University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A0A0E0V2E8
Original Database ID ref NP_414988.1
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation subname: full=ybaz protein {eco:0000313|embl:aeq11270.1};
Sequence Length 129

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region31-128
Protein Length129
Template PDB Code2kifA
Template Region2-99
Sequence Identity52%
E-Value0
GA3411
MPQS1.55589
z-DOPE-1.96
TSVMod MethodMSALL
TSVMod RMSD1.516
TSVMod NO350.913
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2kifsolution nmr structure of an o6-methylguanine dna methyltransferase family protein from vibrio parahaemolyticus. northeast structural genomics consortium target vpr247.
DBALI2kifA 
JenaImageLibrary2kif 
Target Sequence
UniProtKBB7M3U7SubName: Full=Putative methylated DNA-protein cysteine alkyltransferase;
InterProB7M3U7 
PFAMB7M3U7 
ProdomB7M3U7 
UniProtKBI2I2S9SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase;
InterProI2I2S9 
PFAMI2I2S9 
ProdomI2I2S9 
UniProtKBI1BAD9SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase;
InterProI1BAD9 
PFAMI1BAD9 
ProdomI1BAD9 
UniProtKBI4PEJ7SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase;
InterProI4PEJ7 
PFAMI4PEJ7 
ProdomI4PEJ7 
UniProtKBI0ZNM3SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase;
InterProI0ZNM3 
PFAMI0ZNM3 
ProdomI0ZNM3 
UniProtKBF9CEE0SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase;
InterProF9CEE0 
PFAMF9CEE0 
ProdomF9CEE0 
UniProtKBJ9ZQ67SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase;
InterProJ9ZQ67 
PFAMJ9ZQ67 
ProdomJ9ZQ67 
UniProtKBI4RQC1SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase;
InterProI4RQC1 
PFAMI4RQC1 
ProdomI4RQC1 
UniProtKBI4R1Y7SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase;
InterProI4R1Y7 
PFAMI4R1Y7 
ProdomI4R1Y7 
UniProtKBF9HS47SubName: Full=Uncharacterized protein;
InterProF9HS47 
PFAMF9HS47 
ProdomF9HS47 
UniProtKBF4SJF3SubName: Full=Putative methyltransferase {ECO:0000313|EMBL:EGI09995.1};
InterProF4SJF3 
PFAMF4SJF3 
ProdomF4SJF3 
UniProtKBQ325E6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ABB65062.1};
InterProQ325E6 
PFAMQ325E6 
ProdomQ325E6 
UniProtKBB7N908SubName: Full=Putative methylated DNA-protein cysteine alkyltransferase {ECO:0000313|EMBL:CAR11709.1};
InterProB7N908 
PFAMB7N908 
ProdomB7N908 
UniProtKBC5W0B1SubName: Full=DNA base-flipping protein;SubName: Full=Predicted methyltransferase;
InterProC5W0B1 
PFAMC5W0B1 
ProdomC5W0B1 
UniProtKBC6V778SubName: Full=DNA base-flipping protein;SubName: Full=Predicted methyltransferase;
InterProC6V778 
PFAMC6V778 
ProdomC6V778 
UniProtKBC8U2E1SubName: Full=Predicted methyltransferase {ECO:0000313|EMBL:BAI29299.1};
InterProC8U2E1 
PFAMC8U2E1 
ProdomC8U2E1 
UniProtKBC8UIN8SubName: Full=Predicted methyltransferase {ECO:0000313|EMBL:BAI34466.1};
InterProC8UIN8 
PFAMC8UIN8 
ProdomC8UIN8 
UniProtKBD6I7G8SubName: Full=YbaZ protein {ECO:0000313|EMBL:EFF06740.2};
InterProD6I7G8 
PFAMD6I7G8 
ProdomD6I7G8 
UniProtKBE6NYM6SubName: Full=Predicted methyltransferase;
InterProE6NYM6 
PFAME6NYM6 
ProdomE6NYM6 
UniProtKBE8PUE1SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase {ECO:0000313|EMBL:AFH10192.1};SubName: Full=Predicted methyltransferase {ECO:0000313|EMBL:ADT74061.1};
InterProE8PUE1 
PFAME8PUE1 
ProdomE8PUE1 
UniProtKBK4WUP5SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase {ECO:0000313|EMBL:EJE83624.1};
