University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A1AH86
Original Database ID ref NP_418000.1
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation subname: full=dipeptide transporter
permease protein dppb;
Sequence Length 339

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region90-324
Protein Length339
Template PDB Code3d31C
Template Region55-259
Sequence Identity14%
E-Value0
GA3410.09
MPQS0.562715
z-DOPE0.93
TSVMod MethodMTALL
TSVMod RMSD5.525
TSVMod NO350.59
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3d31modbc from methanosarcina acetivorans
DBALI3d31C 
CATH1.10.3720.10 Domain: 3d31C00 MetI-like domain (83%)
JenaImageLibrary3d31 
Target Sequence
UniProtKBC6UGS1SubName: Full=Dipeptide transporter;
InterProC6UGS1 
PFAMC6UGS1 
ProdomC6UGS1 
UniProtKBA0A070PT15SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDW80448.1};
InterProA0A070PT15 
PFAMA0A070PT15 
ProdomA0A070PT15 
UniProtKBA0A070UR95SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDX44450.1};
InterProA0A070UR95 
PFAMA0A070UR95 
ProdomA0A070UR95 
UniProtKBA0A071C0Y8SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDY90967.1};
InterProA0A071C0Y8 
PFAMA0A071C0Y8 
ProdomA0A071C0Y8 
UniProtKBA0A071CG14SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDZ17852.1};
InterProA0A071CG14 
PFAMA0A071CG14 
ProdomA0A071CG14 
UniProtKBA0A073FQK8SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEJ44058.1};
InterProA0A073FQK8 
PFAMA0A073FQK8 
ProdomA0A073FQK8 
UniProtKBA0A073GF55SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEJ63373.1};
InterProA0A073GF55 
PFAMA0A073GF55 
ProdomA0A073GF55 
UniProtKBA0A079D5T2SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDY17246.1};
InterProA0A079D5T2 
PFAMA0A079D5T2 
ProdomA0A079D5T2 
UniProtKBA0A079FHF8SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDY54189.1};
InterProA0A079FHF8 
PFAMA0A079FHF8 
ProdomA0A079FHF8 
UniProtKBA0A079HB22SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDY98372.1};
InterProA0A079HB22 
PFAMA0A079HB22 
ProdomA0A079HB22 
UniProtKBA0A079Y8E8SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEJ54875.1};
InterProA0A079Y8E8 
PFAMA0A079Y8E8 
ProdomA0A079Y8E8 
UniProtKBA0A070FKW1SubName: Full=Peptide transporter {ECO:0000313|EMBL:KDV63079.1};
InterProA0A070FKW1 
PFAMA0A070FKW1 
ProdomA0A070FKW1 
UniProtKBA0A070DI66SubName: Full=Peptide transporter {ECO:0000313|EMBL:KDV40838.1};
InterProA0A070DI66 
PFAMA0A070DI66 
ProdomA0A070DI66 
UniProtKBA1AH86SubName: Full=Dipeptide transporter permease protein DppB;
InterProA1AH86 
PFAMA1AH86 
ProdomA1AH86 
UniProtKBC3SNC7SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:CEE10149.1};EC=3.1.3.1 {ECO:0000313|EMBL:CEE10149.1};SubName: Full=Dipeptide transport syste
InterProC3SNC7 
PFAMC3SNC7 
ProdomC3SNC7 
UniProtKBD3QUX0SubName: Full=Dipeptide transport system permease protein dppB {ECO:0000313|EMBL:ADD58750.1};
InterProD3QUX0 
PFAMD3QUX0 
ProdomD3QUX0 
