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Model Details Page

Sequence Information

Primary Database Link A0A023Z0Z5
Original Database ID sp P0ACR7
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation subname: full=lysr family transcriptional
regulator yfer {eco:0000313|embl:ahy71
720.1};
Sequence Length 308

Dataset Information:

The newest dataset for this sequence was created on 2018-08-21. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region89-292
Protein Length308
Template PDB Code2y7pA
Template Region93-297
Sequence Identity13%
E-Value0
GA3410.81
MPQS0.859338
z-DOPE-0.01
TSVMod MethodMSALL
TSVMod RMSD5.886
TSVMod NO350.605
DatasetMW-Noddd2
ModPipe VersionSVN.r1620
Model Date2018-08-21

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2y7p
DBALI2y7pA 
JenaImageLibrary2y7p 
Target Sequence
UniProtKBE6BA73SubName: Full=Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:EFU96291.1};
InterProE6BA73 
PFAME6BA73 
ProdomE6BA73 
UniProtKBA0A029HT85SubName: Full=Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:EZJ39137.1};
InterProA0A029HT85 
PFAMA0A029HT85 
ProdomA0A029HT85 
UniProtKBA0A029IPA4SubName: Full=Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:EZJ50266.1};
InterProA0A029IPA4 
PFAMA0A029IPA4 
ProdomA0A029IPA4 
UniProtKBA0A069YTU0SubName: Full=Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KDU50687.1};
InterProA0A069YTU0 
PFAMA0A069YTU0 
ProdomA0A069YTU0 
UniProtKBA0A070CEY9SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:KDV27381.1};
InterProA0A070CEY9 
PFAMA0A070CEY9 
ProdomA0A070CEY9 
UniProtKBA0A070FP80SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:KDV64304.1};
InterProA0A070FP80 
PFAMA0A070FP80 
ProdomA0A070FP80 
UniProtKBA0A070V1L4SubName: Full=Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KDX47669.1};
InterProA0A070V1L4 
PFAMA0A070V1L4 
ProdomA0A070V1L4 
UniProtKBA0A071CFI6SubName: Full=Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KDY92616.1};
InterProA0A071CFI6 
PFAMA0A071CFI6 
ProdomA0A071CFI6 
UniProtKBA0A071D4I8SubName: Full=Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KDZ36254.1};
InterProA0A071D4I8 
PFAMA0A071D4I8 
ProdomA0A071D4I8 
UniProtKBA0A073GAM5SubName: Full=Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KEJ60115.1};
InterProA0A073GAM5 
PFAMA0A073GAM5 
ProdomA0A073GAM5 
UniProtKBA0A073GRB3SubName: Full=Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KEJ67560.1};
InterProA0A073GRB3 
PFAMA0A073GRB3 
ProdomA0A073GRB3 
UniProtKBA0A028C997SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:EZE32197.1};
InterProA0A028C997 
PFAMA0A028C997 
ProdomA0A028C997 
UniProtKBA0A028ATZ6SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:EZE14309.1};
InterProA0A028ATZ6 
PFAMA0A028ATZ6 
ProdomA0A028ATZ6 
UniProtKBA7ZPK9SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABV20925.1};
InterProA7ZPK9 
PFAMA7ZPK9 
ProdomA7ZPK9 
UniProtKBE1HTW2SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EFK88638.1};
InterProE1HTW2 
