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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P0ACG6.1
Original Database ID ref NP_416080.1
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation hokd_ecoli recname: full=protein
hokd; altname: full=protein relf
Sequence Length 51

Dataset Information:

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Model Information

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Target Region3-43
Protein Length51
Template PDB Code2hz5A
Template Region40-80
Sequence Identity27%
E-Value0
GA3410.07
MPQS1.00992
z-DOPE0.52
TSVMod MethodMSALL
TSVMod RMSD8.158
TSVMod NO350.121
Datasete_coli_83333_B1
ModPipe VersionSVN.r1372
Model Date2011-08-28

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2hz5crystal structure of human dynein light chain dnlc2a
DBALI2hz5A 
JenaImageLibrary2hz5 
Target Sequence
UniProtKBL3VCM1SubName: Full=Protein hokD;
InterProL3VCM1 
PFAML3VCM1 
ProdomL3VCM1 
UniProtKBA0A0H9MP34SubName: Full=RelF {ECO:0000313|EMBL:CSL03823.1};
InterProA0A0H9MP34 
PFAMA0A0H9MP34 
ProdomA0A0H9MP34 
UniProtKBA0A0J3Y4L5SubName: Full=Protein HokD {ECO:0000313|EMBL:KME61065.1};
InterProA0A0J3Y4L5 
PFAMA0A0J3Y4L5 
ProdomA0A0J3Y4L5 
UniProtKBD3GYG6SubName: Full=Putative host cell-killing modulation protein {ECO:0000313|EMBL:CBG34157.1};SubName: Full=Putative prophage protein {ECO:0000313|EMBL:CBG35012.1};
InterProD3GYG6 
PFAMD3GYG6 
ProdomD3GYG6 
UniProtKBD2AFN8SubName: Full=Putative cell killing protein {ECO:0000313|EMBL:ADA73941.1};
InterProD2AFN8 
PFAMD2AFN8 
ProdomD2AFN8 
UniProtKBE1HZ71SubName: Full=Hok/gef family protein {ECO:0000313|EMBL:EFK74610.1};
InterProE1HZ71 
PFAME1HZ71 
ProdomE1HZ71 
UniProtKBE0IX02SubName: Full=Putative prophage maintenance protein {ECO:0000313|EMBL:AFH11349.1};SubName: Full=Qin prophage small toxic polypeptide {ECO:0000313|EMBL:ADT75189.1};
InterProE0IX02 
PFAME0IX02 
ProdomE0IX02 
UniProtKBD7YUE0SubName: Full=Hok/gef family protein;
InterProD7YUE0 
PFAMD7YUE0 
ProdomD7YUE0 
UniProtKBE8IMN8SubName: Full=Putative prophage maintenance protein;
InterProE8IMN8 
PFAME8IMN8 
ProdomE8IMN8 
UniProtKBE8I9N6SubName: Full=Putative prophage maintenance protein;
InterProE8I9N6 
PFAME8I9N6 
ProdomE8I9N6 
UniProtKBE9X3L1SubName: Full=Hok/gef family protein;
InterProE9X3L1 
PFAME9X3L1 
ProdomE9X3L1 
UniProtKBA0A0G3KLF9SubName: Full=Protein hokC {ECO:0000313|EMBL:AKK54108.1};
InterProA0A0G3KLF9 
PFAMA0A0G3KLF9 
ProdomA0A0G3KLF9 
UniProtKBA0A0G3I0J3SubName: Full=Qin prophage small toxic polypeptide protein {ECO:0000313|EMBL:AKK17663.1};
InterProA0A0G3I0J3 
PFAMA0A0G3I0J3 
ProdomA0A0G3I0J3 
UniProtKBC8TRV1SubName: Full=Prophage maintenance protein {ECO:0000313|EMBL:BAI25451.1};SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAI25515.1};
InterProC8TRV1 
PFAMC8TRV1 
ProdomC8TRV1 
UniProtKBL3SHU0SubName: Full=Protein hokD;
InterProL3SHU0 
PFAML3SHU0 
ProdomL3SHU0 
UniProtKBL3WX39SubName: Full=Protein hokD;
InterProL3WX39 
PFAML3WX39 
ProdomL3WX39 
UniProtKBL3XH45SubName: Full=Protein hokD;
