University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P0ACY2
Original Database ID ref NP_416279.1
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation recname: full=putative nad(p)h
nitroreductase ydja;ec=1.-.-.-;
Sequence Length 183

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region1-183
Protein Length183
Template PDB Code3bm1A
Template Region1-183
Sequence Identity100%
E-Value0
GA3411
MPQS2.1586
z-DOPE-0.97
TSVMod MethodMSALL
TSVMod RMSD1.553
TSVMod NO350.973
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3bm1crystal structure of a minimal nitroreductase ydja from escherichia coli k12 with and without fmn cofactor
DBALI3bm1A 
JenaImageLibrary3bm1 
Target Sequence
UniProtKBB7M1H8SubName: Full=Putative oxidoreductase;
InterProB7M1H8 
PFAMB7M1H8 
ProdomB7M1H8 
UniProtKBA0A028ALC3SubName: Full=Oxidoreductase {ECO:0000313|EMBL:EZE11599.1};
InterProA0A028ALC3 
PFAMA0A028ALC3 
ProdomA0A028ALC3 
UniProtKBA0A028BB57SubName: Full=Oxidoreductase {ECO:0000313|EMBL:EZE20687.1};
InterProA0A028BB57 
PFAMA0A028BB57 
ProdomA0A028BB57 
UniProtKBA0A029LL50SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:EZJ86109.1};
InterProA0A029LL50 
PFAMA0A029LL50 
ProdomA0A029LL50 
UniProtKBA0A029MR63SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:EZJ99626.1};
InterProA0A029MR63 
PFAMA0A029MR63 
ProdomA0A029MR63 
UniProtKBA0A069X6J6SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KDU25587.1};
InterProA0A069X6J6 
PFAMA0A069X6J6 
ProdomA0A069X6J6 
UniProtKBA0A069XTJ4SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KDU30907.1};
InterProA0A069XTJ4 
PFAMA0A069XTJ4 
ProdomA0A069XTJ4 
UniProtKBA0A070EVX6SubName: Full=Oxidoreductase {ECO:0000313|EMBL:KDV56791.1};
InterProA0A070EVX6 
PFAMA0A070EVX6 
ProdomA0A070EVX6 
UniProtKBA0A070T425SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KDX20773.1};
InterProA0A070T425 
PFAMA0A070T425 
ProdomA0A070T425 
UniProtKBA0A070V499SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KDX48599.1};
InterProA0A070V499 
PFAMA0A070V499 
ProdomA0A070V499 
UniProtKBA0A070YME3SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KDX88133.1};
InterProA0A070YME3 
PFAMA0A070YME3 
ProdomA0A070YME3 
UniProtKBA0A027TW73SubName: Full=Oxidoreductase {ECO:0000313|EMBL:EZD29591.1};
InterProA0A027TW73 
PFAMA0A027TW73 
ProdomA0A027TW73 
UniProtKBA0A026UEX4SubName: Full=Oxidoreductase {ECO:0000313|EMBL:EZA28258.1};
InterProA0A026UEX4 
PFAMA0A026UEX4 
ProdomA0A026UEX4 
UniProtKBB1XGM6SubName: Full=Predicted oxidoreductase;
InterProB1XGM6 
PFAMB1XGM6 
ProdomB1XGM6 
UniProtKBB5YQ54SubName: Full=Nitroreductase family protein;
InterProB5YQ54 
PFAMB5YQ54 
ProdomB5YQ54 
UniProtKBC6UX21SubName: Full=Predicted oxidoreductase;
InterProC6UX21 
PFAMC6UX21 
ProdomC6UX21 
