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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A2UDJ8
Original Database ID ref NP_416820.1
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation putative membrane protein.
Sequence Length 219

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region143-182
Protein Length219
Template PDB Code1k0wA
Template Region88-127
Sequence Identity35%
E-Value0.69
GA3410.14
MPQS0.196548
z-DOPE3.43
TSVMod MethodMSALL
TSVMod RMSD9.757
TSVMod NO350.086
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Sequence Model Coverage Summary
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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1k0wcrystal structure of l-ribulose-5-phosphate 4-epimerase ; EC: 5.1.3.4 ; PFAM: PF00596 ; SCOP: 77220
DBALI1k0wA 
JenaImageLibrary1k0w 
Target Sequence
UniProtKBE7T2J3SubName: Full=DedA protein {ECO:0000313|EMBL:EFW53671.1};
InterProE7T2J3 
PFAME7T2J3 
ProdomE7T2J3 
UniProtKBA0A062Y2X8SubName: Full=Protein dedA {ECO:0000313|EMBL:KDA57378.1};
InterProA0A062Y2X8 
PFAMA0A062Y2X8 
ProdomA0A062Y2X8 
UniProtKBA0A069XSJ0SubName: Full=Protein dedA {ECO:0000313|EMBL:KDU32929.1};
InterProA0A069XSJ0 
PFAMA0A069XSJ0 
ProdomA0A069XSJ0 
UniProtKBA0A070FFY5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDV64378.1};
InterProA0A070FFY5 
PFAMA0A070FFY5 
ProdomA0A070FFY5 
UniProtKBA0A070KTA5SubName: Full=Protein dedA {ECO:0000313|EMBL:KDW31668.1};
InterProA0A070KTA5 
PFAMA0A070KTA5 
ProdomA0A070KTA5 
UniProtKBA0A070TA80SubName: Full=Protein dedA {ECO:0000313|EMBL:KDX26846.1};
InterProA0A070TA80 
PFAMA0A070TA80 
ProdomA0A070TA80 
UniProtKBA0A070V801SubName: Full=Protein dedA {ECO:0000313|EMBL:KDX46478.1};
InterProA0A070V801 
PFAMA0A070V801 
ProdomA0A070V801 
UniProtKBA0A071CDZ8SubName: Full=Protein dedA {ECO:0000313|EMBL:KDZ17041.1};
InterProA0A071CDZ8 
PFAMA0A071CDZ8 
ProdomA0A071CDZ8 
UniProtKBA0A071DL53SubName: Full=Protein dedA {ECO:0000313|EMBL:KDZ41843.1};
InterProA0A071DL53 
PFAMA0A071DL53 
ProdomA0A071DL53 
UniProtKBA0A073U1A7SubName: Full=Protein dedA {ECO:0000313|EMBL:KEL29030.1};
InterProA0A073U1A7 
PFAMA0A073U1A7 
ProdomA0A073U1A7 
UniProtKBA0A074HRJ2SubName: Full=Protein dedA {ECO:0000313|EMBL:KEN96971.1};
InterProA0A074HRJ2 
PFAMA0A074HRJ2 
ProdomA0A074HRJ2 
UniProtKBA0A029MAX6SubName: Full=Protein dedA {ECO:0000313|EMBL:EZJ94417.1};
InterProA0A029MAX6 
PFAMA0A029MAX6 
ProdomA0A029MAX6 
UniProtKBA0A029LHC8SubName: Full=Protein dedA {ECO:0000313|EMBL:EZJ84888.1};
InterProA0A029LHC8 
PFAMA0A029LHC8 
ProdomA0A029LHC8 
UniProtKBA8A2I6SubName: Full=Membrane protein, DedA family;