InterProL3XH45 
PFAML3XH45 
ProdomL3XH45 
UniProtKBL3ZWL7SubName: Full=Protein hokD;
InterProL3ZWL7 
PFAML3ZWL7 
ProdomL3ZWL7 
UniProtKBB1XF30SubName: Full=Qin prophage; small toxic polypeptide;
InterProB1XF30 
PFAMB1XF30 
ProdomB1XF30 
UniProtKBC4ZWX9SubName: Full=Qin prophage; small toxic polypeptide;
InterProC4ZWX9 
PFAMC4ZWX9 
ProdomC4ZWX9 
UniProtKBL4DGK8SubName: Full=Protein hokD;
InterProL4DGK8 
PFAML4DGK8 
ProdomL4DGK8 
UniProtKBC6UHX6SubName: Full=Small toxic polypeptide;
InterProC6UHX6 
PFAMC6UHX6 
ProdomC6UHX6 
UniProtKBL4CET3SubName: Full=Protein hokD;
InterProL4CET3 
PFAML4CET3 
ProdomL4CET3 
UniProtKBL3WAZ4SubName: Full=Protein hokD;
InterProL3WAZ4 
PFAML3WAZ4 
ProdomL3WAZ4 
UniProtKBE8HUX4SubName: Full=Putative prophage maintenance protein;
InterProE8HUX4 
PFAME8HUX4 
ProdomE8HUX4 
UniProtKBD7JMD7SubName: Full=HokD;
InterProD7JMD7 
PFAMD7JMD7 
ProdomD7JMD7 
UniProtKBL3BIC7SubName: Full=Protein hokD {ECO:0000313|EMBL:ELC88508.1};
InterProL3BIC7 
PFAML3BIC7 
ProdomL3BIC7 
UniProtKBL2V369SubName: Full=Protein hokD {ECO:0000313|EMBL:ELC08917.1};
InterProL2V369 
PFAML2V369 
ProdomL2V369 
UniProtKBI4SH50SubName: Full=Putative prophage maintenance protein;
InterProI4SH50 
PFAMI4SH50 
ProdomI4SH50 
UniProtKBC8UQ01SubName: Full=Putative cell killing protein HokC {ECO:0000313|EMBL:BAI35851.1};
InterProC8UQ01 
PFAMC8UQ01 
ProdomC8UQ01 
UniProtKBL3HRX0SubName: Full=Protein hokD;
InterProL3HRX0 
PFAML3HRX0 
ProdomL3HRX0 
UniProtKBL3EXX0SubName: Full=Protein hokD;
InterProL3EXX0 
PFAML3EXX0 
ProdomL3EXX0 
UniProtKBL3QQJ8SubName: Full=Protein hokD {ECO:0000313|EMBL:ELE61742.1};
InterProL3QQJ8 
PFAML3QQJ8 
ProdomL3QQJ8 
UniProtKBL3LII2SubName: Full=Protein hokD;
InterProL3LII2 
PFAML3LII2 
ProdomL3LII2 
UniProtKBL3RKP9SubName: Full=Protein hokD;
InterProL3RKP9 
PFAML3RKP9 
ProdomL3RKP9 
UniProtKBL3TZY0SubName: Full=Protein hokD;
InterProL3TZY0 
PFAML3TZY0 
ProdomL3TZY0 
UniProtKBL2XLL7SubName: Full=Protein hokD {ECO:0000313|EMBL:ELC40703.1};
InterProL2XLL7 
PFAML2XLL7 
ProdomL2XLL7 
UniProtKBL2YA09SubName: Full=Protein hokD;
InterProL2YA09 
PFAML2YA09 
ProdomL2YA09 
UniProtKBK0BLF2SubName: Full=Prophage maintenance protein;
InterProK0BLF2 
PFAMK0BLF2 
ProdomK0BLF2 
UniProtKBF9R637SubName: Full=Putative prophage maintenance protein;
InterProF9R637 
PFAMF9R637 
ProdomF9R637 
UniProtKBG2F9Y7SubName: Full=Putative prophage maintenance protein;
InterProG2F9Y7 
PFAMG2F9Y7 
ProdomG2F9Y7 
UniProtKBF4TG93SubName: Full=Conserved domain protein {ECO:0000313|EMBL:EGI21111.1};
InterProF4TG93 
PFAMF4TG93 
ProdomF4TG93 
UniProtKBI2P992SubName: Full=Protein hokD;
InterProI2P992 
PFAMI2P992 
ProdomI2P992 
UniProtKBI2I8F3SubName: Full=Prophage maintenance protein;
InterProI2I8F3 
PFAMI2I8F3 
ProdomI2I8F3 
UniProtKBI4RLQ3SubName: Full=Prophage maintenance protein;
InterProI4RLQ3 
PFAMI4RLQ3 
ProdomI4RLQ3 
UniProtKBH9YJ45SubName: Full=Putative prophage maintenance protein;
InterProH9YJ45 
PFAMH9YJ45 
ProdomH9YJ45 
UniProtKBF4SJ86SubName: Full=Conserved domain protein {ECO:0000313|EMBL:EGI11168.1};
