755
TSVMod NO350.941
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4xgw
DBALI4xgwA 
JenaImageLibrary4xgw 
Target Sequence
UniProtKBC3T347SubName: Full=Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:CEE09930.1};SubName: Full=Thiamine biosynthesis lipoprotein apbE {ECO:0000313|EMBL:KGM70466.1};SubName: Full=Thiamine biosynthesi
InterProC3T347 
PFAMC3T347 
ProdomC3T347 
UniProtKBA0A073GS68SubName: Full=Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:KEJ67771.1};
InterProA0A073GS68 
PFAMA0A073GS68 
ProdomA0A073GS68 
UniProtKBA0A074IAA3SubName: Full=Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:KEN97312.1};
InterProA0A074IAA3 
PFAMA0A074IAA3 
ProdomA0A074IAA3 
UniProtKBA0A079H6X3SubName: Full=Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:KDY99159.1};
InterProA0A079H6X3 
PFAMA0A079H6X3 
ProdomA0A079H6X3 
UniProtKBA0A080GNB4SubName: Full=Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:KEN89827.1};
InterProA0A080GNB4 
PFAMA0A080GNB4 
ProdomA0A080GNB4 
UniProtKBA0A0E1SYI9SubName: Full=Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:EDU62252.1};
InterProA0A0E1SYI9 
PFAMA0A0E1SYI9 
ProdomA0A0E1SYI9 
UniProtKBA0A0E3KFX3SubName: Full=FAD:protein FMN transferase {ECO:0000313|EMBL:AKA91293.1};
InterProA0A0E3KFX3 
PFAMA0A0E3KFX3 
ProdomA0A0E3KFX3 
UniProtKBA0A0H3PXR3SubName: Full=Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:EDU91304.1};
InterProA0A0H3PXR3 
PFAMA0A0H3PXR3 
ProdomA0A0H3PXR3 
UniProtKBE7TN22SubName: Full=Thiamin biosynthesis lipoprotein ApbE;
InterProE7TN22 
PFAME7TN22 
ProdomE7TN22 
UniProtKBE6B9N9SubName: Full=Thiamine biosynthesis lipoprotein apbE {ECO:0000313|EMBL:EFU96107.1};
InterProE6B9N9 
PFAME6B9N9 
ProdomE6B9N9 
UniProtKBE8HX23SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProE8HX23 
PFAME8HX23 
ProdomE8HX23 
UniProtKBA0A071CKT0SubName: Full=Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:KDZ19513.1};
InterProA0A071CKT0 
PFAMA0A071CKT0 
ProdomA0A071CKT0 
UniProtKBA0A071C2K9SubName: Full=Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:KDY92175.1};
InterProA0A071C2K9 
PFAMA0A071C2K9 
ProdomA0A071C2K9 
UniProtKBE2JTN9SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProE2JTN9 
PFAME2JTN9 
ProdomE2JTN9 
UniProtKBH6MHK2SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProH6MHK2 
PFAMH6MHK2 
ProdomH6MHK2 
UniProtKBC4ZU57SubName: Full=Predicted thiamine biosynthesis lipoprotein;
InterProC4ZU57 
PFAMC4ZU57 
ProdomC4ZU57 
UniProtKBI2PAG0SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProI2PAG0 
PFAMI2PAG0 
ProdomI2PAG0 
UniProtKBI2R0I4SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProI2R0I4 
PFAMI2R0I4 
ProdomI2R0I4 
UniProtKBC6ULM6SubName: Full=Predicted thiamine biosynthesis lipoprotein;
InterProC6ULM6 
PFAMC6ULM6 
ProdomC6ULM6 
UniProtKBC6V2V0SubName: Full=Predicted thiamine biosynthesis lipoprotein;
InterProC6V2V0 
PFAMC6V2V0 
ProdomC6V2V0 
UniProtKBI2YKF9SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProI2YKF9 
PFAMI2YKF9 
ProdomI2YKF9 