InterProA8A2I6 
PFAMA8A2I6 
ProdomA8A2I6 
UniProtKBE2KP91SubName: Full=Membrane protein, DedA family;
InterProE2KP91 
PFAME2KP91 
ProdomE2KP91 
UniProtKBE8INW3SubName: Full=Uncharacterized protein;
InterProE8INW3 
PFAME8INW3 
ProdomE8INW3 
UniProtKBE8J427SubName: Full=Putative uncharacterized protein;
InterProE8J427 
PFAME8J427 
ProdomE8J427 
UniProtKBE9WH18SubName: Full=Putative uncharacterized protein;
InterProE9WH18 
PFAME9WH18 
ProdomE9WH18 
UniProtKBE8HXC2SubName: Full=Uncharacterized protein;
InterProE8HXC2 
PFAME8HXC2 
ProdomE8HXC2 
UniProtKBF1YAR6SubName: Full=DedA protein;
InterProF1YAR6 
PFAMF1YAR6 
ProdomF1YAR6 
UniProtKBE9YQI0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EGB63170.1};
InterProE9YQI0 
PFAME9YQI0 
ProdomE9YQI0 
UniProtKBF1ZJW4SubName: Full=Protein dedA {ECO:0000313|EMBL:EGE64247.1};
InterProF1ZJW4 
PFAMF1ZJW4 
ProdomF1ZJW4 
UniProtKBE9YB86SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EGB68292.1};
InterProE9YB86 
PFAME9YB86 
ProdomE9YB86 
UniProtKBC5W754SubName: Full=SNARE associated Golgi protein {ECO:0000313|EMBL:ACT28405.1};
InterProC5W754 
PFAMC5W754 
ProdomC5W754 
UniProtKBA0A079FAT2SubName: Full=Protein dedA {ECO:0000313|EMBL:KDY53866.1};
InterProA0A079FAT2 
PFAMA0A079FAT2 
ProdomA0A079FAT2 
UniProtKBA0A079G4J9SubName: Full=Protein dedA {ECO:0000313|EMBL:KDY67444.1};
InterProA0A079G4J9 
PFAMA0A079G4J9 
ProdomA0A079G4J9 
UniProtKBC3T1X7SubName: Full=Protein DedA {ECO:0000313|EMBL:KGM70360.1};SubName: Full=Protein dedA {ECO:0000313|EMBL:CEE03504.1};SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AJB52444.1};
InterProC3T1X7 
PFAMC3T1X7 
ProdomC3T1X7 
UniProtKBB3BU88SubName: Full=Membrane protein, DedA family;
InterProB3BU88 
PFAMB3BU88 
ProdomB3BU88 
UniProtKBB2N4W0SubName: Full=Membrane protein, DedA family;
InterProB2N4W0 
PFAMB2N4W0 
ProdomB2N4W0 
UniProtKBB1IXM5SubName: Full=SNARE associated Golgi protein;
InterProB1IXM5 
PFAMB1IXM5 
ProdomB1IXM5 
UniProtKBD3QL10SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ADD57392.1};
InterProD3QL10 
PFAMD3QL10 
ProdomD3QL10 
UniProtKBC6UNU8SubName: Full=Conserved inner membrane protein;
InterProC6UNU8 
PFAMC6UNU8 
ProdomC6UNU8 
UniProtKBE1HSL4SubName: Full=SNARE-like domain protein {ECO:0000313|EMBL:EFK89076.1};
InterProE1HSL4 
PFAME1HSL4 
ProdomE1HSL4 
UniProtKBD8EPQ9SubName: Full=SNARE-like domain protein {ECO:0000313|EMBL:EFK50285.1};
InterProD8EPQ9 
PFAMD8EPQ9 
ProdomD8EPQ9 
UniProtKBE2K991SubName: Full=Membrane protein, DedA family;
InterProE2K991 
PFAME2K991 
ProdomE2K991 
UniProtKBE3PE22SubName: Full=Putative membrane protein {ECO:0000313|EMBL:CBJ01958.1};
InterProE3PE22 