InterProF4SJ86 
PFAMF4SJ86 
ProdomF4SJ86 
UniProtKBK4WE92SubName: Full=Prophage maintenance protein;
InterProK4WE92 
PFAMK4WE92 
ProdomK4WE92 
UniProtKBK4VU22SubName: Full=Prophage maintenance protein;
InterProK4VU22 
PFAMK4VU22 
ProdomK4VU22 
UniProtKBL3UL15SubName: Full=Protein hokD;
InterProL3UL15 
PFAML3UL15 
ProdomL3UL15 
UniProtKBL3TSS3SubName: Full=Protein hokD;
InterProL3TSS3 
PFAML3TSS3 
ProdomL3TSS3 
UniProtKBA0A064TK91SubName: Full=Protein hokD {ECO:0000313|EMBL:KDG96966.1};
InterProA0A064TK91 
PFAMA0A064TK91 
ProdomA0A064TK91 
UniProtKBC5W4Z7SubName: Full=Qin prophage small toxic polypeptide;SubName: Full=Small toxic polypeptide;
InterProC5W4Z7 
PFAMC5W4Z7 
ProdomC5W4Z7 
UniProtKBA0A0E1LX89SubName: Full=Small toxic polypeptide {ECO:0000313|EMBL:AJF56411.1};
InterProA0A0E1LX89 
PFAMA0A0E1LX89 
ProdomA0A0E1LX89 
UniProtKBD6IMK6SubName: Full=Regulatory protein mokC;
InterProD6IMK6 
PFAMD6IMK6 
ProdomD6IMK6 
UniProtKBE8HT26SubName: Full=Putative prophage maintenance protein;
InterProE8HT26 
PFAME8HT26 
ProdomE8HT26 
UniProtKBE9XLN0SubName: Full=Hok/gef family protein {ECO:0000313|EMBL:EGB72086.1};
InterProE9XLN0 
PFAME9XLN0 
ProdomE9XLN0 
UniProtKBH6MBN5SubName: Full=Prophage maintenance protein;
InterProH6MBN5 
PFAMH6MBN5 
ProdomH6MBN5 
UniProtKBI4S488SubName: Full=Putative prophage maintenance protein;
InterProI4S488 
PFAMI4S488 
ProdomI4S488 
UniProtKBK4X2J5SubName: Full=Prophage maintenance protein;
InterProK4X2J5 
PFAMK4X2J5 
ProdomK4X2J5 
UniProtKBL3D2R6SubName: Full=Protein hokD;
InterProL3D2R6 
PFAML3D2R6 
ProdomL3D2R6 
UniProtKBL3KGJ3SubName: Full=Protein hokD;
InterProL3KGJ3 
PFAML3KGJ3 
ProdomL3KGJ3 
UniProtKBL4C076SubName: Full=Protein hokD;
InterProL4C076 
PFAML4C076 
ProdomL4C076 
UniProtKBL3VHG2SubName: Full=Protein hokD;
InterProL3VHG2 
PFAML3VHG2 
ProdomL3VHG2 
UniProtKBL3JTM1SubName: Full=Protein hokD;
InterProL3JTM1 
PFAML3JTM1 
ProdomL3JTM1 
UniProtKBA0A094P2M0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CDX06887.1};
InterProA0A094P2M0 
PFAMA0A094P2M0 
ProdomA0A094P2M0 
UniProtKBL3J1B6SubName: Full=Protein hokD;
InterProL3J1B6 
PFAML3J1B6 
ProdomL3J1B6 
UniProtKBA0A0C7N2Z8SubName: Full=RelF {ECO:0000313|EMBL:CEP59861.1};
InterProA0A0C7N2Z8 
PFAMA0A0C7N2Z8 
ProdomA0A0C7N2Z8 
UniProtKBF8YE65SubName: Full=Putative prophage maintenance protein;
InterProF8YE65 
PFAMF8YE65 
ProdomF8YE65 
UniProtKBL3FWX8SubName: Full=Protein hokD;
InterProL3FWX8 
PFAML3FWX8 
ProdomL3FWX8 
UniProtKBC8U736SubName: Full=Small toxic membrane peptide HokC {ECO:0000313|EMBL:BAI30511.1};SubName: Full=Small toxic polypeptide HokC {ECO:0000313|EMBL:BAI30210.1};
InterProC8U736 
PFAMC8U736 
ProdomC8U736 
UniProtKBA0A0E1CS43SubName: Full=Protein hokC {ECO:0000313|EMBL:AHQ34022.1};
InterProA0A0E1CS43 
PFAMA0A0E1CS43 
ProdomA0A0E1CS43 
UniProtKBE8HES4SubName: Full=Putative prophage maintenance protein;
InterProE8HES4 
PFAME8HES4 
ProdomE8HES4 
UniProtKBH4FIG9SubName: Full=Prophage maintenance protein;
InterProH4FIG9 
PFAMH4FIG9 