UniProtKBD5D3R6SubName: Full=Dipeptide ABC transporter, permease protein DppB;
InterProD5D3R6 
PFAMD5D3R6 
ProdomD5D3R6 
UniProtKBD6I1R4SubName: Full=Dipeptide transporter permease DppB {ECO:0000313|EMBL:EFE61406.2};
InterProD6I1R4 
PFAMD6I1R4 
ProdomD6I1R4 
UniProtKBD2NCE2SubName: Full=Dipeptide ABC transporter permease component;
InterProD2NCE2 
PFAMD2NCE2 
ProdomD2NCE2 
UniProtKBD7ZK61SubName: Full=Dipeptide ABC transporter, permease protein DppB {ECO:0000313|EMBL:EFJ79346.1};
InterProD7ZK61 
PFAMD7ZK61 
ProdomD7ZK61 
UniProtKBD7YF04SubName: Full=Dipeptide ABC transporter, permease protein DppB {ECO:0000313|EMBL:EFK04115.1};
InterProD7YF04 
PFAMD7YF04 
ProdomD7YF04 
UniProtKBD7ZPB4SubName: Full=Dipeptide ABC transporter, permease protein DppB {ECO:0000313|EMBL:EFK27250.1};
InterProD7ZPB4 
PFAMD7ZPB4 
ProdomD7ZPB4 
UniProtKBD7Y8Z7SubName: Full=Dipeptide ABC transporter, permease protein DppB {ECO:0000313|EMBL:EFJ95863.1};
InterProD7Y8Z7 
PFAMD7Y8Z7 
ProdomD7Y8Z7 
UniProtKBB3HMP6SubName: Full=Dipeptide ABC transporter, permease protein DppB;
InterProB3HMP6 
PFAMB3HMP6 
ProdomB3HMP6 
UniProtKBA0A0A0FGV7SubName: Full=Dipeptide transport system permease protein DppB {ECO:0000313|EMBL:KGM61730.1};
InterProA0A0A0FGV7 
PFAMA0A0A0FGV7 
ProdomA0A0A0FGV7 
UniProtKBA0A0E0U4Q7SubName: Full=Dipeptide transport system permease protein DppB {ECO:0000313|EMBL:AEE58843.1};
InterProA0A0E0U4Q7 
PFAMA0A0E0U4Q7 
ProdomA0A0E0U4Q7 
UniProtKBB3AWT6SubName: Full=Dipeptide ABC transporter, permease protein DppB;
InterProB3AWT6 
PFAMB3AWT6 
ProdomB3AWT6 
UniProtKBB2N7C4SubName: Full=Dipeptide ABC transporter, permease protein DppB;
InterProB2N7C4 
PFAMB2N7C4 
ProdomB2N7C4 
UniProtKBB1J089SubName: Full=Alkaline phosphatase;EC=3.1.3.1;
InterProB1J089 
PFAMB1J089 
ProdomB1J089 
UniProtKBA7ZT87SubName: Full=Dipeptide ABC transporter, permease protein DppB {ECO:0000313|EMBL:ABV19740.1};
InterProA7ZT87 
PFAMA7ZT87 
ProdomA7ZT87 
UniProtKBB6I3B3SubName: Full=Dipeptide ABC transporter permease component {ECO:0000313|EMBL:BAG79340.1};
InterProB6I3B3 
PFAMB6I3B3 
ProdomB6I3B3 
UniProtKBB3WPA4SubName: Full=Dipeptide ABC transporter, permease protein DppB;
InterProB3WPA4 
PFAMB3WPA4 
ProdomB3WPA4 
UniProtKBC1HSD7SubName: Full=Dipeptide ABC transporter, permease protein DppB;
InterProC1HSD7 
PFAMC1HSD7 
ProdomC1HSD7 
UniProtKBB7ULA2SubName: Full=Dipeptide transporter {ECO:0000313|EMBL:CAS11339.1};
InterProB7ULA2 
PFAMB7ULA2 
ProdomB7ULA2 
UniProtKBC2DJ95SubName: Full=Dipeptide ABC transporter, permease protein DppB;
InterProC2DJ95 
PFAMC2DJ95 
ProdomC2DJ95 
UniProtKBC5WAB5SubName: Full=Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACT27269.1};
InterProC5WAB5 
PFAMC5WAB5 
ProdomC5WAB5 
UniProtKBB2NKW7SubName: Full=Dipeptide ABC transporter, permease protein DppB;
InterProB2NKW7 
PFAMB2NKW7 
ProdomB2NKW7 
UniProtKBB2PHD8SubName: Full=Dipeptide ABC transporter, permease protein DppB;
InterProB2PHD8 
PFAMB2PHD8 
ProdomB2PHD8 
