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Sequence Information

Primary Database Link A0A029HBX9
Original Database ID ref NP_418513.4
Organism Escherichia coli, Klebsiella oxytoca, etc.
Annotation subname: full=hth-type transcriptional
regulator rpir {eco:0000313|embl:ezj34103
.1};
Sequence Length 296

Dataset Information:

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Model Information

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Target Region15-287
Protein Length296
Template PDB Code4ivnA
Template Region6-272
Sequence Identity24%
E-Value0
GA3411
MPQS1.246
z-DOPE-0.41
TSVMod MethodMSALL
TSVMod RMSD3.763
TSVMod NO350.822
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4ivn
DBALI4ivnA 
JenaImageLibrary4ivn 
Target Sequence
UniProtKBG0F4P6SubName: Full=Helix-turn-helix domain, rpiR family protein {ECO:0000313|EMBL:AEJ59496.1};
InterProG0F4P6 
PFAMG0F4P6 
ProdomG0F4P6 
UniProtKBA0A071BZ69SubName: Full=HTH-type transcriptional regulator rpiR {ECO:0000313|EMBL:KDY89601.1};
InterProA0A071BZ69 
PFAMA0A071BZ69 
ProdomA0A071BZ69 
UniProtKBA0A071CK63SubName: Full=HTH-type transcriptional regulator rpiR {ECO:0000313|EMBL:KDZ19308.1};
InterProA0A071CK63 
PFAMA0A071CK63 
ProdomA0A071CK63 
UniProtKBA0A073TES4SubName: Full=HTH-type transcriptional regulator rpiR {ECO:0000313|EMBL:KEL26421.1};
InterProA0A073TES4 
PFAMA0A073TES4 
ProdomA0A073TES4 
UniProtKBA0A074HEV8SubName: Full=HTH-type transcriptional regulator rpiR {ECO:0000313|EMBL:KEN94050.1};
InterProA0A074HEV8 
PFAMA0A074HEV8 
ProdomA0A074HEV8 
UniProtKBA0A079EZC7SubName: Full=HTH-type transcriptional regulator rpiR {ECO:0000313|EMBL:KDY50648.1};
InterProA0A079EZC7 
PFAMA0A079EZC7 
ProdomA0A079EZC7 
UniProtKBA0A079FUX9SubName: Full=HTH-type transcriptional regulator rpiR {ECO:0000313|EMBL:KDY66109.1};
InterProA0A079FUX9 
PFAMA0A079FUX9 
ProdomA0A079FUX9 
UniProtKBA0A080HVB6SubName: Full=HTH-type transcriptional regulator rpiR {ECO:0000313|EMBL:KEO20836.1};
InterProA0A080HVB6 
PFAMA0A080HVB6 
ProdomA0A080HVB6 
UniProtKBA0A0E0U6K9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEE59431.1};
InterProA0A0E0U6K9 
PFAMA0A0E0U6K9 
ProdomA0A0E0U6K9 
UniProtKBA0A0E1M4R4SubName: Full=D-allose-inducible als operon transcriptional repressor {ECO:0000313|EMBL:AJF58932.1};
InterProA0A0E1M4R4 
PFAMA0A0E1M4R4 
ProdomA0A0E1M4R4 
UniProtKBA0A0E1SV48SubName: Full=HTH-type transcriptional regulator RpiR (Als operon repressor) {ECO:0000313|EMBL:EDU63428.1};
InterProA0A0E1SV48 
PFAMA0A0E1SV48 
ProdomA0A0E1SV48 
UniProtKBA0A070YE94SubName: Full=HTH-type transcriptional regulator rpiR {ECO:0000313|EMBL:KDX88774.1};
InterProA0A070YE94 
PFAMA0A070YE94 
ProdomA0A070YE94 
UniProtKBA0A070FBB7SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:KDV62427.1};
InterProA0A070FBB7 
PFAMA0A070FBB7 
ProdomA0A070FBB7 
UniProtKBB3HRY6SubName: Full=HTH-type transcriptional regulator RpiR;