PFAME1HTW2 
ProdomE1HTW2 
UniProtKBE7UKP0SubName: Full=LysR family transcriptional regulator YfeR;
InterProE7UKP0 
PFAME7UKP0 
ProdomE7UKP0 
UniProtKBE8YBB3SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADX49954.1};
InterProE8YBB3 
PFAME8YBB3 
ProdomE8YBB3 
UniProtKBE9TBJ0SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EGB89391.1};
InterProE9TBJ0 
PFAME9TBJ0 
ProdomE9TBJ0 
UniProtKBE7IHF4SubName: Full=Bacterial regulatory helix-turn-helix protein, lysR family protein;
InterProE7IHF4 
PFAME7IHF4 
ProdomE7IHF4 
UniProtKBF4SHC6SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:EGI12047.1};
InterProF4SHC6 
PFAMF4SHC6 
ProdomF4SHC6 
UniProtKBE9XKJ1SubName: Full=LysR substrate binding domain-containing protein {ECO:0000313|EMBL:EGB72497.1};
InterProE9XKJ1 
PFAME9XKJ1 
ProdomE9XKJ1 
UniProtKBF4T1K3SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:EGI15070.1};
InterProF4T1K3 
PFAMF4T1K3 
ProdomF4T1K3 
UniProtKBE9XCH8SubName: Full=LysR substrate binding domain-containing protein;
InterProE9XCH8 
PFAME9XCH8 
ProdomE9XCH8 
UniProtKBC8TVB1SubName: Full=Predicted DNA-binding transcriptional regulator, LYSR-type {ECO:0000313|EMBL:BAI26661.1};
InterProC8TVB1 
PFAMC8TVB1 
ProdomC8TVB1 
UniProtKBA0A074IFV3SubName: Full=Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KEO09088.1};
InterProA0A074IFV3 
PFAMA0A074IFV3 
ProdomA0A074IFV3 
UniProtKBA0A079DEJ1SubName: Full=Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KDY18912.1};
InterProA0A079DEJ1 
PFAMA0A079DEJ1 
ProdomA0A079DEJ1 
UniProtKBB7MXR7SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CAR08883.1};
InterProB7MXR7 
PFAMB7MXR7 
ProdomB7MXR7 
UniProtKBB3IDP6SubName: Full=Transcriptional regulator, LysR family;
InterProB3IDP6 
PFAMB3IDP6 
ProdomB3IDP6 
UniProtKBB3HZ58SubName: Full=Transcriptional regulator, LysR family;
InterProB3HZ58 
PFAMB3HZ58 
ProdomB3HZ58 
UniProtKBB1XA79SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProB1XA79 
PFAMB1XA79 
ProdomB1XA79 
UniProtKBD2NKY8SubName: Full=Putative transcriptional regulator;
InterProD2NKY8 
PFAMD2NKY8 
ProdomD2NKY8 
UniProtKBC9QQD3SubName: Full=Putative DNA-binding transcriptional regulator;SubName: Full=Transcriptional regulator, LysR family;
InterProC9QQD3 
PFAMC9QQD3 
ProdomC9QQD3 
UniProtKBD8E2R9SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EFK47746.1};
InterProD8E2R9 
PFAMD8E2R9 
ProdomD8E2R9 
UniProtKBD8BWP1SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EFI88924.1};
InterProD8BWP1 
PFAMD8BWP1 
ProdomD8BWP1 
UniProtKBE0J1L0SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:AFH12240.1};SubName: Full=Predicted DNA-binding transcriptional regulator {ECO:0000313|EMBL:ADT76060.1};
InterProE0J1L0 
PFAME0J1L0 
ProdomE0J1L0 
UniProtKBE1JD14SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EFK66250.1};
InterProE1JD14 
PFAME1JD14 
ProdomE1JD14 
UniProtKBB3WU74SubName: Full=Transcriptional regulator, LysR family;
InterProB3WU74 
PFAMB3WU74 
ProdomB3WU74 