UniProtKBC8TST1SubName: Full=Predicted oxidoreductase {ECO:0000313|EMBL:BAI25781.1};
InterProC8TST1 
PFAMC8TST1 
ProdomC8TST1 
UniProtKBC8UA27SubName: Full=Predicted oxidoreductase {ECO:0000313|EMBL:BAI30758.1};
InterProC8UA27 
PFAMC8UA27 
ProdomC8UA27 
UniProtKBC6ECJ2SubName: Full=Nitroreductase {ECO:0000313|EMBL:ACT28926.1};
InterProC6ECJ2 
PFAMC6ECJ2 
ProdomC6ECJ2 
UniProtKBD7Y1R3SubName: Full=Nitroreductase family protein {ECO:0000313|EMBL:EFJ98382.1};
InterProD7Y1R3 
PFAMD7Y1R3 
ProdomD7Y1R3 
UniProtKBD6HXP6SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EFE62395.2};
InterProD6HXP6 
PFAMD6HXP6 
ProdomD6HXP6 
UniProtKBD7YK47SubName: Full=Nitroreductase family protein {ECO:0000313|EMBL:EFK02332.1};
InterProD7YK47 
PFAMD7YK47 
ProdomD7YK47 
UniProtKBD3QVM9SubName: Full=Protein ydjA {ECO:0000313|EMBL:ADD56778.1};
InterProD3QVM9 
PFAMD3QVM9 
ProdomD3QVM9 
UniProtKBB2N2M6SubName: Full=Nitroreductase family protein;
InterProB2N2M6 
PFAMB2N2M6 
ProdomB2N2M6 
UniProtKBA0A071C6H3SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KDZ10227.1};
InterProA0A071C6H3 
PFAMA0A071C6H3 
ProdomA0A071C6H3 
UniProtKBA0A071DAI2SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KDZ38434.1};
InterProA0A071DAI2 
PFAMA0A071DAI2 
ProdomA0A071DAI2 
UniProtKBA0A0E3H346SubName: Full=Putative NAD(P)H nitroreductase YdjA {ECO:0000313|EMBL:AKA90781.1};
InterProA0A0E3H346 
PFAMA0A0E3H346 
ProdomA0A0E3H346 
UniProtKBA0A0G2XDD2SubName: Full=Oxidoreductase {ECO:0000313|EMBL:AKI66434.1};
InterProA0A0G2XDD2 
PFAMA0A0G2XDD2 
ProdomA0A0G2XDD2 
UniProtKBA0A0G3HIG7SubName: Full=Putative oxidoreductase protein {ECO:0000313|EMBL:AKK12575.1};
InterProA0A0G3HIG7 
PFAMA0A0G3HIG7 
ProdomA0A0G3HIG7 
UniProtKBA0A0H3PM55SubName: Full=Nitroreductase family protein {ECO:0000313|EMBL:EDU90403.1};
InterProA0A0H3PM55 
PFAMA0A0H3PM55 
ProdomA0A0H3PM55 
UniProtKBA0A0H4SE22SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKP84498.1};
InterProA0A0H4SE22 
PFAMA0A0H4SE22 
ProdomA0A0H4SE22 
UniProtKBB2PNK9SubName: Full=Nitroreductase family protein;
InterProB2PNK9 
PFAMB2PNK9 
ProdomB2PNK9 
UniProtKBB3IJU6SubName: Full=Nitroreductase family protein;
InterProB3IJU6 
PFAMB3IJU6 
ProdomB3IJU6 
UniProtKBB3IB70SubName: Full=Nitroreductase family protein;
InterProB3IB70 
PFAMB3IB70 
ProdomB3IB70 
UniProtKBB3XG31SubName: Full=Nitroreductase family protein;
InterProB3XG31 
PFAMB3XG31 
ProdomB3XG31 
UniProtKBB7A1X5SubName: Full=Nitroreductase family protein;
InterProB7A1X5 
PFAMB7A1X5 
ProdomB7A1X5 
UniProtKBA0A0E2U3E0SubName: Full=Oxidoreductase {ECO:0000313|EMBL:EZE19785.1};
InterProA0A0E2U3E0 
PFAMA0A0E2U3E0 
ProdomA0A0E2U3E0 
UniProtKBA0A0E1ZPC2SubName: Full=Putative oxidoreductase {ECO:0000313|EMBL:EIL30108.1};
InterProA0A0E1ZPC2 
PFAMA0A0E1ZPC2 
ProdomA0A0E1ZPC2 
