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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A2UDT8
Original Database ID ref NP_414848.1
Organism Escherichia coli, Shigella boydii, etc.
Annotation choline/carnitine/betaine transporter.
Sequence Length 677

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region12-534
Protein Length677
Template PDB Code4c7rA
Template Region57-578
Sequence Identity35%
E-Value0
GA3411
MPQS1.32583
z-DOPE-1.32
TSVMod MethodMSRED
TSVMod RMSD16.088
TSVMod NO350.004
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

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Template Structure
PDB4c7r
DBALI4c7rA 
JenaImageLibrary4c7r 
Target Sequence
UniProtKBC6UY29SubName: Full=Choline transporter of high affinity;
InterProC6UY29 
PFAMC6UY29 
ProdomC6UY29 
UniProtKBA0A029LX41SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:EZJ90235.1};
InterProA0A029LX41 
PFAMA0A029LX41 
ProdomA0A029LX41 
UniProtKBA0A029N3D0SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:EZK04028.1};
InterProA0A029N3D0 
PFAMA0A029N3D0 
ProdomA0A029N3D0 
UniProtKBA0A069XIU2SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KDU29845.1};
InterProA0A069XIU2 
PFAMA0A069XIU2 
ProdomA0A069XIU2 
UniProtKBA0A069YWF0SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KDU51494.1};
InterProA0A069YWF0 
PFAMA0A069YWF0 
ProdomA0A069YWF0 
UniProtKBA0A070F7H5SubName: Full=Choline transporter {ECO:0000313|EMBL:KDV61715.1};
InterProA0A070F7H5 
PFAMA0A070F7H5 
ProdomA0A070F7H5 
UniProtKBA0A070SP51SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KDX19125.1};
InterProA0A070SP51 
PFAMA0A070SP51 
ProdomA0A070SP51 
UniProtKBA0A071CPS0SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KDZ16638.1};
InterProA0A071CPS0 
PFAMA0A071CPS0 
ProdomA0A071CPS0 
UniProtKBA0A071D5L8SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KDZ36328.1};
InterProA0A071D5L8 
PFAMA0A071D5L8 
ProdomA0A071D5L8 
UniProtKBA0A073GLD8SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KEJ65699.1};
InterProA0A073GLD8 
PFAMA0A073GLD8 
ProdomA0A073GLD8 
UniProtKBA0A073H1W0SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KEJ71270.1};
InterProA0A073H1W0 
PFAMA0A073H1W0 
ProdomA0A073H1W0 
UniProtKBA0A028E7S7SubName: Full=Choline transporter {ECO:0000313|EMBL:EZE55978.1};
InterProA0A028E7S7 
PFAMA0A028E7S7 
ProdomA0A028E7S7 
UniProtKBA0A028BJ69SubName: Full=Choline transporter {ECO:0000313|EMBL:EZE23225.1};
InterProA0A028BJ69 
PFAMA0A028BJ69 
ProdomA0A028BJ69 
UniProtKBA7ZI55SubName: Full=Transporter, betaine/carnitine/choline transporter (BCCT) family {ECO:0000313|EMBL:ABV20482.1};
InterProA7ZI55 
PFAMA7ZI55 
ProdomA7ZI55 
UniProtKBC3TNC7SubName: Full=Choline transport protein BetT {ECO:0000313|EMBL:CDP72698.1};SubName: Full=Choline transporter {ECO:0000313|EMBL:AIZ85861.1};SubName: Full=Choline transporter of high affinity {ECO:00003
InterProC3TNC7 
PFAMC3TNC7 
ProdomC3TNC7 
