University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A0A017K5M4
Original Database ID ref NP_415317.4
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation subname: full=bacterial regulatory
s, tetr family protein {eco:0000313|embl:eye0
6209.1};
Sequence Length 223

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region1-220
Protein Length223
Template PDB Code1t33A
Template Region1-220
Sequence Identity85%
E-Value0
GA3411
MPQS2.09475
z-DOPE-1.65
TSVMod MethodMTALL
TSVMod RMSD0.227
TSVMod NO351
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1t33structural genomics, the crystal structure of a putative transcriptional repressor (tetr/acrr family) from salmonella typhimurim lt2
DBALI1t33A 
CATH1.10.10.60 Domain: 1t33A01 Homeodomain-like (100%)
CATH1.10.357.10 Domain: 1t33A02 Tetracycline Repressor, domain 2 (100%)
JenaImageLibrary1t33 
Target Sequence
UniProtKBB3XFQ7SubName: Full=Transcriptional regulator, TetR family;
InterProB3XFQ7 
PFAMB3XFQ7 
ProdomB3XFQ7 
UniProtKBA0A028AW39SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EZE15105.1};
InterProA0A028AW39 
PFAMA0A028AW39 
ProdomA0A028AW39 
UniProtKBA0A028C8Z1SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EZE31774.1};
InterProA0A028C8Z1 
PFAMA0A028C8Z1 
ProdomA0A028C8Z1 
UniProtKBA0A029LVC9SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:EZJ88922.1};
InterProA0A029LVC9 
PFAMA0A029LVC9 
ProdomA0A029LVC9 
UniProtKBA0A029N073SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:EZK03235.1};
InterProA0A029N073 
PFAMA0A029N073 
ProdomA0A029N073 
UniProtKBA0A062Y8D2SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KDA59328.1};
InterProA0A062Y8D2 
PFAMA0A062Y8D2 
ProdomA0A062Y8D2 
UniProtKBA0A064U2B5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDH00631.1};
InterProA0A064U2B5 
PFAMA0A064U2B5 
ProdomA0A064U2B5 
UniProtKBA0A070DKS1SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:KDV38854.1};
InterProA0A070DKS1 
PFAMA0A070DKS1 
ProdomA0A070DKS1 
UniProtKBA0A070F3R4SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:KDV59777.1};
InterProA0A070F3R4 
PFAMA0A070F3R4 
ProdomA0A070F3R4 
UniProtKBA0A070P7V3SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KDW77256.1};
InterProA0A070P7V3 
PFAMA0A070P7V3 
ProdomA0A070P7V3 
UniProtKBA0A070PUE0SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KDW84741.1};
InterProA0A070PUE0 
PFAMA0A070PUE0 
ProdomA0A070PUE0 
UniProtKBA0A027U7R8SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EZD33322.1};
InterProA0A027U7R8 
PFAMA0A027U7R8 
ProdomA0A027U7R8 
UniProtKBA0A026V2K0SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EZA36183.1};
InterProA0A026V2K0 
PFAMA0A026V2K0 
ProdomA0A026V2K0 
UniProtKBA7ZJK7SubName: Full=Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABV20315.1};
InterProA7ZJK7 
PFAMA7ZJK7 
ProdomA7ZJK7 
UniProtKBB3HAY9SubName: Full=Transcriptional regulator YbiH, TetR family {ECO:0000313|EMBL:AIF61378.1};
InterProB3HAY9 
PFAMB3HAY9 
ProdomB3HAY9 
UniProtKBB7NA96SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CAR12149.1};
InterProB7NA96 
PFAMB7NA96 
ProdomB7NA96 
UniProtKBB7NNM6SubName: Full=Putative DNA-binding transcriptional regulator;
InterProB7NNM6 
PFAMB7NNM6 
ProdomB7NNM6 
UniProtKBC4ZXW8SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProC4ZXW8 
PFAMC4ZXW8 
ProdomC4ZXW8 
UniProtKBB7LJW3SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CAQ89813.1};
InterProB7LJW3 
PFAMB7LJW3 
ProdomB7LJW3 
UniProtKBC8U469SubName: Full=Predicted DNA-binding transcriptional regulator {ECO:0000313|EMBL:BAI29683.1};
InterProC8U469 
PFAMC8U469 
ProdomC8U469 