UniProtKBA0A0E1T1U7SubName: Full=Nitroreductase family protein {ECO:0000313|EMBL:EDU65116.1};
InterProA0A0E1T1U7 
PFAMA0A0E1T1U7 
ProdomA0A0E1T1U7 
UniProtKBA0A073GE01SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KEJ62520.1};
InterProA0A073GE01 
PFAMA0A073GE01 
ProdomA0A073GE01 
UniProtKBA0A073GUF5SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KEJ68794.1};
InterProA0A073GUF5 
PFAMA0A073GUF5 
ProdomA0A073GUF5 
UniProtKBA0A074IGC4SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KEO11378.1};
InterProA0A074IGC4 
PFAMA0A074IGC4 
ProdomA0A074IGC4 
UniProtKBA0A079DKC0SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KDY20907.1};
InterProA0A079DKC0 
PFAMA0A079DKC0 
ProdomA0A079DKC0 
UniProtKBA0A079FSU0SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KDY64815.1};
InterProA0A079FSU0 
PFAMA0A079FSU0 
ProdomA0A079FSU0 
UniProtKBA0A079H2W2SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KDY98936.1};
InterProA0A079H2W2 
PFAMA0A079H2W2 
ProdomA0A079H2W2 
UniProtKBA0A080FT69SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KEN69103.1};
InterProA0A080FT69 
PFAMA0A080FT69 
ProdomA0A080FT69 
UniProtKBA0A080GM40SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KEN90526.1};
InterProA0A080GM40 
PFAMA0A080GM40 
ProdomA0A080GM40 
UniProtKBA0A080J247SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KEO33895.1};
InterProA0A080J247 
PFAMA0A080J247 
ProdomA0A080J247 
UniProtKBA0A0A0FE89SubName: Full=Putative NADH dehydrogenase/NAD {ECO:0000313|EMBL:KGM61079.1};EC=1.-.-.- {ECO:0000313|EMBL:KGM61079.1};
InterProA0A0A0FE89 
PFAMA0A0A0FE89 
ProdomA0A0A0FE89 
UniProtKBB7L6N9SubName: Full=YdjA protein {ECO:0000313|EMBL:CAU97792.1};
InterProB7L6N9 
PFAMB7L6N9 
ProdomB7L6N9 
UniProtKBB6IBI6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAG77460.1};
InterProB6IBI6 
PFAMB6IBI6 
ProdomB6IBI6 
UniProtKBA8A0V8SubName: Full=Nitroreductase family protein;
InterProA8A0V8 
PFAMA8A0V8 
ProdomA8A0V8 
UniProtKBD8AV32SubName: Full=Nitroreductase family protein {ECO:0000313|EMBL:EFK12980.1};
InterProD8AV32 
PFAMD8AV32 
ProdomD8AV32 
UniProtKBA0A025G135SubName: Full=Oxidoreductase {ECO:0000313|EMBL:EYV58419.1};
InterProA0A025G135 
PFAMA0A025G135 
ProdomA0A025G135 
UniProtKBA0A028EBS8SubName: Full=Oxidoreductase {ECO:0000313|EMBL:EZE57309.1};
InterProA0A028EBS8 
PFAMA0A028EBS8 
ProdomA0A028EBS8 
UniProtKBA0A070CIQ9SubName: Full=Oxidoreductase {ECO:0000313|EMBL:KDV28671.1};
InterProA0A070CIQ9 
PFAMA0A070CIQ9 
ProdomA0A070CIQ9 
UniProtKBA0A071ALC4SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KDY61974.1};
InterProA0A071ALC4 
PFAMA0A071ALC4 
ProdomA0A071ALC4 
UniProtKBA0A074HUA0SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KEN98578.1};
InterProA0A074HUA0 
PFAMA0A074HUA0 
ProdomA0A074HUA0 