UniProtKBD3QK03SubName: Full=Thiamine biosynthesis lipoprotein apbE {ECO:0000313|EMBL:ADD57299.1};
InterProD3QK03 
PFAMD3QK03 
ProdomD3QK03 
UniProtKBD7ZXY3SubName: Full=ApbE family protein {ECO:0000313|EMBL:EFK24304.1};
InterProD7ZXY3 
PFAMD7ZXY3 
ProdomD7ZXY3 
UniProtKBD8B9I1SubName: Full=ApbE family protein {ECO:0000313|EMBL:EFJ64246.1};
InterProD8B9I1 
PFAMD8B9I1 
ProdomD8B9I1 
UniProtKBE3PDR6SubName: Full=Thiamine biosynthesis lipoprotein {ECO:0000313|EMBL:CBJ01852.1};
InterProE3PDR6 
PFAME3PDR6 
ProdomE3PDR6 
UniProtKBE2KNQ6SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProE2KNQ6 
PFAME2KNQ6 
ProdomE2KNQ6 
UniProtKBH4SUD5SubName: Full=ApbE family protein;
InterProH4SUD5 
PFAMH4SUD5 
ProdomH4SUD5 
UniProtKBB2N6I5SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProB2N6I5 
PFAMB2N6I5 
ProdomB2N6I5 
UniProtKBH4R1J0SubName: Full=ApbE family protein;
InterProH4R1J0 
PFAMH4R1J0 
ProdomH4R1J0 
UniProtKBE8ING5SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProE8ING5 
PFAME8ING5 
ProdomE8ING5 
UniProtKBB2P6K4SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProB2P6K4 
PFAMB2P6K4 
ProdomB2P6K4 
UniProtKBB3AL10SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProB3AL10 
PFAMB3AL10 
ProdomB3AL10 
UniProtKBH4X740SubName: Full=ApbE family protein;
InterProH4X740 
PFAMH4X740 
ProdomH4X740 
UniProtKBH4WBS2SubName: Full=ApbE family protein;
InterProH4WBS2 
PFAMH4WBS2 
ProdomH4WBS2 
UniProtKBB3BH47SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProB3BH47 
PFAMB3BH47 
ProdomB3BH47 
UniProtKBI0ZUL1SubName: Full=ApbE family protein;
InterProI0ZUL1 
PFAMI0ZUL1 
ProdomI0ZUL1 
UniProtKBE1HSX7SubName: Full=ApbE family protein {ECO:0000313|EMBL:EFK89032.1};
InterProE1HSX7 
PFAME1HSX7 
ProdomE1HSX7 
UniProtKBH4RHQ0SubName: Full=ApbE family protein;
InterProH4RHQ0 
PFAMH4RHQ0 
ProdomH4RHQ0 
UniProtKBH4LW28SubName: Full=ApbE family protein;
InterProH4LW28 
PFAMH4LW28 
ProdomH4LW28 
UniProtKBE9Y128SubName: Full=ApbE family protein;
InterProE9Y128 
PFAME9Y128 
ProdomE9Y128 
UniProtKBE9YBJ3SubName: Full=ApbE family protein {ECO:0000313|EMBL:EGB68279.1};
InterProE9YBJ3 
PFAME9YBJ3 
ProdomE9YBJ3 
UniProtKBE9WGQ9SubName: Full=ApbE family protein;
InterProE9WGQ9 
PFAME9WGQ9 
ProdomE9WGQ9 
UniProtKBG2AIA4SubName: Full=Thiamine biosynthesis lipoprotein apbE {ECO:0000313|EMBL:EGW90260.1};
InterProG2AIA4 
PFAMG2AIA4 
ProdomG2AIA4 
UniProtKBG0FDC7SubName: Full=Thiamine biosynthesis lipoprotein apbE {ECO:0000313|EMBL:AEJ57380.1};
InterProG0FDC7 
PFAMG0FDC7 
ProdomG0FDC7 
UniProtKBG2EZT2SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProG2EZT2 
PFAMG2EZT2 
ProdomG2EZT2 
UniProtKBF9R521SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProF9R521 
PFAMF9R521 
ProdomF9R521 
UniProtKBE8J3K3SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProE8J3K3 
PFAME8J3K3 
ProdomE8J3K3 
UniProtKBH4NQZ8SubName: Full=ApbE family protein;
InterProH4NQZ8 
PFAMH4NQZ8 
ProdomH4NQZ8 
UniProtKBH4MBS9SubName: Full=ApbE family protein;
InterProH4MBS9 
PFAMH4MBS9 
ProdomH4MBS9 
UniProtKBB5YX06SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProB5YX06 