UniProtKBB6I6V3SubName: Full=Putative transcriptional regulator {ECO:0000313|EMBL:BAG78223.1};
InterProB6I6V3 
PFAMB6I6V3 
ProdomB6I6V3 
UniProtKBA0A0H4RWB5SubName: Full=DNA-binding transcriptional regulator {ECO:0000313|EMBL:AKP85220.1};
InterProA0A0H4RWB5 
PFAMA0A0H4RWB5 
ProdomA0A0H4RWB5 
UniProtKBA0A079G1R6SubName: Full=Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KDY68065.1};
InterProA0A079G1R6 
PFAMA0A079G1R6 
ProdomA0A079G1R6 
UniProtKBA0A079GVL7SubName: Full=Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KDY96384.1};
InterProA0A079GVL7 
PFAMA0A079GVL7 
ProdomA0A079GVL7 
UniProtKBA0A0A0FDJ6SubName: Full=Putative HTH-type transcriptional regulator YfeR {ECO:0000313|EMBL:KGM60393.1};
InterProA0A0A0FDJ6 
PFAMA0A0A0FDJ6 
ProdomA0A0A0FDJ6 
UniProtKBA0A0A8UF72SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CEK06120.1};
InterProA0A0A8UF72 
PFAMA0A0A8UF72 
ProdomA0A0A8UF72 
UniProtKBA0A0E0U136SubName: Full=Bacterial regulatory helix-turn-helix protein, lysR family protein {ECO:0000313|EMBL:AEE57568.1};
InterProA0A0E0U136 
PFAMA0A0E0U136 
ProdomA0A0E0U136 
UniProtKBA0A0E0XXJ7SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:AFS73379.1};
InterProA0A0E0XXJ7 
PFAMA0A0E0XXJ7 
ProdomA0A0E0XXJ7 
UniProtKBA0A0E2U8F6SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:EZE24201.1};
InterProA0A0E2U8F6 
PFAMA0A0E2U8F6 
ProdomA0A0E2U8F6 
UniProtKBA0A0E3MZK8SubName: Full=Putative HTH-type transcriptional regulator YfeR {ECO:0000313|EMBL:AKA91464.1};
InterProA0A0E3MZK8 
PFAMA0A0E3MZK8 
ProdomA0A0E3MZK8 
UniProtKBA0A0F6MFB0SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:EID62819.1};
InterProA0A0F6MFB0 
PFAMA0A0F6MFB0 
ProdomA0A0F6MFB0 
UniProtKBA0A0G2XBH9SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:AKI67505.1};
InterProA0A0G2XBH9 
PFAMA0A0G2XBH9 
ProdomA0A0G2XBH9 
UniProtKBE3PF09SubName: Full=LysR-family transcriptional regulator {ECO:0000313|EMBL:CBJ02025.1};
InterProE3PF09 
PFAME3PF09 
ProdomE3PF09 
UniProtKBE1I5C6SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EFK72469.1};
InterProE1I5C6 
PFAME1I5C6 
ProdomE1I5C6 
UniProtKBA0A023Z0Z5SubName: Full=LysR family transcriptional regulator YfeR {ECO:0000313|EMBL:AHY71720.1};
InterProA0A023Z0Z5 
PFAMA0A023Z0Z5 
ProdomA0A023Z0Z5 
UniProtKBF4UPE0SubName: Full=Transcriptional regulator, LysR family;
InterProF4UPE0 
PFAMF4UPE0 
ProdomF4UPE0 
UniProtKBA0A026UKH8SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:EZA30156.1};
InterProA0A026UKH8 
PFAMA0A026UKH8 
ProdomA0A026UKH8 
UniProtKBA0A029PH99SubName: Full=Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:EZK21103.1};
InterProA0A029PH99 
PFAMA0A029PH99 
ProdomA0A029PH99 
UniProtKBA0A071AMM6SubName: Full=Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KDY63733.1};
InterProA0A071AMM6 
PFAMA0A071AMM6 
ProdomA0A071AMM6 
UniProtKBA0A073T8E2SubName: Full=Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KEL22834.1};
InterProA0A073T8E2 
PFAMA0A073T8E2 
ProdomA0A073T8E2 
UniProtKBA0A080GJH9SubName: Full=Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KEN89392.1};