ProdomH4FIG9 
UniProtKBK4WY49SubName: Full=Prophage maintenance protein {ECO:0000313|EMBL:EJE85692.1};
InterProK4WY49 
PFAMK4WY49 
ProdomK4WY49 
UniProtKBL3KSF1SubName: Full=Protein hokD {ECO:0000313|EMBL:ELE01796.1};
InterProL3KSF1 
PFAML3KSF1 
ProdomL3KSF1 
UniProtKBL3VUU7SubName: Full=Protein hokD;
InterProL3VUU7 
PFAML3VUU7 
ProdomL3VUU7 
UniProtKBH1FR30SubName: Full=Protein hokD;
InterProH1FR30 
PFAMH1FR30 
ProdomH1FR30 
UniProtKBI2PL99SubName: Full=Protein hokD;
InterProI2PL99 
PFAMI2PL99 
ProdomI2PL99 
UniProtKBI4PNE2SubName: Full=Prophage maintenance protein;
InterProI4PNE2 
PFAMI4PNE2 
ProdomI4PNE2 
UniProtKBK4W0H2SubName: Full=Prophage maintenance protein;
InterProK4W0H2 
PFAMK4W0H2 
ProdomK4W0H2 
UniProtKBK4WQ84SubName: Full=Prophage maintenance protein;
InterProK4WQ84 
PFAMK4WQ84 
ProdomK4WQ84 
UniProtKBL2YVU0SubName: Full=Protein hokD;
InterProL2YVU0 
PFAML2YVU0 
ProdomL2YVU0 
UniProtKBL2Z9H3SubName: Full=Protein hokD;
InterProL2Z9H3 
PFAML2Z9H3 
ProdomL2Z9H3 
UniProtKBE9Y977SubName: Full=Hok/gef family protein {ECO:0000313|EMBL:EGB68973.1};
InterProE9Y977 
PFAME9Y977 
ProdomE9Y977 
UniProtKBL3JDU8SubName: Full=Protein hokD;
InterProL3JDU8 
PFAML3JDU8 
ProdomL3JDU8 
UniProtKBL3QXM5SubName: Full=Protein hokD;
InterProL3QXM5 
PFAML3QXM5 
ProdomL3QXM5 
UniProtKBC9QV22SubName: Full=Hok/gef cell toxic protein;SubName: Full=Prophage maintenance protein;Flags: Precursor;
InterProC9QV22 
PFAMC9QV22 
ProdomC9QV22 
UniProtKBE9WT29SubName: Full=Hok/gef family protein;
InterProE9WT29 
PFAME9WT29 
ProdomE9WT29 
UniProtKBE9W4Q4SubName: Full=Hok/gef family protein;
InterProE9W4Q4 
PFAME9W4Q4 
ProdomE9W4Q4 
UniProtKBL3EC59SubName: Full=Protein hokD;
InterProL3EC59 
PFAML3EC59 
ProdomL3EC59 
UniProtKBB1IR29SubName: Full=Hok/gef cell toxic protein;Flags: Precursor;
InterProB1IR29 
PFAMB1IR29 
ProdomB1IR29 
UniProtKBL4G4V1SubName: Full=Protein hokD;
InterProL4G4V1 
PFAML4G4V1 
ProdomL4G4V1 
UniProtKBC6VDC5SubName: Full=Qin prophage small toxic polypeptide;SubName: Full=Small toxic polypeptide;
InterProC6VDC5 
PFAMC6VDC5 
ProdomC6VDC5 
UniProtKBA0A0E2A0P7SubName: Full=Prophage maintenance protein {ECO:0000313|EMBL:EIL39144.1};
InterProA0A0E2A0P7 
PFAMA0A0E2A0P7 
ProdomA0A0E2A0P7 
UniProtKBA0A0H3X7Z8SubName: Full=Qin prophage small toxic polypeptide {ECO:0000313|EMBL:AKM35103.1};
InterProA0A0H3X7Z8 
PFAMA0A0H3X7Z8 
ProdomA0A0H3X7Z8 
UniProtKBD3QX39SubName: Full=Putative cell killing protein encoded within cryptic prophage CP-933M {ECO:0000313|EMBL:ADD57029.1};
InterProD3QX39 
PFAMD3QX39 
ProdomD3QX39 
UniProtKBE1HT06SubName: Full=Hok/gef family protein {ECO:0000313|EMBL:EFK88967.1};
InterProE1HT06 
PFAME1HT06 
ProdomE1HT06 
UniProtKBE2QMC9SubName: Full=Protein HokD {ECO:0000313|EMBL:KLX03665.1};SubName: Full=Regulatory protein {ECO:0000313|EMBL:KHJ18364.1};SubName: Full=Strain O157 SvETEC scaffold58.1, whole genome shotgun sequence {EC
InterProE2QMC9 
PFAME2QMC9 
ProdomE2QMC9 
UniProtKBL3EGC9SubName: Full=Protein hokD;
InterProL3EGC9 
PFAML3EGC9 
ProdomL3EGC9