UniProtKBD3QXU3SubName: Full=High-affinity choline transport protein {ECO:0000313|EMBL:ADD55051.1};
InterProD3QXU3 
PFAMD3QXU3 
ProdomD3QXU3 
UniProtKBD6HSJ5SubName: Full=Choline transporter BetT {ECO:0000313|EMBL:EFE64327.2};
InterProD6HSJ5 
PFAMD6HSJ5 
ProdomD6HSJ5 
UniProtKBD6I6C1SubName: Full=Choline transporter BetT {ECO:0000313|EMBL:EFF06594.2};
InterProD6I6C1 
PFAMD6I6C1 
ProdomD6I6C1 
UniProtKBC9QQW4SubName: Full=Choline/carnitine/betaine transporter;
InterProC9QQW4 
PFAMC9QQW4 
ProdomC9QQW4 
UniProtKBD7YHF9SubName: Full=Transporter, betaine/carnitine/choline family {ECO:0000313|EMBL:EFK03261.1};
InterProD7YHF9 
PFAMD7YHF9 
ProdomD7YHF9 
UniProtKBD7X203SubName: Full=Transporter, betaine/carnitine/choline family {ECO:0000313|EMBL:EFJ75703.1};
InterProD7X203 
PFAMD7X203 
ProdomD7X203 
UniProtKBD7ZB17SubName: Full=Transporter, betaine/carnitine/choline family {ECO:0000313|EMBL:EFJ82464.1};
InterProD7ZB17 
PFAMD7ZB17 
ProdomD7ZB17 
UniProtKBD7JJS4SubName: Full=Choline transporter BetT;
InterProD7JJS4 
PFAMD7JJS4 
ProdomD7JJS4 
UniProtKBB3A7X5SubName: Full=Transporter, betaine/carnitine/choline transporter (BCCT) family;
InterProB3A7X5 
PFAMB3A7X5 
ProdomB3A7X5 
UniProtKBA0A073VAS6SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KEL71299.1};
InterProA0A073VAS6 
PFAMA0A073VAS6 
ProdomA0A073VAS6 
UniProtKBA0A073VUI2SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KEL84100.1};
InterProA0A073VUI2 
PFAMA0A073VUI2 
ProdomA0A073VUI2 
UniProtKBA0A0H4RS37SubName: Full=Choline transport protein BetT {ECO:0000313|EMBL:AKP83029.1};
InterProA0A0H4RS37 
PFAMA0A0H4RS37 
ProdomA0A0H4RS37 
UniProtKBB2NT71SubName: Full=Transporter, betaine/carnitine/choline transporter (BCCT) family;
InterProB2NT71 
PFAMB2NT71 
ProdomB2NT71 
UniProtKBB1XET9SubName: Full=Choline transporter of high affinity;
InterProB1XET9 
PFAMB1XET9 
ProdomB1XET9 
UniProtKBA7ZWV7SubName: Full=Transporter, betaine/carnitine/choline transporter (BCCT) family;
InterProA7ZWV7 
PFAMA7ZWV7 
ProdomA7ZWV7 
UniProtKBB3I709SubName: Full=Transporter, betaine/carnitine/choline transporter (BCCT) family;
InterProB3I709 
PFAMB3I709 
ProdomB3I709 
UniProtKBB3BKV2SubName: Full=Transporter, betaine/carnitine/choline transporter (BCCT) family;
InterProB3BKV2 
PFAMB3BKV2 
ProdomB3BKV2 
UniProtKBB7L443SubName: Full=BetT protein {ECO:0000313|EMBL:CAU96193.1};
InterProB7L443 
PFAMB7L443 
ProdomB7L443 
UniProtKBB6ZQZ5SubName: Full=Transporter, betaine/carnitine/choline transporter (BCCT) family;
InterProB6ZQZ5 
PFAMB6ZQZ5 
ProdomB6ZQZ5 
UniProtKBB7N8L6SubName: Full=Choline transporter of high affinity {ECO:0000313|EMBL:CAR11567.1};
InterProB7N8L6 
PFAMB7N8L6 
ProdomB7N8L6 
UniProtKBC6ELR7SubName: Full=Choline/carnitine/betaine transporter {ECO:0000313|EMBL:ACT30344.1};
InterProC6ELR7 
PFAMC6ELR7 
ProdomC6ELR7 
UniProtKBA0A0H3PK81SubName: Full=Transporter, betaine/carnitine/choline transporter (BCCT) family {ECO:0000313|EMBL:EDU90061.1};
InterProA0A0H3PK81 
PFAMA0A0H3PK81 
ProdomA0A0H3PK81 