PFAME3PE22 
ProdomE3PE22 
UniProtKBB3X0Q2SubName: Full=Membrane protein, DedA family {ECO:0000313|EMBL:EDX34907.1};
InterProB3X0Q2 
PFAMB3X0Q2 
ProdomB3X0Q2 
UniProtKBB3X9R4SubName: Full=Membrane protein, DedA family;
InterProB3X9R4 
PFAMB3X9R4 
ProdomB3X9R4 
UniProtKBB2NMG2SubName: Full=Membrane protein, DedA family;
InterProB2NMG2 
PFAMB2NMG2 
ProdomB2NMG2 
UniProtKBA0A080EHL5SubName: Full=Protein dedA {ECO:0000313|EMBL:KEN48269.1};
InterProA0A080EHL5 
PFAMA0A080EHL5 
ProdomA0A080EHL5 
UniProtKBA0A080FCL4SubName: Full=Protein dedA {ECO:0000313|EMBL:KEN56031.1};
InterProA0A080FCL4 
PFAMA0A080FCL4 
ProdomA0A080FCL4 
UniProtKBA0A0E0U0P6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEE57433.1};
InterProA0A0E0U0P6 
PFAMA0A0E0U0P6 
ProdomA0A0E0U0P6 
UniProtKBA0A0E1M457SubName: Full=DedA family inner membrane protein {ECO:0000313|EMBL:AJF57204.1};
InterProA0A0E1M457 
PFAMA0A0E1M457 
ProdomA0A0E1M457 
UniProtKBA0A0E3MWM5SubName: Full=Protein DedA {ECO:0000313|EMBL:AKA91394.1};
InterProA0A0E3MWM5 
PFAMA0A0E3MWM5 
ProdomA0A0E3MWM5 
UniProtKBA0A0F6C718SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFJ30024.1};
InterProA0A0F6C718 
PFAMA0A0F6C718 
ProdomA0A0F6C718 
UniProtKBA0A0H3PXQ0SubName: Full=Membrane protein, DedA family {ECO:0000313|EMBL:EDU91284.1};
InterProA0A0H3PXQ0 
PFAMA0A0H3PXQ0 
ProdomA0A0H3PXQ0 
UniProtKBA0A0H3X7S2SubName: Full=Inner membrane protein {ECO:0000313|EMBL:AKM35895.1};
InterProA0A0H3X7S2 
PFAMA0A0H3X7S2 
ProdomA0A0H3X7S2 
UniProtKBB3A5U8SubName: Full=Membrane protein, DedA family;
InterProB3A5U8 
PFAMB3A5U8 
ProdomB3A5U8 
UniProtKBB2P318SubName: Full=Membrane protein, DedA family;
InterProB2P318 
PFAMB2P318 
ProdomB2P318 
UniProtKBE6BA00SubName: Full=Protein dedA {ECO:0000313|EMBL:EFU96218.1};
InterProE6BA00 
PFAME6BA00 
ProdomE6BA00 
UniProtKBE2X033SubName: Full=Protein dedA;
InterProE2X033 
PFAME2X033 
ProdomE2X033 
UniProtKBA0A017IFE3SubName: Full=Protein dedA {ECO:0000313|EMBL:EYD85093.1};
InterProA0A017IFE3 
PFAMA0A017IFE3 
ProdomA0A017IFE3 
UniProtKBF3V7N0SubName: Full=Protein dedA {ECO:0000313|EMBL:EGI95183.1};
InterProF3V7N0 
PFAMF3V7N0 
ProdomF3V7N0 
UniProtKBA0A027YIM0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZD86393.1};
InterProA0A027YIM0 
PFAMA0A027YIM0 
ProdomA0A027YIM0 
UniProtKBA0A069Z2C4SubName: Full=Protein dedA {ECO:0000313|EMBL:KDU53752.1};
InterProA0A069Z2C4 
PFAMA0A069Z2C4 
ProdomA0A069Z2C4 
UniProtKBA0A071AJX1SubName: Full=Protein dedA {ECO:0000313|EMBL:KDY61332.1};
InterProA0A071AJX1 
PFAMA0A071AJX1 
ProdomA0A071AJX1 
UniProtKBA0A074J201SubName: Full=Protein dedA {ECO:0000313|EMBL:KEO10015.1};