UniProtKBC6V2F5SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProC6V2F5 
PFAMC6V2F5 
ProdomC6V2F5 
UniProtKBC8UL14SubName: Full=Predicted DNA-binding transcriptional regulator {ECO:0000313|EMBL:BAI34814.1};
InterProC8UL14 
PFAMC8UL14 
ProdomC8UL14 
UniProtKBC6UDV9SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProC6UDV9 
PFAMC6UDV9 
ProdomC6UDV9 
UniProtKBA7ZY52SubName: Full=Transcriptional regulator, TetR family;
InterProA7ZY52 
PFAMA7ZY52 
ProdomA7ZY52 
UniProtKBA0A070YC12SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KDX84538.1};
InterProA0A070YC12 
PFAMA0A070YC12 
ProdomA0A070YC12 
UniProtKBA0A071B1S3SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KDY64422.1};
InterProA0A071B1S3 
PFAMA0A071B1S3 
ProdomA0A071B1S3 
UniProtKBA0A0F6E9X6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AIL39647.1};
InterProA0A0F6E9X6 
PFAMA0A0F6E9X6 
ProdomA0A0F6E9X6 
UniProtKBA0A0G3HJ37SubName: Full=Putative DNA-binding transcriptional regulator protein {ECO:0000313|EMBL:AKK13354.1};
InterProA0A0G3HJ37 
PFAMA0A0G3HJ37 
ProdomA0A0G3HJ37 
UniProtKBA0A0G3K054SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:AKK47395.1};
InterProA0A0G3K054 
PFAMA0A0G3K054 
ProdomA0A0G3K054 
UniProtKBA0A0H3EGR2SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:ADR26141.1};
InterProA0A0H3EGR2 
PFAMA0A0H3EGR2 
ProdomA0A0H3EGR2 
UniProtKBA0A0H3MFE0SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CAR16909.1};
InterProA0A0H3MFE0 
PFAMA0A0H3MFE0 
ProdomA0A0H3MFE0 
UniProtKBB2N6W8SubName: Full=Transcriptional regulator, TetR family;
InterProB2N6W8 
PFAMB2N6W8 
ProdomB2N6W8 
UniProtKBB3B8D3SubName: Full=Transcriptional regulator, TetR family;
InterProB3B8D3 
PFAMB3B8D3 
ProdomB3B8D3 
UniProtKBB3AJU6SubName: Full=Transcriptional regulator, TetR family;
InterProB3AJU6 
PFAMB3AJU6 
ProdomB3AJU6 
UniProtKBB3BXL4SubName: Full=Transcriptional regulator, TetR family;
InterProB3BXL4 
PFAMB3BXL4 
ProdomB3BXL4 
UniProtKBB3IL47SubName: Full=Transcriptional regulator, TetR family;
InterProB3IL47 
PFAMB3IL47 
ProdomB3IL47 
UniProtKBA0A0E3KEJ6SubName: Full=Putative HTH-type transcriptional regulator YbiH {ECO:0000313|EMBL:AKA89774.1};
InterProA0A0E3KEJ6 
PFAMA0A0E3KEJ6 
ProdomA0A0E3KEJ6 
UniProtKBA0A0E1ZSC9SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:EIL32203.1};
InterProA0A0E1ZSC9 
PFAMA0A0E1ZSC9 
ProdomA0A0E1ZSC9 
UniProtKBA0A0E1T503SubName: Full=Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDU64512.1};
InterProA0A0E1T503 
PFAMA0A0E1T503 
ProdomA0A0E1T503 
UniProtKBA0A071CHT5SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KDZ18605.1};
InterProA0A071CHT5 
PFAMA0A071CHT5 
ProdomA0A071CHT5 
UniProtKBA0A071DAB0SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KDZ38117.1};
InterProA0A071DAB0 
PFAMA0A071DAB0 
ProdomA0A071DAB0 
UniProtKBA0A079FF32SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KDY54883.1};
InterProA0A079FF32 
PFAMA0A079FF32 
ProdomA0A079FF32 
UniProtKBA0A079G1G3SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KDY67940.1};
InterProA0A079G1G3 
PFAMA0A079G1G3 
ProdomA0A079G1G3 
UniProtKBA0A080EQW0SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KEN51425.1};
InterProA0A080EQW0 
PFAMA0A080EQW0 
ProdomA0A080EQW0 
UniProtKBA0A080FH23SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KEN59120.1};
InterProA0A080FH23 
PFAMA0A080FH23 
ProdomA0A080FH23 
UniProtKBA0A080J5D8SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KEO37219.1};
InterProA0A080J5D8 
PFAMA0A080J5D8 
ProdomA0A080J5D8 
UniProtKBA0A094NE74SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CDX06009.1};
InterProA0A094NE74 
PFAMA0A094NE74 
ProdomA0A094NE74 