InterProK4WUP5 
PFAMK4WUP5 
ProdomK4WUP5 
UniProtKBK4WK81SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase;
InterProK4WK81 
PFAMK4WK81 
ProdomK4WK81 
UniProtKBK4XXS4SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase;
InterProK4XXS4 
PFAMK4XXS4 
ProdomK4XXS4 
UniProtKBA0A0E1SSP3SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase {ECO:0000313|EMBL:EDU62553.1};EC=2.1.1.63 {ECO:0000313|EMBL:EDU62553.1};
InterProA0A0E1SSP3 
PFAMA0A0E1SSP3 
ProdomA0A0E1SSP3 
UniProtKBA0A0E2A0S3SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase {ECO:0000313|EMBL:EIL40412.1};
InterProA0A0E2A0S3 
PFAMA0A0E2A0S3 
ProdomA0A0E2A0S3 
UniProtKBA0A0E3MVF2SubName: Full=Uncharacterized protein YbaZ {ECO:0000313|EMBL:AKA89442.1};
InterProA0A0E3MVF2 
PFAMA0A0E3MVF2 
ProdomA0A0E3MVF2 
UniProtKBA0A0F6MB57SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EID61021.1};
InterProA0A0F6MB57 
PFAMA0A0F6MB57 
ProdomA0A0F6MB57 
UniProtKBA0A0H3MM10SubName: Full=Putative methylated DNA-protein cysteine alkyltransferase {ECO:0000313|EMBL:CAR16359.1};
InterProA0A0H3MM10 
PFAMA0A0H3MM10 
ProdomA0A0H3MM10 
UniProtKBA0A0H3X5T4SubName: Full=Degenerate cysteine methyltransferase-like protein {ECO:0000313|EMBL:AKM34056.1};
InterProA0A0H3X5T4 
PFAMA0A0H3X5T4 
ProdomA0A0H3X5T4 
UniProtKBA0A0I0YU67SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase {ECO:0000313|EMBL:CSP46480.1};EC=2.1.1.63 {ECO:0000313|EMBL:CSP46480.1};
InterProA0A0I0YU67 
PFAMA0A0I0YU67 
ProdomA0A0I0YU67 
UniProtKBQ0T7C8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ABF02698.1};
InterProQ0T7C8 
PFAMQ0T7C8 
ProdomQ0T7C8 
UniProtKBA0A0E1LYK0SubName: Full=Excision repair protein, alkyltransferase-like protein ATL {ECO:0000313|EMBL:AJF55219.1};
InterProA0A0E1LYK0 
PFAMA0A0E1LYK0 
ProdomA0A0E1LYK0 
UniProtKBA0A0E0Y465SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase {ECO:0000313|EMBL:AFS75714.1};
InterProA0A0E0Y465 
PFAMA0A0E0Y465 
ProdomA0A0E0Y465 
UniProtKBA0A0E0V2E8SubName: Full=YbaZ protein {ECO:0000313|EMBL:AEQ11270.1};
InterProA0A0E0V2E8 
PFAMA0A0E0V2E8 
ProdomA0A0E0V2E8 
UniProtKBK4W461SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase {ECO:0000313|EMBL:EJE75883.1};
InterProK4W461 
PFAMK4W461 
ProdomK4W461 
UniProtKBI4QHB0SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase;
InterProI4QHB0 
PFAMI4QHB0 
ProdomI4QHB0 
UniProtKBM5HGT0SubName: Full=Putative methyltransferase;
InterProM5HGT0 
PFAMM5HGT0 
ProdomM5HGT0 
UniProtKBM5IBY9SubName: Full=Putative methyltransferase;
InterProM5IBY9 
PFAMM5IBY9 
ProdomM5IBY9 
UniProtKBM5IEM3SubName: Full=Putative methyltransferase;
InterProM5IEM3 
PFAMM5IEM3 
ProdomM5IEM3 
UniProtKBB1XFP2SubName: Full=Predicted methyltransferase;
InterProB1XFP2 
PFAMB1XFP2 
ProdomB1XFP2 
UniProtKBB2N9I4SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase;EC=2.1.1.63;
InterProB2N9I4 
PFAMB2N9I4 
ProdomB2N9I4 
UniProtKBM2PXH2SubName: Full=Putative methyltransferase {ECO:0000313|EMBL:EMD14861.1};
InterProM2PXH2 
PFAMM2PXH2 
ProdomM2PXH2 
UniProtKBQ2MBX2RecName: Full=Uncharacterized protein YbaZ;
InterProQ2MBX2 
PFAMQ2MBX2 
ProdomQ2MBX2 
UniProtKBP75707RecName: Full=Uncharacterized protein YbaZ;
InterProP75707 
PFAMP75707 
ProdomP75707 
UniProtKBG4PX61SubName: Full=YbaZ protein;
InterProG4PX61 
PFAMG4PX61 
ProdomG4PX61 