InterProB3HRY6 
PFAMB3HRY6 
ProdomB3HRY6 
UniProtKBF4LYM4SubName: Full=Putative uncharacterized protein;
InterProF4LYM4 
PFAMF4LYM4 
ProdomF4LYM4 
UniProtKBG4PNT8SubName: Full=DNA-binding transcriptional repressor;
InterProG4PNT8 
PFAMG4PNT8 
ProdomG4PNT8 
UniProtKBG5KVU4SubName: Full=DNA-binding transcriptional repressor;
InterProG5KVU4 
PFAMG5KVU4 
ProdomG5KVU4 
UniProtKBH1BTZ7SubName: Full=HTH-type transcriptional regulator rpiR {ECO:0000313|EMBL:EHP66930.1};
InterProH1BTZ7 
PFAMH1BTZ7 
ProdomH1BTZ7 
UniProtKBB1ITX0SubName: Full=Transcriptional regulator, RpiR family;
InterProB1ITX0 
PFAMB1ITX0 
ProdomB1ITX0 
UniProtKBB1LPQ8SubName: Full=HTH-type transcriptional regulator RpiR (Als operon repressor) {ECO:0000313|EMBL:ACB17321.1};
InterProB1LPQ8 
PFAMB1LPQ8 
ProdomB1LPQ8 
UniProtKBH1END8SubName: Full=HTH-type transcriptional regulator rpiR;
InterProH1END8 
PFAMH1END8 
ProdomH1END8 
UniProtKBB2N279SubName: Full=HTH-type transcriptional regulator RpiR (Als operon repressor);
InterProB2N279 
PFAMB2N279 
ProdomB2N279 
UniProtKBH1DRQ5SubName: Full=HTH-type transcriptional regulator rpiR;
InterProH1DRQ5 
PFAMH1DRQ5 
ProdomH1DRQ5 
UniProtKBG2CSZ8SubName: Full=Helix-turn-helix domain, rpiR family protein;
InterProG2CSZ8 
PFAMG2CSZ8 
ProdomG2CSZ8 
UniProtKBA0A0E3N0T5SubName: Full=HTH-type transcriptional regulator RpiR {ECO:0000313|EMBL:AKA93254.1};
InterProA0A0E3N0T5 
PFAMA0A0E3N0T5 
ProdomA0A0E3N0T5 
UniProtKBA0A0F6GVR5SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:BAI57510.1};
InterProA0A0F6GVR5 
PFAMA0A0F6GVR5 
ProdomA0A0F6GVR5 
UniProtKBE3PD09SubName: Full=DNA-binding transcriptional repressor {ECO:0000313|EMBL:CBJ03907.1};
InterProE3PD09 
PFAME3PD09 
ProdomE3PD09 
UniProtKBE1J3A8SubName: Full=Als operon repressor {ECO:0000313|EMBL:EFK69765.1};
InterProE1J3A8 
PFAME1J3A8 
ProdomE1J3A8 
UniProtKBD8A9A8SubName: Full=Als operon repressor {ECO:0000313|EMBL:EFK20275.1};
InterProD8A9A8 
PFAMD8A9A8 
ProdomD8A9A8 
UniProtKBB7MJW4SubName: Full=DNA-binding transcriptional repressor {ECO:0000313|EMBL:CAR05748.1};
InterProB7MJW4 
PFAMB7MJW4 
ProdomB7MJW4 
UniProtKBE6BPM8SubName: Full=Als operon repressor {ECO:0000313|EMBL:EFU33739.1};
InterProE6BPM8 
PFAME6BPM8 
ProdomE6BPM8 
UniProtKBE6A6C6SubName: Full=Als operon repressor;
InterProE6A6C6 
PFAME6A6C6 
ProdomE6A6C6 
UniProtKBE9VVA8SubName: Full=RpiR family protein Helix-turn-helix domain-containing protein;
InterProE9VVA8 
PFAME9VVA8 
ProdomE9VVA8 
UniProtKBE9VD34SubName: Full=RpiR family protein Helix-turn-helix domain-containing protein;
InterProE9VD34 
PFAME9VD34 
ProdomE9VD34 
UniProtKBE9WY94SubName: Full=RpiR family protein Helix-turn-helix domain-containing protein;
InterProE9WY94 
PFAME9WY94 
ProdomE9WY94 
UniProtKBF9QYZ1SubName: Full=DNA-binding transcriptional repressor RpiR;
InterProF9QYZ1 
PFAMF9QYZ1 