UniProtKBA0A0G3HK98SubName: Full=Choline transporter of high affinity protein {ECO:0000313|EMBL:AKK13726.1};
InterProA0A0G3HK98 
PFAMA0A0G3HK98 
ProdomA0A0G3HK98 
UniProtKBA0A0F6F1J1SubName: Full=High-affinity choline uptake protein BetT {ECO:0000313|EMBL:AJA24281.1};
InterProA0A0F6F1J1 
PFAMA0A0F6F1J1 
ProdomA0A0F6F1J1 
UniProtKBA0A074I9X0SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KEO03768.1};
InterProA0A074I9X0 
PFAMA0A074I9X0 
ProdomA0A074I9X0 
UniProtKBA0A074IL45SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KEO16444.1};
InterProA0A074IL45 
PFAMA0A074IL45 
ProdomA0A074IL45 
UniProtKBA0A080F495SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KEN52919.1};
InterProA0A080F495 
PFAMA0A080F495 
ProdomA0A080F495 
UniProtKBA0A080FJ56SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KEN60288.1};
InterProA0A080FJ56 
PFAMA0A080FJ56 
ProdomA0A080FJ56 
UniProtKBA0A080GWQ8SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KEN92609.1};
InterProA0A080GWQ8 
PFAMA0A080GWQ8 
ProdomA0A080GWQ8 
UniProtKBA0A080IMB3SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KEO28815.1};
InterProA0A080IMB3 
PFAMA0A080IMB3 
ProdomA0A080IMB3 
UniProtKBA0A0E0TTU9SubName: Full=Choline transport protein BetT {ECO:0000313|EMBL:AEE55010.1};
InterProA0A0E0TTU9 
PFAMA0A0E0TTU9 
ProdomA0A0E0TTU9 
UniProtKBA0A0E0Y6N8SubName: Full=Choline transport protein BetT {ECO:0000313|EMBL:AFS75851.1};
InterProA0A0E0Y6N8 
PFAMA0A0E0Y6N8 
ProdomA0A0E0Y6N8 
UniProtKBA0A0E2A183SubName: Full=Choline transport protein BetT {ECO:0000313|EMBL:EIL40836.1};
InterProA0A0E2A183 
PFAMA0A0E2A183 
ProdomA0A0E2A183 
UniProtKBA0A0E2TQN6SubName: Full=Choline transporter {ECO:0000313|EMBL:EYV09875.1};
InterProA0A0E2TQN6 
PFAMA0A0E2TQN6 
ProdomA0A0E2TQN6 
UniProtKBC6UB00SubName: Full=Choline transporter of high affinity;
InterProC6UB00 
PFAMC6UB00 
ProdomC6UB00 
UniProtKBC5W2H7SubName: Full=Choline/carnitine/betaine transporter {ECO:0000313|EMBL:ACT30344.1};
InterProC5W2H7 
PFAMC5W2H7 
ProdomC5W2H7 
UniProtKBA0A024KTW4SubName: Full=Choline transport protein BetT {ECO:0000313|EMBL:CDP68034.1};
InterProA0A024KTW4 
PFAMA0A024KTW4 
ProdomA0A024KTW4 
UniProtKBD7ZMS0SubName: Full=Transporter, betaine/carnitine/choline family {ECO:0000313|EMBL:EFK27802.1};
InterProD7ZMS0 
PFAMD7ZMS0 
ProdomD7ZMS0 
UniProtKBA0A027YST3SubName: Full=Choline transporter {ECO:0000313|EMBL:EZD89663.1};
InterProA0A027YST3 
PFAMA0A027YST3 
ProdomA0A027YST3 
UniProtKBA0A029PWL8SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:EZK26122.1};
InterProA0A029PWL8 
PFAMA0A029PWL8 
ProdomA0A029PWL8 
UniProtKBA0A070XVY6SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KDX83031.1};
InterProA0A070XVY6 
PFAMA0A070XVY6 
ProdomA0A070XVY6 
UniProtKBA0A073HPZ1SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KEJ80093.1};
InterProA0A073HPZ1 
PFAMA0A073HPZ1 
ProdomA0A073HPZ1 
UniProtKBA0A079FFC5SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KDY56283.1};