UniProtKBI4QEX5SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase;
InterProI4QEX5 
PFAMI4QEX5 
ProdomI4QEX5 
UniProtKBK4VM06SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase;
InterProK4VM06 
PFAMK4VM06 
ProdomK4VM06 
UniProtKBK4XXU2SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase;
InterProK4XXU2 
PFAMK4XXU2 
ProdomK4XXU2 
UniProtKBA7ZXB2SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase;EC=2.1.1.63;
InterProA7ZXB2 
PFAMA7ZXB2 
ProdomA7ZXB2 
UniProtKBB2U4Q9SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase {ECO:0000313|EMBL:ACD07011.1};EC=2.1.1.63 {ECO:0000313|EMBL:ACD07011.1};
InterProB2U4Q9 
PFAMB2U4Q9 
ProdomB2U4Q9 
UniProtKBB7LMC4SubName: Full=Putative methylated DNA-protein cysteine alkyltransferase {ECO:0000313|EMBL:CAQ90057.1};
InterProB7LMC4 
PFAMB7LMC4 
ProdomB7LMC4 
UniProtKBM2N9K6SubName: Full=Putative methyltransferase;
InterProM2N9K6 
PFAMM2N9K6 
ProdomM2N9K6 
UniProtKBC8TJ47SubName: Full=Predicted methyltransferase {ECO:0000313|EMBL:BAI23828.1};
InterProC8TJ47 
PFAMC8TJ47 
ProdomC8TJ47 
UniProtKBQ3Z4U4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AAZ87218.1};
InterProQ3Z4U4 
PFAMQ3Z4U4 
ProdomQ3Z4U4 
UniProtKBI0VA55SubName: Full=Uncharacterized protein;
InterProI0VA55 
PFAMI0VA55 
ProdomI0VA55 
UniProtKBC6UBS0SubName: Full=Predicted methyltransferase;
InterProC6UBS0 
PFAMC6UBS0 
ProdomC6UBS0 
UniProtKBC4ZTL1SubName: Full=Predicted methyltransferase;
InterProC4ZTL1 
PFAMC4ZTL1 
ProdomC4ZTL1 
UniProtKBH0QBE4SubName: Full=Predicted methyltransferase;
InterProH0QBE4 
PFAMH0QBE4 
ProdomH0QBE4 
UniProtKBB7NJ40SubName: Full=Putative methylated DNA-protein cysteine alkyltransferase;
InterProB7NJ40 
PFAMB7NJ40 
ProdomB7NJ40 
UniProtKBG2F2X4SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase;
InterProG2F2X4 
PFAMG2F2X4 
ProdomG2F2X4 
UniProtKBA7ZIL2SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase {ECO:0000313|EMBL:ABV19120.1};EC=2.1.1.63 {ECO:0000313|EMBL:ABV19120.1};
InterProA7ZIL2 
PFAMA7ZIL2 
ProdomA7ZIL2 
UniProtKBD2A8L3SubName: Full=Predicted methyltransferase {ECO:0000313|EMBL:ADA72779.1};
InterProD2A8L3 
PFAMD2A8L3 
ProdomD2A8L3 
UniProtKBH9UPA6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFG39349.1};
InterProH9UPA6 
PFAMH9UPA6 
ProdomH9UPA6 
UniProtKBK0BHS9SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase;
InterProK0BHS9 
PFAMK0BHS9 
ProdomK0BHS9 
UniProtKBN6WE34SubName: Full=Putative methyltransferase;
InterProN6WE34 
PFAMN6WE34 
ProdomN6WE34 
UniProtKBP77119RecName: Full=Uncharacterized protein YbaZ;
InterProP77119 
PFAMP77119 
ProdomP77119 
UniProtKBD6HSY6SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EFE64468.2};
InterProD6HSY6 
PFAMD6HSY6 
ProdomD6HSY6 
UniProtKBE3PFS0SubName: Full=Putative DNA binding protein {ECO:0000313|EMBL:CBJ00011.1};
InterProE3PFS0 
PFAME3PFS0 
ProdomE3PFS0 
UniProtKBB7L692SubName: Full=YbaZ protein {ECO:0000313|EMBL:CAU96341.1};
InterProB7L692 
PFAMB7L692 
ProdomB7L692 
UniProtKBP0AFP3RecName: Full=Uncharacterized protein YbaZ;
InterProP0AFP3 
PFAMP0AFP3 
ProdomP0AFP3 
UniProtKBP0AFP2RecName: Full=Uncharacterized protein YbaZ;
InterProP0AFP2 
PFAMP0AFP2 
ProdomP0AFP2 
UniProtKBF4VAP2SubName: Full=Putative methyltransferase {ECO:0000313|EMBL:EGI47468.1};
InterProF4VAP2 
PFAMF4VAP2 
ProdomF4VAP2 
UniProtKBK0ARA6SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase;
InterProK0ARA6 
PFAMK0ARA6 
ProdomK0ARA6 