UniProtKBA0A080ELX9SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KEN48786.1};
InterProA0A080ELX9 
PFAMA0A080ELX9 
ProdomA0A080ELX9 
UniProtKBA0A0E0Y1S3SubName: Full=Putative oxidoreductase {ECO:0000313|EMBL:AFS74121.1};
InterProA0A0E0Y1S3 
PFAMA0A0E0Y1S3 
ProdomA0A0E0Y1S3 
UniProtKBA0A0F6C554SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFJ29360.1};
InterProA0A0F6C554 
PFAMA0A0F6C554 
ProdomA0A0F6C554 
UniProtKBB3BJT3SubName: Full=Nitroreductase family protein;
InterProB3BJT3 
PFAMB3BJT3 
ProdomB3BJT3 
UniProtKBC8UBL9SubName: Full=Predicted oxidoreductase {ECO:0000313|EMBL:BAI36141.1};
InterProC8UBL9 
PFAMC8UBL9 
ProdomC8UBL9 
UniProtKBC3T722SubName: Full=Nitroreductase family protein YdjA {ECO:0000313|EMBL:AJE56196.1};SubName: Full=Oxidoreductase {ECO:0000313|EMBL:AIZ87275.1};SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:000031
InterProC3T722 
PFAMC3T722 
ProdomC3T722 
UniProtKBB3B347SubName: Full=Nitroreductase family protein;
InterProB3B347 
PFAMB3B347 
ProdomB3B347 
UniProtKBA7ZMN4SubName: Full=Nitroreductase family protein {ECO:0000313|EMBL:ABV20630.1};
InterProA7ZMN4 
PFAMA7ZMN4 
ProdomA7ZMN4 
UniProtKBA0A0H9QSI4SubName: Full=Putative oxidoreductase {ECO:0000313|EMBL:CSL23254.1};EC=1.-.-.- {ECO:0000313|EMBL:CSL23254.1};
InterProA0A0H9QSI4 
PFAMA0A0H9QSI4 
ProdomA0A0H9QSI4 
UniProtKBB1IPG5SubName: Full=Nitroreductase;
InterProB1IPG5 
PFAMB1IPG5 
ProdomB1IPG5 
UniProtKBA0A073TXU0SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KEL27042.1};
InterProA0A073TXU0 
PFAMA0A073TXU0 
ProdomA0A073TXU0 
UniProtKBB3AA54SubName: Full=Nitroreductase family protein;
InterProB3AA54 
PFAMB3AA54 
ProdomB3AA54 
UniProtKBC6UJ79SubName: Full=Predicted oxidoreductase;
InterProC6UJ79 
PFAMC6UJ79 
ProdomC6UJ79 
UniProtKBA0A024KX70SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CDP69233.1};
InterProA0A024KX70 
PFAMA0A024KX70 
ProdomA0A024KX70 
UniProtKBA0A069Z7H8SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KDU54859.1};
InterProA0A069Z7H8 
PFAMA0A069Z7H8 
ProdomA0A069Z7H8 
UniProtKBA0A073VYL9SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KEL85473.1};
InterProA0A073VYL9 
PFAMA0A073VYL9 
ProdomA0A073VYL9 
UniProtKBA0A0E0TZ18SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEE56820.1};
InterProA0A0E0TZ18 
PFAMA0A0E0TZ18 
ProdomA0A0E0TZ18 
UniProtKBB3HJ12SubName: Full=Protein YdjA {ECO:0000313|EMBL:AIF60890.1};
InterProB3HJ12 
PFAMB3HJ12 
ProdomB3HJ12 
UniProtKBC4ZZC1SubName: Full=Predicted oxidoreductase;
InterProC4ZZC1 
PFAMC4ZZC1 
ProdomC4ZZC1 
UniProtKBA0A074I2K6SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KEO01066.1};
InterProA0A074I2K6 
PFAMA0A074I2K6 
ProdomA0A074I2K6 
UniProtKBA0A079F859SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KDY53182.1};