InterProA0A080GJH9 
PFAMA0A080GJH9 
ProdomA0A080GJH9 
UniProtKBA0A0E1M007SubName: Full=Transcriptional regulator of yefH {ECO:0000313|EMBL:AJF57272.1};
InterProA0A0E1M007 
PFAMA0A0E1M007 
ProdomA0A0E1M007 
UniProtKBA0A0G3KJ20SubName: Full=LysR family transcripitonal regulator {ECO:0000313|EMBL:AKK54971.1};
InterProA0A0G3KJ20 
PFAMA0A0G3KJ20 
ProdomA0A0G3KJ20 
UniProtKBC4ZVT9SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProC4ZVT9 
PFAMC4ZVT9 
ProdomC4ZVT9 
UniProtKBD7YGA5SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EFK03676.1};
InterProD7YGA5 
PFAMD7YGA5 
ProdomD7YGA5 
UniProtKBE9U2C7SubName: Full=LysR substrate binding domain protein;
InterProE9U2C7 
PFAME9U2C7 
ProdomE9U2C7 
UniProtKBE6BH72SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EFU36392.1};
InterProE6BH72 
PFAME6BH72 
ProdomE6BH72 
UniProtKBD7YBE4SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EFJ95036.1};
InterProD7YBE4 
PFAMD7YBE4 
ProdomD7YBE4 
UniProtKBA0A025CWE1SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:EYV19678.1};
InterProA0A025CWE1 
PFAMA0A025CWE1 
ProdomA0A025CWE1 
UniProtKBD6HZH8SubName: Full=LysR family transcriptional regulator YfeR {ECO:0000313|EMBL:EFE63027.2};
InterProD6HZH8 
PFAMD6HZH8 
ProdomD6HZH8 
UniProtKBA0A025FM19SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:EYV53078.1};
InterProA0A025FM19 
PFAMA0A025FM19 
ProdomA0A025FM19 
UniProtKBA0A079Y746SubName: Full=Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KEJ56722.1};
InterProA0A079Y746 
PFAMA0A079Y746 
ProdomA0A079Y746 
UniProtKBD2AGL7SubName: Full=Putative HTH-type transcriptional regulator yfeR {ECO:0000313|EMBL:ADA74809.1};
InterProD2AGL7 
PFAMD2AGL7 
ProdomD2AGL7 
UniProtKBE7J5K6SubName: Full=Bacterial regulatory helix-turn-helix protein, lysR family protein;
InterProE7J5K6 
PFAME7J5K6 
ProdomE7J5K6 
UniProtKBA0A026HD15SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:EYY80028.1};
InterProA0A026HD15 
PFAMA0A026HD15 
ProdomA0A026HD15 
UniProtKBA0A070YTS8SubName: Full=Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KDX90403.1};
InterProA0A070YTS8 
PFAMA0A070YTS8 
ProdomA0A070YTS8 
UniProtKBA0A080FS38SubName: Full=Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KEN66899.1};
InterProA0A080FS38 
PFAMA0A080FS38 
ProdomA0A080FS38 
UniProtKBA0A0G3I027SubName: Full=Putative DNA-binding transcriptional regulator protein {ECO:0000313|EMBL:AKK18335.1};
InterProA0A0G3I027 
PFAMA0A0G3I027 
ProdomA0A0G3I027 
UniProtKBD8BQH9SubName: Full=LysR substrate binding domain protein;
InterProD8BQH9 
PFAMD8BQH9 
ProdomD8BQH9 
UniProtKBE7HBP5SubName: Full=Bacterial regulatory helix-turn-helix , lysR family protein;
InterProE7HBP5 
PFAME7HBP5 
ProdomE7HBP5 
UniProtKBA0A094QUA6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CDX07870.1};
InterProA0A094QUA6 
PFAMA0A094QUA6 
ProdomA0A094QUA6 
UniProtKBA0A0C7MPU4SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:CEP55831.1};
InterProA0A0C7MPU4 
PFAMA0A0C7MPU4 