UniProtKBB1LJA2SubName: Full=Dipeptide ABC transporter, permease protein DppB {ECO:0000313|EMBL:ACB17091.1};
InterProB1LJA2 
PFAMB1LJA2 
ProdomB1LJA2 
UniProtKBA0A0E0XW52SubName: Full=Dipeptide transporter permease DppB {ECO:0000313|EMBL:AFS72166.1};
InterProA0A0E0XW52 
PFAMA0A0E0XW52 
ProdomA0A0E0XW52 
UniProtKBA0A0E1M2T8SubName: Full=Dipeptide/heme transporter {ECO:0000313|EMBL:AJF58341.1};
InterProA0A0E1M2T8 
PFAMA0A0E1M2T8 
ProdomA0A0E1M2T8 
UniProtKBA0A0E3MY42SubName: Full=Dipeptide transport system permease protein DppB {ECO:0000313|EMBL:AKA92727.1};
InterProA0A0E3MY42 
PFAMA0A0E3MY42 
ProdomA0A0E3MY42 
UniProtKBA0A0F6CAG1SubName: Full=Dipeptide transporter permease DppB {ECO:0000313|EMBL:AFJ31217.1};
InterProA0A0F6CAG1 
PFAMA0A0F6CAG1 
ProdomA0A0F6CAG1 
UniProtKBA0A0F6GU22SubName: Full=Dipeptide ABC transporter permease component {ECO:0000313|EMBL:BAI56917.1};
InterProA0A0F6GU22 
PFAMA0A0F6GU22 
ProdomA0A0F6GU22 
UniProtKBA0A0G2SGH5SubName: Full=Peptide ABC transporter permease {ECO:0000313|EMBL:AJM75750.1};
InterProA0A0G2SGH5 
PFAMA0A0G2SGH5 
ProdomA0A0G2SGH5 
UniProtKBA0A0H2Z496SubName: Full=Dipeptide transporter permease protein DppB {ECO:0000313|EMBL:ABJ03026.1};
InterProA0A0H2Z496 
PFAMA0A0H2Z496 
ProdomA0A0H2Z496 
UniProtKBA0A0H3EN61SubName: Full=Dipeptide transporter permease DppB {ECO:0000313|EMBL:ADR28930.1};
InterProA0A0H3EN61 
PFAMA0A0H3EN61 
ProdomA0A0H3EN61 
UniProtKBA0A0H3XDK0SubName: Full=Dipeptide/heme transporter {ECO:0000313|EMBL:AKM37098.1};
InterProA0A0H3XDK0 
PFAMA0A0H3XDK0 
ProdomA0A0H3XDK0 
UniProtKBA0A0H4S075SubName: Full=Dipeptide transporter permease DppB {ECO:0000313|EMBL:AKP86525.1};
InterProA0A0H4S075 
PFAMA0A0H4S075 
ProdomA0A0H4S075 
UniProtKBC6EED7SubName: Full=Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACT27269.1};
InterProC6EED7 
PFAMC6EED7 
ProdomC6EED7 
UniProtKBC4ZW90SubName: Full=Dipeptide transporter;
InterProC4ZW90 
PFAMC4ZW90 
ProdomC4ZW90 
UniProtKBA0A017JKB0SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EYD99290.1};
InterProA0A017JKB0 
PFAMA0A017JKB0 
ProdomA0A017JKB0 
UniProtKBD8A4S8SubName: Full=Dipeptide ABC transporter, permease protein DppB {ECO:0000313|EMBL:EFK21848.1};
InterProD8A4S8 
PFAMD8A4S8 
ProdomD8A4S8 
UniProtKBA0A064T690SubName: Full=Dipeptide transport system permease dppB {ECO:0000313|EMBL:KDG91378.1};
InterProA0A064T690 
PFAMA0A064T690 
ProdomA0A064T690 
UniProtKBA0A070XY24SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDX84167.1};
InterProA0A070XY24 
PFAMA0A070XY24 
ProdomA0A070XY24 
UniProtKBA0A074HLZ0SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEN96796.1};
InterProA0A074HLZ0 
PFAMA0A074HLZ0 
ProdomA0A074HLZ0 
UniProtKBA0A080FPI5SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEN64412.1};
InterProA0A080FPI5 
PFAMA0A080FPI5 
ProdomA0A080FPI5 
UniProtKBA0A0E2U0H6SubName: Full=Peptide transporter {ECO:0000313|EMBL:EYV06995.1};
InterProA0A0E2U0H6 
PFAMA0A0E2U0H6 
ProdomA0A0E2U0H6 
UniProtKBA0A0G3HRY4SubName: Full=Dipeptide/heme transporter protein {ECO:0000313|EMBL:AKK14688.1};