PFAMB5YX06 
ProdomB5YX06 
UniProtKBH9UUF7SubName: Full=Thiamine biosynthesis lipoprotein apbE {ECO:0000313|EMBL:AFG41150.1};
InterProH9UUF7 
PFAMH9UUF7 
ProdomH9UUF7 
UniProtKBA0A026UKF8SubName: Full=Thiamine biosynthesis protein ApbE {ECO:0000313|EMBL:EZA30309.1};
InterProA0A026UKF8 
PFAMA0A026UKF8 
ProdomA0A026UKF8 
UniProtKBC9QR93SubName: Full=ApbE family lipoprotein;SubName: Full=Thiamine biosynthesis lipoprotein;
InterProC9QR93 
PFAMC9QR93 
ProdomC9QR93 
UniProtKBA0A070SWJ7SubName: Full=Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:KDX21830.1};
InterProA0A070SWJ7 
PFAMA0A070SWJ7 
ProdomA0A070SWJ7 
UniProtKBA0A079FF70SubName: Full=Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:KDY55566.1};
InterProA0A079FF70 
PFAMA0A079FF70 
ProdomA0A079FF70 
UniProtKBA0A0F6F9J1SubName: Full=Thiamin biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:AJA27081.1};
InterProA0A0F6F9J1 
PFAMA0A0F6F9J1 
ProdomA0A0F6F9J1 
UniProtKBE8IAF8SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProE8IAF8 
PFAME8IAF8 
ProdomE8IAF8 
UniProtKBF4SG57SubName: Full=Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:EGI11862.1};
InterProF4SG57 
PFAMF4SG57 
ProdomF4SG57 
UniProtKBH0QDH1SubName: Full=Predicted thiamine biosynthesis lipoprotein;
InterProH0QDH1 
PFAMH0QDH1 
ProdomH0QDH1 
UniProtKBH4Q3U5SubName: Full=ApbE family protein;
InterProH4Q3U5 
PFAMH4Q3U5 
ProdomH4Q3U5 
UniProtKBB1X8B0SubName: Full=Predicted thiamine biosynthesis lipoprotein;
InterProB1X8B0 
PFAMB1X8B0 
ProdomB1X8B0 
UniProtKBB3A5K1SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProB3A5K1 
PFAMB3A5K1 
ProdomB3A5K1 
UniProtKBI2XIP6SubName: Full=Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:EII48866.1};
InterProI2XIP6 
PFAMI2XIP6 
ProdomI2XIP6 
UniProtKBB6ZY89SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProB6ZY89 
PFAMB6ZY89 
ProdomB6ZY89 
UniProtKBH4VIJ7SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProH4VIJ7 
PFAMH4VIJ7 
ProdomH4VIJ7 
UniProtKBA0A027YI59SubName: Full=Thiamine biosynthesis protein ApbE {ECO:0000313|EMBL:EZD86486.1};
InterProA0A027YI59 
PFAMA0A027YI59 
ProdomA0A027YI59 
UniProtKBH4TQL9SubName: Full=ApbE family protein;
InterProH4TQL9 
PFAMH4TQL9 
ProdomH4TQL9 
UniProtKBA0A069XSU4SubName: Full=Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:KDU33039.1};
InterProA0A069XSU4 
PFAMA0A069XSU4 
ProdomA0A069XSU4 
UniProtKBE9WW86SubName: Full=ApbE family protein;
InterProE9WW86 
PFAME9WW86 
ProdomE9WW86 
UniProtKBB2PIB5SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProB2PIB5 
PFAMB2PIB5 
ProdomB2PIB5 
UniProtKBC5W6V4SubName: Full=ApbE family lipoprotein {ECO:0000313|EMBL:ACT28507.1};
InterProC5W6V4 
PFAMC5W6V4 
ProdomC5W6V4 
UniProtKBA0A069Z3Z0SubName: Full=Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:KDU53643.1};
InterProA0A069Z3Z0 
PFAMA0A069Z3Z0 
ProdomA0A069Z3Z0 
UniProtKBA0A0F6C6S0SubName: Full=Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:AFJ29926.1};
InterProA0A0F6C6S0 
PFAMA0A0F6C6S0 
ProdomA0A0F6C6S0 