InterProA0A079FFC5 
PFAMA0A079FFC5 
ProdomA0A079FFC5 
UniProtKBA0A080JFW1SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KEO38860.1};
InterProA0A080JFW1 
PFAMA0A080JFW1 
ProdomA0A080JFW1 
UniProtKBA0A0E3KE67SubName: Full=High-affinity choline transport protein {ECO:0000313|EMBL:AKA89305.1};
InterProA0A0E3KE67 
PFAMA0A0E3KE67 
ProdomA0A0E3KE67 
UniProtKBB2PPM0SubName: Full=Transporter, betaine/carnitine/choline transporter (BCCT) family;
InterProB2PPM0 
PFAMB2PPM0 
ProdomB2PPM0 
UniProtKBB5Z1R3SubName: Full=Transporter, betaine/carnitine/choline transporter (BCCT) family;
InterProB5Z1R3 
PFAMB5Z1R3 
ProdomB5Z1R3 
UniProtKBD6IKR3SubName: Full=Choline transporter BetT;
InterProD6IKR3 
PFAMD6IKR3 
ProdomD6IKR3 
UniProtKBC8TI09SubName: Full=High affinity choline transporter BetT {ECO:0000313|EMBL:BAI23694.1};
InterProC8TI09 
PFAMC8TI09 
ProdomC8TI09 
UniProtKBB3XFA5SubName: Full=Transporter, betaine/carnitine/choline transporter (BCCT) family;
InterProB3XFA5 
PFAMB3XFA5 
ProdomB3XFA5 
UniProtKBA0A025GKP8SubName: Full=Choline transporter {ECO:0000313|EMBL:EYV64818.1};
InterProA0A025GKP8 
PFAMA0A025GKP8 
ProdomA0A025GKP8 
UniProtKBB3IJ45SubName: Full=Transporter, betaine/carnitine/choline transporter (BCCT) family;
InterProB3IJ45 
PFAMB3IJ45 
ProdomB3IJ45 
UniProtKBA0A026V0X6SubName: Full=Choline transporter {ECO:0000313|EMBL:EZA35719.1};
InterProA0A026V0X6 
PFAMA0A026V0X6 
ProdomA0A026V0X6 
UniProtKBA0A079DHE2SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KDY21336.1};
InterProA0A079DHE2 
PFAMA0A079DHE2 
ProdomA0A079DHE2 
UniProtKBB3BXC7SubName: Full=Transporter, betaine/carnitine/choline transporter (BCCT) family;
InterProB3BXC7 
PFAMB3BXC7 
ProdomB3BXC7 
UniProtKBD3GTA2SubName: Full=High-affinity choline transport protein (BCCT-family transporter) {ECO:0000313|EMBL:CBG33181.1};
InterProD3GTA2 
PFAMD3GTA2 
ProdomD3GTA2 
UniProtKBA0A027TBP7SubName: Full=Choline transporter {ECO:0000313|EMBL:EZD22675.1};
InterProA0A027TBP7 
PFAMA0A027TBP7 
ProdomA0A027TBP7 
UniProtKBA0A070UJ39SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KDX42241.1};
InterProA0A070UJ39 
PFAMA0A070UJ39 
ProdomA0A070UJ39 
UniProtKBA0A079EKS5SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KDY45666.1};
InterProA0A079EKS5 
PFAMA0A079EKS5 
ProdomA0A079EKS5 
UniProtKBA0A0E2UJR2SubName: Full=Choline transporter {ECO:0000313|EMBL:EZE24457.1};
InterProA0A0E2UJR2 
PFAMA0A0E2UJR2 
ProdomA0A0E2UJR2 
UniProtKBB6I094SubName: Full=Choline transport protein {ECO:0000313|EMBL:BAG75859.1};
InterProB6I094 
PFAMB6I094 
ProdomB6I094 
UniProtKBC8U204SubName: Full=High affinity choline transporter BetT {ECO:0000313|EMBL:BAI29162.1};
InterProC8U204 
PFAMC8U204 
ProdomC8U204 
UniProtKBA0A079H1B4SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KDY96297.1};
InterProA0A079H1B4 
PFAMA0A079H1B4 
ProdomA0A079H1B4 
UniProtKBA0A080G699SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KEN74480.1};
InterProA0A080G699 
PFAMA0A080G699 