UniProtKBA0A0C7MKM2SubName: Full=DNA-binding transcriptional regulator {ECO:0000313|EMBL:CEP57794.1};
InterProA0A0C7MKM2 
PFAMA0A0C7MKM2 
ProdomA0A0C7MKM2 
UniProtKBA0A0E0TVN6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEE55462.1};
InterProA0A0E0TVN6 
PFAMA0A0E0TVN6 
ProdomA0A0E0TVN6 
UniProtKBB3WN03SubName: Full=Transcriptional regulator, TetR family;
InterProB3WN03 
PFAMB3WN03 
ProdomB3WN03 
UniProtKBB3I7F3SubName: Full=Transcriptional regulator, TetR family;
InterProB3I7F3 
PFAMB3I7F3 
ProdomB3I7F3 
UniProtKBA0A017K5M4SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:EYE06209.1};
InterProA0A017K5M4 
PFAMA0A017K5M4 
ProdomA0A017K5M4 
UniProtKBC9R0I1SubName: Full=DNA-binding transcriptional regulator;SubName: Full=Transcriptional regulator, TetR family;
InterProC9R0I1 
PFAMC9R0I1 
ProdomC9R0I1 
UniProtKBA0A025G383SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EYV59297.1};
InterProA0A025G383 
PFAMA0A025G383 
ProdomA0A025G383 
UniProtKBA0A028E901SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EZE56314.1};
InterProA0A028E901 
PFAMA0A028E901 
ProdomA0A028E901 
UniProtKBA0A069XPD8SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KDU32078.1};
InterProA0A069XPD8 
PFAMA0A069XPD8 
ProdomA0A069XPD8 
UniProtKBA0A070SIP8SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KDX17957.1};
InterProA0A070SIP8 
PFAMA0A070SIP8 
ProdomA0A070SIP8 
UniProtKBA0A074HY09SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KEO00894.1};
InterProA0A074HY09 
PFAMA0A074HY09 
ProdomA0A074HY09 
UniProtKBA0A080GT44SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KEN91904.1};
InterProA0A080GT44 
PFAMA0A080GT44 
ProdomA0A080GT44 
UniProtKBA0A0E0Y3C6SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:AFS75347.1};
InterProA0A0E0Y3C6 
PFAMA0A0E0Y3C6 
ProdomA0A0E0Y3C6 
UniProtKBA0A0F6F343SubName: Full=Transcriptional regulator YbiH, TetR family {ECO:0000313|EMBL:AJA24833.1};
InterProA0A0F6F343 
PFAMA0A0F6F343 
ProdomA0A0F6F343 
UniProtKBB2PGH5SubName: Full=Transcriptional regulator, TetR family;
InterProB2PGH5 
PFAMB2PGH5 
ProdomB2PGH5 
UniProtKBC5W1P6SubName: Full=Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACT29847.1};
InterProC5W1P6 
PFAMC5W1P6 
ProdomC5W1P6 
UniProtKBB5YS87SubName: Full=Transcriptional regulator, TetR family;
InterProB5YS87 
PFAMB5YS87 
ProdomB5YS87 
UniProtKBB2PCD7SubName: Full=Transcriptional regulator, TetR family;
InterProB2PCD7 
PFAMB2PCD7 
ProdomB2PCD7 
UniProtKBA0A023YUC3SubName: Full=Transcriptional regulator YbiH, TetR family {ECO:0000313|EMBL:AHY69385.1};
InterProA0A023YUC3 
PFAMA0A023YUC3 
ProdomA0A023YUC3 
UniProtKBA0A0H3PR83SubName: Full=Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDU91595.1};
InterProA0A0H3PR83 
PFAMA0A0H3PR83 
ProdomA0A0H3PR83 
UniProtKBA0A024KR92SubName: Full=Putative transcriptional regulator {ECO:0000313|EMBL:CDP67089.1};
InterProA0A024KR92 
PFAMA0A024KR92 
ProdomA0A024KR92 
UniProtKBA0A073GWA0SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KEJ70058.1};
InterProA0A073GWA0 
PFAMA0A073GWA0 
ProdomA0A073GWA0 
UniProtKBA0A0H3X5X2SubName: Full=DNA-binding transcriptional regulator {ECO:0000313|EMBL:AKM34358.1};
InterProA0A0H3X5X2 
PFAMA0A0H3X5X2 
ProdomA0A0H3X5X2 
UniProtKBB7M769SubName: Full=Putative DNA-binding transcriptional regulator;
InterProB7M769 
PFAMB7M769 
ProdomB7M769 
UniProtKBA0A025CAL1SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EYV11831.1};
InterProA0A025CAL1 
PFAMA0A025CAL1 
ProdomA0A025CAL1 
UniProtKBA0A069X878SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KDU25366.1};
InterProA0A069X878 
PFAMA0A069X878 
ProdomA0A069X878 