InterProA0A074J201 
PFAMA0A074J201 
ProdomA0A074J201 
UniProtKBA0A080IXG7SubName: Full=Protein dedA {ECO:0000313|EMBL:KEO32240.1};
InterProA0A080IXG7 
PFAMA0A080IXG7 
ProdomA0A080IXG7 
UniProtKBA0A0F6F9U9SubName: Full=DedA protein {ECO:0000313|EMBL:AJA27189.1};
InterProA0A0F6F9U9 
PFAMA0A0F6F9U9 
ProdomA0A0F6F9U9 
UniProtKBB3BHE2SubName: Full=Membrane protein, DedA family;
InterProB3BHE2 
PFAMB3BHE2 
ProdomB3BHE2 
UniProtKBC4ZVL0SubName: Full=Conserved inner membrane protein;
InterProC4ZVL0 
PFAMC4ZVL0 
ProdomC4ZVL0 
UniProtKBD8B2Y4SubName: Full=SNARE-like domain protein {ECO:0000313|EMBL:EFJ66548.1};
InterProD8B2Y4 
PFAMD8B2Y4 
ProdomD8B2Y4 
UniProtKBE9WVY1SubName: Full=Putative uncharacterized protein;
InterProE9WVY1 
PFAME9WVY1 
ProdomE9WVY1 
UniProtKBE7TMS1SubName: Full=DedA protein;
InterProE7TMS1 
PFAME7TMS1 
ProdomE7TMS1 
UniProtKBD8AMP8SubName: Full=SNARE-like domain protein {ECO:0000313|EMBL:EFK15564.1};
InterProD8AMP8 
PFAMD8AMP8 
ProdomD8AMP8 
UniProtKBA0A023Z017SubName: Full=DedA protein {ECO:0000313|EMBL:AHY71572.1};
InterProA0A023Z017 
PFAMA0A023Z017 
ProdomA0A023Z017 
UniProtKBD6I9Q7SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EFF06237.2};
InterProD6I9Q7 
PFAMD6I9Q7 
ProdomD6I9Q7 
UniProtKBA0A024KYW5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CDP69808.1};
InterProA0A024KYW5 
PFAMA0A024KYW5 
ProdomA0A024KYW5 
UniProtKBA0A080GMW3SubName: Full=Protein dedA {ECO:0000313|EMBL:KEN89699.1};
InterProA0A080GMW3 
PFAMA0A080GMW3 
ProdomA0A080GMW3 
UniProtKBC9QQL7SubName: Full=SNARE associated Golgi protein-like protein;SubName: Full=Uncharacterized protein;
InterProC9QQL7 
PFAMC9QQL7 
ProdomC9QQL7 
UniProtKBE8IAQ7SubName: Full=Uncharacterized protein;
InterProE8IAQ7 
PFAME8IAQ7 
ProdomE8IAQ7 
UniProtKBA0A025CK63SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EYV14005.1};
InterProA0A025CK63 
PFAMA0A025CK63 
ProdomA0A025CK63 
UniProtKBA0A070YFD4SubName: Full=Protein dedA {ECO:0000313|EMBL:KDX85653.1};
InterProA0A070YFD4 
PFAMA0A070YFD4 
ProdomA0A070YFD4 
UniProtKBA0A080I9E7SubName: Full=Protein dedA {ECO:0000313|EMBL:KEO23448.1};
InterProA0A080I9E7 
PFAMA0A080I9E7 
ProdomA0A080I9E7 
UniProtKBB3B0U4SubName: Full=Membrane protein, DedA family;
InterProB3B0U4 
PFAMB3B0U4 
ProdomB3B0U4 
UniProtKBD8BWH0SubName: Full=SNARE-like domain protein {ECO:0000313|EMBL:EFI89010.1};
InterProD8BWH0 
PFAMD8BWH0 
ProdomD8BWH0 
UniProtKBE8H4H2SubName: Full=Uncharacterized protein;
InterProE8H4H2 
PFAME8H4H2 
ProdomE8H4H2 
UniProtKBA0A0A0FBG9SubName: Full=Protein DedA {ECO:0000313|EMBL:KGM60466.1};
InterProA0A0A0FBG9 
PFAMA0A0A0FBG9 
ProdomA0A0A0FBG9 