InterProA0A079F859 
PFAMA0A079F859 
ProdomA0A079F859 
UniProtKBA0A080F9K3SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KEN56697.1};
InterProA0A080F9K3 
PFAMA0A080F9K3 
ProdomA0A080F9K3 
UniProtKBA0A080ICB8SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KEO24423.1};
InterProA0A080ICB8 
PFAMA0A080ICB8 
ProdomA0A080ICB8 
UniProtKBA0A0E1LXY6SubName: Full=Putative oxidoreductase {ECO:0000313|EMBL:AJF56661.1};
InterProA0A0E1LXY6 
PFAMA0A0E1LXY6 
ProdomA0A0E1LXY6 
UniProtKBA0A0E2TQA2SubName: Full=Oxidoreductase {ECO:0000313|EMBL:EYV11205.1};
InterProA0A0E2TQA2 
PFAMA0A0E2TQA2 
ProdomA0A0E2TQA2 
UniProtKBA0A0F6F7B3SubName: Full=Protein ydjA {ECO:0000313|EMBL:AJA26303.1};
InterProA0A0F6F7B3 
PFAMA0A0F6F7B3 
ProdomA0A0F6F7B3 
UniProtKBA0A0G3K604SubName: Full=Putative oxidoreductase {ECO:0000313|EMBL:AKK48474.1};
InterProA0A0G3K604 
PFAMA0A0G3K604 
ProdomA0A0G3K604 
UniProtKBB3ATA5SubName: Full=Nitroreductase family protein;
InterProB3ATA5 
PFAMB3ATA5 
ProdomB3ATA5 
UniProtKBB3WNY5SubName: Full=Nitroreductase family protein;
InterProB3WNY5 
PFAMB3WNY5 
ProdomB3WNY5 
UniProtKBA0A073G809SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KEJ47587.1};
InterProA0A073G809 
PFAMA0A073G809 
ProdomA0A073G809 
UniProtKBA0A071C488SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KDY91662.1};
InterProA0A071C488 
PFAMA0A071C488 
ProdomA0A071C488 
UniProtKBA0A070TI40SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:KDX30017.1};
InterProA0A070TI40 
PFAMA0A070TI40 
ProdomA0A070TI40 
UniProtKBB2NRZ9SubName: Full=Nitroreductase family protein;
InterProB2NRZ9 
PFAMB2NRZ9 
ProdomB2NRZ9 
UniProtKBC9QTU3SubName: Full=Nitroreductase;SubName: Full=Protein ydjA;
InterProC9QTU3 
PFAMC9QTU3 
ProdomC9QTU3 
UniProtKBD6IB78SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EFF05709.2};
InterProD6IB78 
PFAMD6IB78 
ProdomD6IB78 
UniProtKBC5W4T8SubName: Full=Nitroreductase {ECO:0000313|EMBL:ACT28926.1};
InterProC5W4T8 
PFAMC5W4T8 
ProdomC5W4T8 
UniProtKBA0A026H9F4SubName: Full=Oxidoreductase {ECO:0000313|EMBL:EYY79592.1};
InterProA0A026H9F4 
PFAMA0A026H9F4 
ProdomA0A026H9F4 
UniProtKBA0A027YQZ3SubName: Full=Oxidoreductase {ECO:0000313|EMBL:EZD88657.1};
InterProA0A027YQZ3 
PFAMA0A027YQZ3 
ProdomA0A027YQZ3 
UniProtKBA0A029KSN7SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:EZJ76343.1};
InterProA0A029KSN7 
PFAMA0A029KSN7 
ProdomA0A029KSN7 
UniProtKBA0A029PLB8SubName: Full=Putative NAD(P)H nitroreductase ydjA {ECO:0000313|EMBL:EZK23136.1};
InterProA0A029PLB8 
PFAMA0A029PLB8 
ProdomA0A029PLB8 
UniProtKBA0A070D3F5SubName: Full=Oxidoreductase {ECO:0000313|EMBL:KDV34917.1};
InterProA0A070D3F5 
PFAMA0A070D3F5 
ProdomA0A070D3F5 
UniProtKBB2P621SubName: Full=Nitroreductase family protein;
InterProB2P621 
PFAMB2P621 
ProdomB2P621