UniProtKBA0A073VT82SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KEL83628.1};
InterProA0A073VT82 
PFAMA0A073VT82 
ProdomA0A073VT82 
UniProtKBA0A0E0V3I8SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:AEQ11640.1};
InterProA0A0E0V3I8 
PFAMA0A0E0V3I8 
ProdomA0A0E0V3I8 
UniProtKBB3A9N2SubName: Full=Transcriptional regulator, TetR family;
InterProB3A9N2 
PFAMB3A9N2 
ProdomB3A9N2 
UniProtKBB6ZUS6SubName: Full=Transcriptional regulator, TetR family;
InterProB6ZUS6 
PFAMB6ZUS6 
ProdomB6ZUS6 
UniProtKBA0A074ING0SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KEO14178.1};
InterProA0A074ING0 
PFAMA0A074ING0 
ProdomA0A074ING0 
UniProtKBA0A079H451SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KDY98273.1};
InterProA0A079H451 
PFAMA0A079H451 
ProdomA0A079H451 
UniProtKBA0A080ID71SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KEO27824.1};
InterProA0A080ID71 
PFAMA0A080ID71 
ProdomA0A080ID71 
UniProtKBA0A0A8U517SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CEK03878.1};
InterProA0A0A8U517 
PFAMA0A0A8U517 
ProdomA0A0A8U517 
UniProtKBA0A0E1LWV2SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:AJF55518.1};
InterProA0A0E1LWV2 
PFAMA0A0E1LWV2 
ProdomA0A0E1LWV2 
UniProtKBA0A0E2TVT8SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EZE18194.1};
InterProA0A0E2TVT8 
PFAMA0A0E2TVT8 
ProdomA0A0E2TVT8 
UniProtKBA0A0F6MAZ3SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:EID61332.1};
InterProA0A0F6MAZ3 
PFAMA0A0F6MAZ3 
ProdomA0A0F6MAZ3 
UniProtKBA0A0G3KJ43SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:AKK53328.1};
InterProA0A0G3KJ43 
PFAMA0A0G3KJ43 
ProdomA0A0G3KJ43 
UniProtKBB2NXK3SubName: Full=Transcriptional regulator, TetR family;
InterProB2NXK3 
PFAMB2NXK3 
ProdomB2NXK3 
UniProtKBB3BGU5SubName: Full=Transcriptional regulator, TetR family;
InterProB3BGU5 
PFAMB3BGU5 
ProdomB3BGU5 
UniProtKBA0A071C2F3SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KDY90206.1};
InterProA0A071C2F3 
PFAMA0A071C2F3 
ProdomA0A071C2F3 
UniProtKBA0A070UH63SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KDX41922.1};
InterProA0A070UH63 
PFAMA0A070UH63 
ProdomA0A070UH63 
UniProtKBA0A070KYD7SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KDW33458.1};
InterProA0A070KYD7 
PFAMA0A070KYD7 
ProdomA0A070KYD7 
UniProtKBB1IXH2SubName: Full=Transcriptional regulator, TetR family;
InterProB1IXH2 
PFAMB1IXH2 
ProdomB1IXH2 
UniProtKBC6EIY6SubName: Full=Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACT29847.1};
InterProC6EIY6 
PFAMC6EIY6 
ProdomC6EIY6 
UniProtKBC8TLR1SubName: Full=Predicted DNA-binding transcriptional regulator {ECO:0000313|EMBL:BAI24238.1};
InterProC8TLR1 
PFAMC8TLR1 
ProdomC8TLR1 
UniProtKBB7LC79SubName: Full=YbiH protein {ECO:0000313|EMBL:CAU96706.1};
InterProB7LC79 
PFAMB7LC79 
ProdomB7LC79 
UniProtKBA0A026HFC9SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EYY80828.1};
InterProA0A026HFC9 
PFAMA0A026HFC9 
ProdomA0A026HFC9 
UniProtKBA0A027YZE9SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EZD91592.1};
InterProA0A027YZE9 
PFAMA0A027YZE9 
ProdomA0A027YZE9 
UniProtKBA0A029KZB0SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:EZJ78623.1};
InterProA0A029KZB0 
PFAMA0A029KZB0 
ProdomA0A029KZB0 
UniProtKBA0A029PR72SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:EZK24876.1};
InterProA0A029PR72 
PFAMA0A029PR72 
ProdomA0A029PR72 
UniProtKBA0A069Z6D1SubName: Full=Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KDU55205.1};
InterProA0A069Z6D1 
PFAMA0A069Z6D1 
ProdomA0A069Z6D1 
UniProtKBB1X7C6SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProB1X7C6 
PFAMB1X7C6 
ProdomB1X7C6