ProdomF9QYZ1 
UniProtKBE1PCK1SubName: Full=Transcriptional repressor of ribose catabolism RpiR/YebK family;
InterProE1PCK1 
PFAME1PCK1 
ProdomE1PCK1 
UniProtKBE1RZA3SubName: Full=DNA-binding transcriptional repressor RpiR;
InterProE1RZA3 
PFAME1RZA3 
ProdomE1RZA3 
UniProtKBD8AHV7SubName: Full=Als operon repressor {ECO:0000313|EMBL:EFK17279.1};
InterProD8AHV7 
PFAMD8AHV7 
ProdomD8AHV7 
UniProtKBA0A0G3HN99SubName: Full=DNA-binding transcriptional repressor protein {ECO:0000313|EMBL:AKK14230.1};
InterProA0A0G3HN99 
PFAMA0A0G3HN99 
ProdomA0A0G3HN99 
UniProtKBA0A0G3J997SubName: Full=RpiR family transcriptional regulator {ECO:0000313|EMBL:AKK35696.1};
InterProA0A0G3J997 
PFAMA0A0G3J997 
ProdomA0A0G3J997 
UniProtKBB7UPR3SubName: Full=DNA-binding transcriptional repressor {ECO:0000313|EMBL:CAS11966.1};
InterProB7UPR3 
PFAMB7UPR3 
ProdomB7UPR3 
UniProtKBC6UK87SubName: Full=DNA-binding transcriptional repressor;
InterProC6UK87 
PFAMC6UK87 
ProdomC6UK87 
UniProtKBC5A183SubName: Full=DNA-binding transcriptional repressor;
InterProC5A183 
PFAMC5A183 
ProdomC5A183 
UniProtKBD7XTI0SubName: Full=Als operon repressor {ECO:0000313|EMBL:EFJ85401.1};
InterProD7XTI0 
PFAMD7XTI0 
ProdomD7XTI0 
UniProtKBC2DTB0SubName: Full=Als operon repressor;
InterProC2DTB0 
PFAMC2DTB0 
ProdomC2DTB0 
UniProtKBB7NSQ2SubName: Full=DNA-binding transcriptional repressor;
InterProB7NSQ2 
PFAMB7NSQ2 
ProdomB7NSQ2 
UniProtKBD8CBR2SubName: Full=Als operon repressor;
InterProD8CBR2 
PFAMD8CBR2 
ProdomD8CBR2 
UniProtKBD8B5S2SubName: Full=Als operon repressor {ECO:0000313|EMBL:EFJ65576.1};
InterProD8B5S2 
PFAMD8B5S2 
ProdomD8B5S2 
UniProtKBG0DBU2SubName: Full=DNA-binding transcriptional repressor;
InterProG0DBU2 
PFAMG0DBU2 
ProdomG0DBU2 
UniProtKBF4U263SubName: Full=HTH-type transcriptional regulator RpiR (Als operon repressor);
InterProF4U263 
PFAMF4U263 
ProdomF4U263 
UniProtKBA0A029HBX9SubName: Full=HTH-type transcriptional regulator rpiR {ECO:0000313|EMBL:EZJ34103.1};
InterProA0A029HBX9 
PFAMA0A029HBX9 
ProdomA0A029HBX9 
UniProtKBB1XCX4SubName: Full=DNA-binding transcriptional repressor;
InterProB1XCX4 
PFAMB1XCX4 
ProdomB1XCX4 
UniProtKBA0A069XRN2SubName: Full=HTH-type transcriptional regulator rpiR {ECO:0000313|EMBL:KDU31891.1};
InterProA0A069XRN2 
PFAMA0A069XRN2 
ProdomA0A069XRN2 
UniProtKBA0A071D743SubName: Full=HTH-type transcriptional regulator rpiR {ECO:0000313|EMBL:KDZ36848.1};
InterProA0A071D743 
PFAMA0A071D743 
ProdomA0A071D743 
UniProtKBA0A079YAS0SubName: Full=HTH-type transcriptional regulator rpiR {ECO:0000313|EMBL:KEJ53801.1};
InterProA0A079YAS0 
PFAMA0A079YAS0 
ProdomA0A079YAS0 
UniProtKBA0A0E2KYF3SubName: Full=HTH-type transcriptional regulator rpiR {ECO:0000313|EMBL:EQX22792.1};
InterProA0A0E2KYF3 
PFAMA0A0E2KYF3 
ProdomA0A0E2KYF3 
UniProtKBA0A0H3XCB7SubName: Full=DNA-binding transcriptional repressor {ECO:0000313|EMBL:AKM37662.1};