ProdomA0A080G699 
UniProtKBA0A0A8UEB6SubName: Full=High-affinity choline transporter (BCCT family) {ECO:0000313|EMBL:CEK07110.1};
InterProA0A0A8UEB6 
PFAMA0A0A8UEB6 
ProdomA0A0A8UEB6 
UniProtKBA0A0E1LVN6SubName: Full=Choline transporter of high affinity {ECO:0000313|EMBL:AJF55088.1};
InterProA0A0E1LVN6 
PFAMA0A0E1LVN6 
ProdomA0A0E1LVN6 
UniProtKBA0A0F6BZJ2SubName: Full=Choline transport protein BetT {ECO:0000313|EMBL:AFJ27398.1};
InterProA0A0F6BZJ2 
PFAMA0A0F6BZJ2 
ProdomA0A0F6BZJ2 
UniProtKBA0A0G3K5D9SubName: Full=Choline transporter of high affinity {ECO:0000313|EMBL:AKK46941.1};
InterProA0A0G3K5D9 
PFAMA0A0G3K5D9 
ProdomA0A0G3K5D9 
UniProtKBB2P5H0SubName: Full=Transporter, betaine/carnitine/choline transporter (BCCT) family;
InterProB2P5H0 
PFAMB2P5H0 
ProdomB2P5H0 
UniProtKBB1J0W3SubName: Full=Choline/carnitine/betaine transporter;
InterProB1J0W3 
PFAMB1J0W3 
ProdomB1J0W3 
UniProtKBB3WL40SubName: Full=Transporter, betaine/carnitine/choline transporter (BCCT) family;
InterProB3WL40 
PFAMB3WL40 
ProdomB3WL40 
UniProtKBB7M2V8SubName: Full=Choline transporter of high affinity;
InterProB7M2V8 
PFAMB7M2V8 
ProdomB7M2V8 
UniProtKBA0A074I5F3SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KEO02133.1};
InterProA0A074I5F3 
PFAMA0A074I5F3 
ProdomA0A074I5F3 
UniProtKBA0A073TAV0SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KEL23831.1};
InterProA0A073TAV0 
PFAMA0A073TAV0 
ProdomA0A073TAV0 
UniProtKBA0A073G2T1SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KEJ51894.1};
InterProA0A073G2T1 
PFAMA0A073G2T1 
ProdomA0A073G2T1 
UniProtKBB3AQN1SubName: Full=Transporter, betaine/carnitine/choline transporter (BCCT) family;
InterProB3AQN1 
PFAMB3AQN1 
ProdomB3AQN1 
UniProtKBD6J6P0SubName: Full=Choline transporter BetT {ECO:0000313|EMBL:EFF14120.2};
InterProD6J6P0 
PFAMD6J6P0 
ProdomD6J6P0 
UniProtKBD7XKM0SubName: Full=Transporter, betaine/carnitine/choline family {ECO:0000313|EMBL:EFJ88106.1};
InterProD7XKM0 
PFAMD7XKM0 
ProdomD7XKM0 
UniProtKBC8UIA5SubName: Full=High affinity choline transporter BetT {ECO:0000313|EMBL:BAI34333.1};
InterProC8UIA5 
PFAMC8UIA5 
ProdomC8UIA5 
UniProtKBA0A028ALP2SubName: Full=Choline transporter {ECO:0000313|EMBL:EZE11749.1};
InterProA0A028ALP2 
PFAMA0A028ALP2 
ProdomA0A028ALP2 
UniProtKBA0A029L2I2SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:EZJ79680.1};
InterProA0A029L2I2 
PFAMA0A029L2I2 
ProdomA0A029L2I2 
UniProtKBA0A069X5D5SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KDU24336.1};
InterProA0A069X5D5 
PFAMA0A069X5D5 
ProdomA0A069X5D5 
UniProtKBA0A070D6T7SubName: Full=Choline transporter {ECO:0000313|EMBL:KDV36162.1};
InterProA0A070D6T7 
PFAMA0A070D6T7 
ProdomA0A070D6T7 
UniProtKBA0A071AAZ9SubName: Full=Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KDY55814.1};
InterProA0A071AAZ9 
PFAMA0A071AAZ9 
ProdomA0A071AAZ9 
UniProtKBB3B2N2SubName: Full=Transporter, betaine/carnitine/choline transporter (BCCT) family;
InterProB3B2N2 
PFAMB3B2N2 
ProdomB3B2N2