InterProA0A0G3HRY4 
PFAMA0A0G3HRY4 
ProdomA0A0G3HRY4 
UniProtKBA0A0J3VIE5SubName: Full=Dipeptide transport system permease DppB {ECO:0000313|EMBL:KME65642.1};
InterProA0A0J3VIE5 
PFAMA0A0J3VIE5 
ProdomA0A0J3VIE5 
UniProtKBB3H8I0SubName: Full=Dipeptide transporter permease DppB {ECO:0000313|EMBL:AIF63188.1};
InterProB3H8I0 
PFAMB3H8I0 
ProdomB3H8I0 
UniProtKBB7MEQ1SubName: Full=Dipeptide transporter membrane component of ABC superfamily {ECO:0000313|EMBL:CAR05172.1};
InterProB7MEQ1 
PFAMB7MEQ1 
ProdomB7MEQ1 
UniProtKBD6JGK6SubName: Full=Dipeptide transporter permease DppB {ECO:0000313|EMBL:EFF11117.2};
InterProD6JGK6 
PFAMD6JGK6 
ProdomD6JGK6 
UniProtKBC6UXG8SubName: Full=Dipeptide transporter membrane component of ABC superfamily;
InterProC6UXG8 
PFAMC6UXG8 
ProdomC6UXG8 
UniProtKBB7LTF4SubName: Full=Dipeptide transporter membrane component of ABC superfamily {ECO:0000313|EMBL:CAQ91013.1};
InterProB7LTF4 
PFAMB7LTF4 
ProdomB7LTF4 
UniProtKBA0A024KSG7SubName: Full=Dipeptide transport system permease protein 1 {ECO:0000313|EMBL:CDP67593.1};
InterProA0A024KSG7 
PFAMA0A024KSG7 
ProdomA0A024KSG7 
UniProtKBB6ZS65SubName: Full=Dipeptide ABC transporter, permease protein DppB;
InterProB6ZS65 
PFAMB6ZS65 
ProdomB6ZS65 
UniProtKBA0A026UXV2SubName: Full=Peptide transporter {ECO:0000313|EMBL:EZA34624.1};
InterProA0A026UXV2 
PFAMA0A026UXV2 
ProdomA0A026UXV2 
UniProtKBA0A0E1T1H9SubName: Full=Dipeptide ABC transporter, permease protein DppB {ECO:0000313|EMBL:EDU63282.1};
InterProA0A0E1T1H9 
PFAMA0A0E1T1H9 
ProdomA0A0E1T1H9 
UniProtKBB3WVL8SubName: Full=Dipeptide ABC transporter, permease protein DppB {ECO:0000313|EMBL:EDX36717.1};
InterProB3WVL8 
PFAMB3WVL8 
ProdomB3WVL8 
UniProtKBD3H102SubName: Full=Dipeptide ABC transporter, permease protein {ECO:0000313|EMBL:CBG36673.1};
InterProD3H102 
PFAMD3H102 
ProdomD3H102 
UniProtKBA0A027YVP4SubName: Full=Peptide transporter {ECO:0000313|EMBL:EZD90648.1};
InterProA0A027YVP4 
PFAMA0A027YVP4 
ProdomA0A027YVP4 
UniProtKBA0A074HGF1SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEN94635.1};
InterProA0A074HGF1 
PFAMA0A074HGF1 
ProdomA0A074HGF1 
UniProtKBA0A0E2KYZ0SubName: Full=Dipeptide transport system permease dppB {ECO:0000313|EMBL:EQX24687.1};
InterProA0A0E2KYZ0 
PFAMA0A0E2KYZ0 
ProdomA0A0E2KYZ0 
UniProtKBA0A0H9MNB6SubName: Full=Dipeptide transporter permease DppB {ECO:0000313|EMBL:CSK84499.1};
InterProA0A0H9MNB6 
PFAMA0A0H9MNB6 
ProdomA0A0H9MNB6 
UniProtKBB7NP40SubName: Full=Dipeptide transporter membrane component of ABC superfamily;
InterProB7NP40 
PFAMB7NP40 
ProdomB7NP40 
UniProtKBC8TYG8SubName: Full=Dipeptide transport system permease protein 1 {ECO:0000313|EMBL:BAI32980.1};
InterProC8TYG8 
PFAMC8TYG8 
ProdomC8TYG8 
UniProtKBA0A0E2U4X2SubName: Full=Peptide transporter {ECO:0000313|EMBL:EZE20966.1};
InterProA0A0E2U4X2 
PFAMA0A0E2U4X2 
ProdomA0A0E2U4X2 
UniProtKBA0A0F6FDU0SubName: Full=Dipeptide transport system permease protein DppB {ECO:0000313|EMBL:AJA28580.1};