InterProA0A0H3XCB7 
PFAMA0A0H3XCB7 
ProdomA0A0H3XCB7 
UniProtKBD7Z367SubName: Full=Als operon repressor;
InterProD7Z367 
PFAMD7Z367 
ProdomD7Z367 
UniProtKBE1IS87SubName: Full=Als operon repressor {ECO:0000313|EMBL:EFO57825.1};
InterProE1IS87 
PFAME1IS87 
ProdomE1IS87 
UniProtKBE3XKK3SubName: Full=Helix-turn-helix domain, rpiR family protein {ECO:0000313|EMBL:EFR17572.1};
InterProE3XKK3 
PFAME3XKK3 
ProdomE3XKK3 
UniProtKBE9TNZ7SubName: Full=Als operon repressor;
InterProE9TNZ7 
PFAME9TNZ7 
ProdomE9TNZ7 
UniProtKBH0QFV3SubName: Full=DNA-binding transcriptional repressor;
InterProH0QFV3 
PFAMH0QFV3 
ProdomH0QFV3 
UniProtKBG2B2T6SubName: Full=Helix-turn-helix domain, rpiR family protein;
InterProG2B2T6 
PFAMG2B2T6 
ProdomG2B2T6 
UniProtKBE9TK54SubName: Full=Als operon repressor {ECO:0000313|EMBL:EGB86398.1};
InterProE9TK54 
PFAME9TK54 
ProdomE9TK54 
UniProtKBA0A029IGR4SubName: Full=HTH-type transcriptional regulator rpiR {ECO:0000313|EMBL:EZJ47789.1};
InterProA0A029IGR4 
PFAMA0A029IGR4 
ProdomA0A029IGR4 
UniProtKBE7JII2SubName: Full=Helix-turn-helix domain, rpiR family protein;
InterProE7JII2 
PFAME7JII2 
ProdomE7JII2 
UniProtKBA0A029L6G4SubName: Full=HTH-type transcriptional regulator rpiR {ECO:0000313|EMBL:EZJ80566.1};
InterProA0A029L6G4 
PFAMA0A029L6G4 
ProdomA0A029L6G4 
UniProtKBA0A0H3EQ02SubName: Full=DNA-binding transcriptional repressor RpiR {ECO:0000313|EMBL:ADR29511.1};
InterProA0A0H3EQ02 
PFAMA0A0H3EQ02 
ProdomA0A0H3EQ02 
UniProtKBE6AW09SubName: Full=Als operon repressor;
InterProE6AW09 
PFAME6AW09 
ProdomE6AW09 
UniProtKBG2D792SubName: Full=Helix-turn-helix domain, rpiR family protein;
InterProG2D792 
PFAMG2D792 
ProdomG2D792 
UniProtKBA0A029LQN7SubName: Full=HTH-type transcriptional regulator rpiR {ECO:0000313|EMBL:EZJ87216.1};
InterProA0A029LQN7 
PFAMA0A029LQN7 
ProdomA0A029LQN7 
UniProtKBA0A079HC01SubName: Full=HTH-type transcriptional regulator rpiR {ECO:0000313|EMBL:KDY98706.1};
InterProA0A079HC01 
PFAMA0A079HC01 
ProdomA0A079HC01 
UniProtKBA0A0H3MMW9SubName: Full=DNA-binding transcriptional repressor {ECO:0000313|EMBL:CAR20618.1};
InterProA0A0H3MMW9 
PFAMA0A0H3MMW9 
ProdomA0A0H3MMW9 
UniProtKBE1HIA2SubName: Full=Als operon repressor {ECO:0000313|EMBL:EFK92349.1};
InterProE1HIA2 
PFAME1HIA2 
ProdomE1HIA2 
UniProtKBE9U9D6SubName: Full=Als operon repressor;
InterProE9U9D6 
PFAME9U9D6 
ProdomE9U9D6 
UniProtKBG2BH29SubName: Full=Helix-turn-helix domain, rpiR family protein;
InterProG2BH29 
PFAMG2BH29 
ProdomG2BH29 
UniProtKBA0A0H4S1Y6SubName: Full=RpiR family transcriptional regulator {ECO:0000313|EMBL:AKP87125.1};
InterProA0A0H4S1Y6 
PFAMA0A0H4S1Y6 
ProdomA0A0H4S1Y6 
UniProtKBC9QUA8SubName: Full=RpiR protein;SubName: Full=Transcriptional regulator, RpiR family;
InterProC9QUA8 
PFAMC9QUA8 
ProdomC9QUA8 
UniProtKBD2NFL0SubName: Full=Transcriptional regulator;
InterProD2NFL0 