UniProtKBF1YAG3SubName: Full=Thiamin biosynthesis lipoprotein ApbE;
InterProF1YAG3 
PFAMF1YAG3 
ProdomF1YAG3 
UniProtKBH4PN18SubName: Full=ApbE family protein;
InterProH4PN18 
PFAMH4PN18 
ProdomH4PN18 
UniProtKBH4VYP9SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProH4VYP9 
PFAMH4VYP9 
ProdomH4VYP9 
UniProtKBI1ZY02SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProI1ZY02 
PFAMI1ZY02 
ProdomI1ZY02 
UniProtKBF1XNX7SubName: Full=Thiamin biosynthesis lipoprotein ApbE;
InterProF1XNX7 
PFAMF1XNX7 
ProdomF1XNX7 
UniProtKBG2AWY1SubName: Full=Thiamine biosynthesis lipoprotein apbE;
InterProG2AWY1 
PFAMG2AWY1 
ProdomG2AWY1 
UniProtKBG2CMJ8SubName: Full=Thiamine biosynthesis lipoprotein apbE;
InterProG2CMJ8 
PFAMG2CMJ8 
ProdomG2CMJ8 
UniProtKBH4N928SubName: Full=ApbE family protein;
InterProH4N928 
PFAMH4N928 
ProdomH4N928 
UniProtKBH4P7Q5SubName: Full=ApbE family protein;
InterProH4P7Q5 
PFAMH4P7Q5 
ProdomH4P7Q5 
UniProtKBH4RYE5SubName: Full=ApbE family protein;
InterProH4RYE5 
PFAMH4RYE5 
ProdomH4RYE5 
UniProtKBH4SDG5SubName: Full=ApbE family protein;
InterProH4SDG5 
PFAMH4SDG5 
ProdomH4SDG5 
UniProtKBB2NLR9SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProB2NLR9 
PFAMB2NLR9 
ProdomB2NLR9 
UniProtKBH4U4W0SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProH4U4W0 
PFAMH4U4W0 
ProdomH4U4W0 
UniProtKBB3B9C0SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProB3B9C0 
PFAMB3B9C0 
ProdomB3B9C0 
UniProtKBE2K7T2SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProE2K7T2 
PFAME2K7T2 
ProdomE2K7T2 
UniProtKBE8HHY9SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProE8HHY9 
PFAME8HHY9 
ProdomE8HHY9 
UniProtKBE8H470SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProE8H470 
PFAME8H470 
ProdomE8H470 
UniProtKBH4TA04SubName: Full=ApbE family protein;
InterProH4TA04 
PFAMH4TA04 
ProdomH4TA04 
UniProtKBC6E9Y5SubName: Full=ApbE family lipoprotein {ECO:0000313|EMBL:ACT28507.1};
InterProC6E9Y5 
PFAMC6E9Y5 
ProdomC6E9Y5 
UniProtKBI2ZUV4SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProI2ZUV4 
PFAMI2ZUV4 
ProdomI2ZUV4 
UniProtKBI2I7R3SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProI2I7R3 
PFAMI2I7R3 
ProdomI2I7R3 
UniProtKBA0A070YG70SubName: Full=Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:KDX89499.1};
InterProA0A070YG70 
PFAMA0A070YG70 
ProdomA0A070YG70 
UniProtKBA0A071DZ40SubName: Full=Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:KDZ41730.1};
InterProA0A071DZ40 
PFAMA0A071DZ40 
ProdomA0A071DZ40 
UniProtKBA0A079G1I6SubName: Full=Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:KDY68376.1};
InterProA0A079G1I6 
PFAMA0A079G1I6 
ProdomA0A079G1I6 
UniProtKBA0A080HZU5SubName: Full=Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:KEO23334.1};
InterProA0A080HZU5 
PFAMA0A080HZU5 
ProdomA0A080HZU5 
UniProtKBA0A0G3I200SubName: Full=Putative thiamine biosynthesis lipoprotein {ECO:0000313|EMBL:AKK18178.1};
InterProA0A0G3I200 
PFAMA0A0G3I200 
ProdomA0A0G3I200 
UniProtKBB3X9G6SubName: Full=Thiamine biosynthesis lipoprotein ApbE;
InterProB3X9G6 
PFAMB3X9G6 
ProdomB3X9G6