UniProtKBF8YD21SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase;
InterProF8YD21 
PFAMF8YD21 
ProdomF8YD21 
UniProtKBK4X7E9SubName: Full=Putative methyltransferase;
InterProK4X7E9 
PFAMK4X7E9 
ProdomK4X7E9 
UniProtKBK4WZE2SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase;
InterProK4WZE2 
PFAMK4WZE2 
ProdomK4WZE2 
UniProtKBE7T468SubName: Full=Methylated-DNA--protein-cysteine methyltransferase-related protein {ECO:0000313|EMBL:EFW53236.1};
InterProE7T468 
PFAME7T468 
ProdomE7T468 
UniProtKBI4RUS7SubName: Full=Putative methyltransferase;
InterProI4RUS7 
PFAMI4RUS7 
ProdomI4RUS7 
UniProtKBH4FES9SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase;
InterProH4FES9 
PFAMH4FES9 
ProdomH4FES9 
UniProtKBI4P2V5SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase;
InterProI4P2V5 
PFAMI4P2V5 
ProdomI4P2V5 
UniProtKBI4PBD3SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase;
InterProI4PBD3 
PFAMI4PBD3 
ProdomI4PBD3 
UniProtKBB7NJ40SubName: Full=Putative methylated DNA-protein cysteine alkyltransferase;
InterProB7NJ40 
PFAMB7NJ40 
ProdomB7NJ40 
UniProtKBE8PUE1SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase;SubName: Full=Predicted methyltransferase;
InterProE8PUE1 
PFAME8PUE1 
ProdomE8PUE1 
UniProtKBE7T468SubName: Full=Methylated-DNA--protein-cysteine methyltransferase-related protein;
InterProE7T468 
PFAME7T468 
ProdomE7T468 
UniProtKBA0A1X3IB30SubName: Full=Putative methyltransferase {ECO:0000313|EMBL:OSK32138.1}
InterProA0A1X3IB30 
PFAMA0A1X3IB30 
ProdomA0A1X3IB30 
UniProtKBA0A1X3J6I8SubName: Full=Putative methyltransferase {ECO:0000313|EMBL:OSK98169.1}
InterProA0A1X3J6I8 
PFAMA0A1X3J6I8 
ProdomA0A1X3J6I8 
UniProtKBA0A1X3JLL0SubName: Full=Putative methyltransferase {ECO:0000313|EMBL:OSL16287.1}
InterProA0A1X3JLL0 
PFAMA0A1X3JLL0 
ProdomA0A1X3JLL0 
UniProtKBA0A1X3L7R5SubName: Full=Putative methyltransferase {ECO:0000313|EMBL:OSL66140.1}
InterProA0A1X3L7R5 
PFAMA0A1X3L7R5 
ProdomA0A1X3L7R5 
UniProtKBA0A2S7SN30SubName: Full=Methylated-DNA--[protein]-cysteine S-methyltransferase {ECO:0000313|EMBL:PQJ02908.1}
InterProA0A2S7SN30 
PFAMA0A2S7SN30 
ProdomA0A2S7SN30 
UniProtKBC8TJ47SubName: Full=Predicted methyltransferase;
InterProC8TJ47 
PFAMC8TJ47 
ProdomC8TJ47 
UniProtKBA0A2U8Y7Y2SubName: Full=Methylated-DNA--[protein]-cysteine S-methyltransferase {ECO:0000313|EMBL:AWN76475.1}
InterProA0A2U8Y7Y2 
PFAMA0A2U8Y7Y2 
ProdomA0A2U8Y7Y2 
UniProtKBC8U2E1SubName: Full=Predicted methyltransferase;
InterProC8U2E1 
PFAMC8U2E1 
ProdomC8U2E1 
UniProtKBE3PFS0SubName: Full=Putative DNA binding protein;
InterProE3PFS0 
PFAME3PFS0 
ProdomE3PFS0 
UniProtKBE6NYM6SubName: Full=Predicted methyltransferase;
InterProE6NYM6 
PFAME6NYM6 
ProdomE6NYM6 
UniProtKBD6HSY6SubName: Full=Putative uncharacterized protein;
InterProD6HSY6 
PFAMD6HSY6 
ProdomD6HSY6 
UniProtKBD6I7G8SubName: Full=YbaZ protein;
InterProD6I7G8 
PFAMD6I7G8 
ProdomD6I7G8 
UniProtKBD2A8L3SubName: Full=Predicted methyltransferase;
InterProD2A8L3 
PFAMD2A8L3 
ProdomD2A8L3 
UniProtKBC5W0B1SubName: Full=DNA base-flipping protein;SubName: Full=Predicted methyltransferase;
InterProC5W0B1 
PFAMC5W0B1 
ProdomC5W0B1 
UniProtKBC6V778SubName: Full=DNA base-flipping protein;SubName: Full=Predicted methyltransferase;
InterProC6V778 
PFAMC6V778 
ProdomC6V778 
UniProtKBC4ZTL1SubName: Full=Predicted methyltransferase;
InterProC4ZTL1 
PFAMC4ZTL1 
ProdomC4ZTL1