PFAMD2NFL0 
ProdomD2NFL0 
UniProtKBD8BNC6SubName: Full=Als operon repressor;
InterProD8BNC6 
PFAMD8BNC6 
ProdomD8BNC6 
UniProtKBE0R4P3SubName: Full=DNA-binding transcriptional repressor RpiR;
InterProE0R4P3 
PFAME0R4P3 
ProdomE0R4P3 
UniProtKBE2QJY2SubName: Full=Bifunctional protein glk {ECO:0000313|EMBL:KGM67572.1};EC=2.7.1.2 {ECO:0000313|EMBL:KGM67572.1};SubName: Full=HTH-type transcriptional regulator RpiR {ECO:0000313|EMBL:KLW99364.1};SubNam
InterProE2QJY2 
PFAME2QJY2 
ProdomE2QJY2 
UniProtKBE2X294SubName: Full=Helix-turn-helix domain, rpiR family protein;
InterProE2X294 
PFAME2X294 
ProdomE2X294 
UniProtKBB7MSK3SubName: Full=DNA-binding transcriptional repressor {ECO:0000313|EMBL:CAR10928.2};
InterProB7MSK3 
PFAMB7MSK3 
ProdomB7MSK3 
UniProtKBE8Y4R5SubName: Full=Transcriptional regulator, RpiR family {ECO:0000313|EMBL:ADX52790.1};
InterProE8Y4R5 
PFAME8Y4R5 
ProdomE8Y4R5 
UniProtKBE9WJZ9SubName: Full=RpiR family protein Helix-turn-helix domain-containing protein;
InterProE9WJZ9 
PFAME9WJZ9 
ProdomE9WJZ9 
UniProtKBA0A0G2SGN5SubName: Full=RpiR family transcriptional regulator {ECO:0000313|EMBL:AJM76361.1};
InterProA0A0G2SGN5 
PFAMA0A0G2SGN5 
ProdomA0A0G2SGN5 
UniProtKBA0A0E2TMZ5SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EYV07501.1};
InterProA0A0E2TMZ5 
PFAMA0A0E2TMZ5 
ProdomA0A0E2TMZ5 
UniProtKBA0A0E0VDI9SubName: Full=DNA-binding transcriptional repressor {ECO:0000313|EMBL:AEQ15476.1};
InterProA0A0E0VDI9 
PFAMA0A0E0VDI9 
ProdomA0A0E0VDI9 
UniProtKBE4P7A9SubName: Full=DNA-binding transcriptional repressor RpiR;
InterProE4P7A9 
PFAME4P7A9 
ProdomE4P7A9 
UniProtKBB6I5W0SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:BAG79911.1};
InterProB6I5W0 
PFAMB6I5W0 
ProdomB6I5W0 
UniProtKBH1FJ34SubName: Full=HTH-type transcriptional regulator rpiR;
InterProH1FJ34 
PFAMH1FJ34 
ProdomH1FJ34 
UniProtKBB3HIA2SubName: Full=RpiR family transcriptional regulator {ECO:0000313|EMBL:AIF62561.1};
InterProB3HIA2 
PFAMB3HIA2 
ProdomB3HIA2 
UniProtKBA0A069Z3Y8SubName: Full=HTH-type transcriptional regulator rpiR {ECO:0000313|EMBL:KDU54303.1};
InterProA0A069Z3Y8 
PFAMA0A069Z3Y8 
ProdomA0A069Z3Y8 
UniProtKBA0A071AGR1SubName: Full=HTH-type transcriptional regulator rpiR {ECO:0000313|EMBL:KDY59199.1};
InterProA0A071AGR1 
PFAMA0A071AGR1 
ProdomA0A071AGR1 
UniProtKBA0A073GIV4SubName: Full=HTH-type transcriptional regulator rpiR {ECO:0000313|EMBL:KEJ64739.1};
InterProA0A073GIV4 
PFAMA0A073GIV4 
ProdomA0A073GIV4 
UniProtKBA0A079DD71SubName: Full=HTH-type transcriptional regulator rpiR {ECO:0000313|EMBL:KDY20113.1};
InterProA0A079DD71 
PFAMA0A079DD71 
ProdomA0A079DD71 
UniProtKBA0A080GK31SubName: Full=HTH-type transcriptional regulator rpiR {ECO:0000313|EMBL:KEN85221.1};
InterProA0A080GK31 
PFAMA0A080GK31 
ProdomA0A080GK31 
UniProtKBE5ZSE5SubName: Full=Als operon repressor;
InterProE5ZSE5 
PFAME5ZSE5 
ProdomE5ZSE5