InterProA0A0F6FDU0 
PFAMA0A0F6FDU0 
ProdomA0A0F6FDU0 
UniProtKBA0A0G3J7U7SubName: Full=Peptide ABC transporter permease {ECO:0000313|EMBL:AKK35146.1};
InterProA0A0G3J7U7 
PFAMA0A0G3J7U7 
ProdomA0A0G3J7U7 
UniProtKBA0A0H3MRC1SubName: Full=Dipeptide transporter membrane component of ABC superfamily {ECO:0000313|EMBL:CAR20160.1};
InterProA0A0H3MRC1 
PFAMA0A0H3MRC1 
ProdomA0A0H3MRC1 
UniProtKBB1X8F9SubName: Full=Dipeptide transporter; membrane component of ABC superfamily;
InterProB1X8F9 
PFAMB1X8F9 
ProdomB1X8F9 
UniProtKBB2U585SubName: Full=Dipeptide ABC transporter, permease protein DppB {ECO:0000313|EMBL:ACD06780.1};
InterProB2U585 
PFAMB2U585 
ProdomB2U585 
UniProtKBB3A1U2SubName: Full=Dipeptide ABC transporter, permease protein DppB;
InterProB3A1U2 
PFAMB3A1U2 
ProdomB3A1U2 
UniProtKBA8A5Z8SubName: Full=Dipeptide ABC transporter, permease protein DppB;
InterProA8A5Z8 
PFAMA8A5Z8 
ProdomA8A5Z8 
UniProtKBB7L631SubName: Full=DppB protein {ECO:0000313|EMBL:CAV00465.1};
InterProB7L631 
PFAMB7L631 
ProdomB7L631 
UniProtKBC1NFI0SubName: Full=Dipeptide ABC transporter;
InterProC1NFI0 
PFAMC1NFI0 
ProdomC1NFI0 
UniProtKBA0A0E0VB49SubName: Full=Dipeptide/heme transporter {ECO:0000313|EMBL:AEQ14802.1};
InterProA0A0E0VB49 
PFAMA0A0E0VB49 
ProdomA0A0E0VB49 
UniProtKBA0A080GR52SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEN87123.1};
InterProA0A080GR52 
PFAMA0A080GR52 
ProdomA0A080GR52 
UniProtKBA0A079FVS8SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDY62987.1};
InterProA0A079FVS8 
PFAMA0A079FVS8 
ProdomA0A079FVS8 
UniProtKBB3HZR2SubName: Full=Dipeptide ABC transporter, permease protein DppB;
InterProB3HZR2 
PFAMB3HZR2 
ProdomB3HZR2 
UniProtKBD7XIQ1SubName: Full=Dipeptide ABC transporter, permease protein DppB {ECO:0000313|EMBL:EFJ88759.1};
InterProD7XIQ1 
PFAMD7XIQ1 
ProdomD7XIQ1 
UniProtKBD7YS76SubName: Full=Dipeptide ABC transporter, permease protein DppB;
InterProD7YS76 
PFAMD7YS76 
ProdomD7YS76 
UniProtKBC9QVK3SubName: Full=Alkaline phosphatase;EC=3.1.3.1;SubName: Full=Dipeptide transport system permease protein dppB;
InterProC9QVK3 
PFAMC9QVK3 
ProdomC9QVK3 
UniProtKBA0A069Z249SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDU51280.1};
InterProA0A069Z249 
PFAMA0A069Z249 
ProdomA0A069Z249 
UniProtKBA0A070NQ22SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDW69890.1};
InterProA0A070NQ22 
PFAMA0A070NQ22 
ProdomA0A070NQ22 
UniProtKBA0A071AMI3SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDY63381.1};
InterProA0A071AMI3 
PFAMA0A071AMI3 
ProdomA0A071AMI3 
UniProtKBA0A071DA46SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDZ38299.1};
InterProA0A071DA46 
PFAMA0A071DA46 
ProdomA0A071DA46 
UniProtKBA0A074IEG9SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEO06733.1};
InterProA0A074IEG9 
PFAMA0A074IEG9 
ProdomA0A074IEG9 
UniProtKBB3IIL1SubName: Full=Dipeptide ABC transporter, permease protein DppB;
InterProB3IIL1 
PFAMB3IIL1 
ProdomB3IIL1