ProdomA0A0C7MPU4 
UniProtKBA0A0E2A5W3SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:EIL43676.1};
InterProA0A0E2A5W3 
PFAMA0A0E2A5W3 
ProdomA0A0E2A5W3 
UniProtKBA0A0F6GQW7SubName: Full=Putative transcriptional regulator {ECO:0000313|EMBL:BAI55812.1};
InterProA0A0F6GQW7 
PFAMA0A0F6GQW7 
ProdomA0A0F6GQW7 
UniProtKBA0A0H3X7I6SubName: Full=DNA-binding transcriptional regulator {ECO:0000313|EMBL:AKM35967.1};
InterProA0A0H3X7I6 
PFAMA0A0H3X7I6 
ProdomA0A0H3X7I6 
UniProtKBB7LCF3SubName: Full=YfeR protein {ECO:0000313|EMBL:CAU98564.1};
InterProB7LCF3 
PFAMB7LCF3 
ProdomB7LCF3 
UniProtKBB7M6R8SubName: Full=Putative DNA-binding transcriptional regulator;
InterProB7M6R8 
PFAMB7M6R8 
ProdomB7M6R8 
UniProtKBB2TWZ9SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACD07768.1};
InterProB2TWZ9 
PFAMB2TWZ9 
ProdomB2TWZ9 
UniProtKBD7XJT7SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EFJ88370.1};
InterProD7XJT7 
PFAMD7XJT7 
ProdomD7XJT7 
UniProtKBD8EMN7SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EFK51040.1};
InterProD8EMN7 
PFAMD8EMN7 
ProdomD8EMN7 
UniProtKBA0A079FHX4SubName: Full=Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KDY54389.1};
InterProA0A079FHX4 
PFAMA0A079FHX4 
ProdomA0A079FHX4 
UniProtKBA0A074HSS7SubName: Full=Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KEN98986.1};
InterProA0A074HSS7 
PFAMA0A074HSS7 
ProdomA0A074HSS7 
UniProtKBA0A073FUC4SubName: Full=Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KEJ46005.1};
InterProA0A073FUC4 
PFAMA0A073FUC4 
ProdomA0A073FUC4 
UniProtKBC8U7T8SubName: Full=Predicted DNA-binding transcriptional regulator, LYSR-type {ECO:0000313|EMBL:BAI31693.1};
InterProC8U7T8 
PFAMC8U7T8 
ProdomC8U7T8 
UniProtKBE9W370SubName: Full=LysR substrate binding domain-containing protein;
InterProE9W370 
PFAME9W370 
ProdomE9W370 
UniProtKBF4M5W9SubName: Full=Bacterial regulatory helix-turn-helix protein, lysR family protein;
InterProF4M5W9 
PFAMF4M5W9 
ProdomF4M5W9 
UniProtKBE7I025SubName: Full=Bacterial regulatory helix-turn-helix protein, lysR family protein;
InterProE7I025 
PFAME7I025 
ProdomE7I025 
UniProtKBA0A027TZT7SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:EZD30522.1};
InterProA0A027TZT7 
PFAMA0A027TZT7 
ProdomA0A027TZT7 
UniProtKBA0A028EED5SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:EZE58199.1};
InterProA0A028EED5 
PFAMA0A028EED5 
ProdomA0A028EED5 
UniProtKBA0A069XN72SubName: Full=Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KDU28985.1};
InterProA0A069XN72 
PFAMA0A069XN72 
ProdomA0A069XN72 
UniProtKBA0A070CR68SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:KDV31378.1};
InterProA0A070CR68 
PFAMA0A070CR68 
ProdomA0A070CR68 
UniProtKBA0A071CD42SubName: Full=Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KDZ16726.1};
InterProA0A071CD42 
PFAMA0A071CD42 
ProdomA0A071CD42 
UniProtKBC8UDY4SubName: Full=Predicted DNA-binding transcriptional regulator, LYSR-type {ECO:0000313|EMBL:BAI36956.1};
InterProC8UDY4 
PFAMC8UDY4 
ProdomC8UDY4