UniProtKBA0A0E1T1M6SubName: Full=Membrane protein, DedA family {ECO:0000313|EMBL:EDU65688.1};
InterProA0A0E1T1M6 
PFAMA0A0E1T1M6 
ProdomA0A0E1T1M6 
UniProtKBA0A0G3HSF8SubName: Full=Conserved inner membrane protein {ECO:0000313|EMBL:AKK15675.1};
InterProA0A0G3HSF8 
PFAMA0A0G3HSF8 
ProdomA0A0G3HSF8 
UniProtKBB2PIL5SubName: Full=Membrane protein, DedA family;
InterProB2PIL5 
PFAMB2PIL5 
ProdomB2PIL5 
UniProtKBB3ALA9SubName: Full=Membrane protein, DedA family;
InterProB3ALA9 
PFAMB3ALA9 
ProdomB3ALA9 
UniProtKBB5YXV7SubName: Full=Membrane protein, DedA family;
InterProB5YXV7 
PFAMB5YXV7 
ProdomB5YXV7 
UniProtKBB6ZXM9SubName: Full=Membrane protein, DedA family;
InterProB6ZXM9 
PFAMB6ZXM9 
ProdomB6ZXM9 
UniProtKBB1X928SubName: Full=Conserved inner membrane protein;
InterProB1X928 
PFAMB1X928 
ProdomB1X928 
UniProtKBD7ZQ27SubName: Full=SNARE-like domain protein {ECO:0000313|EMBL:EFK26976.1};
InterProD7ZQ27 
PFAMD7ZQ27 
ProdomD7ZQ27 
UniProtKBE2JVY0SubName: Full=Membrane protein, DedA family;
InterProE2JVY0 
PFAME2JVY0 
ProdomE2JVY0 
UniProtKBA0A079H258SubName: Full=Protein dedA {ECO:0000313|EMBL:KDY96592.1};
InterProA0A079H258 
PFAMA0A079H258 
ProdomA0A079H258 
UniProtKBA0A079DQK1SubName: Full=Protein dedA {ECO:0000313|EMBL:KDY24408.1};
InterProA0A079DQK1 
PFAMA0A079DQK1 
ProdomA0A079DQK1 
UniProtKBA0A073GRW2SubName: Full=Protein dedA {ECO:0000313|EMBL:KEJ67884.1};
InterProA0A073GRW2 
PFAMA0A073GRW2 
ProdomA0A073GRW2 
UniProtKBC6ELD6SubName: Full=SNARE associated Golgi protein {ECO:0000313|EMBL:ACT28405.1};
InterProC6ELD6 
PFAMC6ELD6 
ProdomC6ELD6 
UniProtKBE9Y1D5SubName: Full=Putative uncharacterized protein;
InterProE9Y1D5 
PFAME9Y1D5 
ProdomE9Y1D5 
UniProtKBF1XP81SubName: Full=DedA protein;
InterProF1XP81 
PFAMF1XP81 
ProdomF1XP81 
UniProtKBE8HIA5SubName: Full=Uncharacterized protein;
InterProE8HIA5 
PFAME8HIA5 
ProdomE8HIA5 
UniProtKBA0A029KMK2SubName: Full=Protein dedA {ECO:0000313|EMBL:EZJ73962.1};
InterProA0A029KMK2 
PFAMA0A029KMK2 
ProdomA0A029KMK2 
UniProtKBA0A029PHG9SubName: Full=Protein dedA {ECO:0000313|EMBL:EZK21789.1};
InterProA0A029PHG9 
PFAMA0A029PHG9 
ProdomA0A029PHG9 
UniProtKBA0A070CWD2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDV30289.1};
InterProA0A070CWD2 
PFAMA0A070CWD2 
ProdomA0A070CWD2 
UniProtKBA0A070SUB9SubName: Full=Protein dedA {ECO:0000313|EMBL:KDX21010.1};
InterProA0A070SUB9 
PFAMA0A070SUB9 
ProdomA0A070SUB9 
UniProtKBA0A071BWP3SubName: Full=Protein dedA {ECO:0000313|EMBL:KDY87854.1};
InterProA0A071BWP3 
PFAMA0A071BWP3 
ProdomA0A071BWP3 
UniProtKBC6UMJ2SubName: Full=Conserved inner membrane protein;
InterProC6UMJ2 
PFAMC6UMJ2 
ProdomC6UMJ2