University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A0A025GEI0
Original Database ID ref NP_415827.1
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation subname: full=sugar abc transporter
permease {eco:0000313|embl:eyv61971.1};
Sequence Length 293

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region55-260
Protein Length293
Template PDB Code4tquN
Template Region59-240
Sequence Identity33%
E-Value7.8e-8
GA3410.42
MPQS0.833272
z-DOPE0.87
TSVMod MethodMSALL
TSVMod RMSD12.243
TSVMod NO350.274
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4tqu
DBALI4tquN 
JenaImageLibrary4tqu 
Target Sequence
UniProtKBF3V205SubName: Full=Binding-protein-dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EGJ02861.1};
InterProF3V205 
PFAMF3V205 
ProdomF3V205 
UniProtKBA0A062Y6P7SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDA58753.1};
InterProA0A062Y6P7 
PFAMA0A062Y6P7 
ProdomA0A062Y6P7 
UniProtKBA0A069XL11SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDU30634.1};
InterProA0A069XL11 
PFAMA0A069XL11 
ProdomA0A069XL11 
UniProtKBA0A070DQ90SubName: Full=Sugar ABC transporter permease {ECO:0000313|EMBL:KDV42955.1};
InterProA0A070DQ90 
PFAMA0A070DQ90 
ProdomA0A070DQ90 
UniProtKBA0A070FK54SubName: Full=Sugar ABC transporter permease {ECO:0000313|EMBL:KDV65126.1};
InterProA0A070FK54 
PFAMA0A070FK54 
ProdomA0A070FK54 
UniProtKBA0A070UYA6SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDX47266.1};
InterProA0A070UYA6 
PFAMA0A070UYA6 
ProdomA0A070UYA6 
UniProtKBA0A070Y7C4SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDX87512.1};
InterProA0A070Y7C4 
PFAMA0A070Y7C4 
ProdomA0A070Y7C4 
UniProtKBA0A071DCI4SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDZ38887.1};
InterProA0A071DCI4 
PFAMA0A071DCI4 
ProdomA0A071DCI4 
UniProtKBA0A073FYJ9SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEJ49087.1};
InterProA0A073FYJ9 
PFAMA0A073FYJ9 
ProdomA0A073FYJ9 
UniProtKBA0A073GW24SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEJ69364.1};
InterProA0A073GW24 
PFAMA0A073GW24 
ProdomA0A073GW24 
UniProtKBA0A073TC90SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEL25151.1};
InterProA0A073TC90 
PFAMA0A073TC90 
ProdomA0A073TC90 
UniProtKBA0A029MVX2SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EZK01864.1};
InterProA0A029MVX2 
PFAMA0A029MVX2 
ProdomA0A029MVX2 
UniProtKBA0A029KWE9SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EZJ77444.1};
InterProA0A029KWE9 
PFAMA0A029KWE9 
ProdomA0A029KWE9 
UniProtKBA7ZLD9SubName: Full=Putative sugar ABC transporter, permease protein {ECO:0000313|EMBL:ABV20517.1};
InterProA7ZLD9 
PFAMA7ZLD9 
ProdomA7ZLD9 
UniProtKBE7UM93SubName: Full=Inner membrane ABC transporter permease protein YcjO;
InterProE7UM93 
PFAME7UM93 
ProdomE7UM93 
UniProtKBF4VBZ9SubName: Full=Inner membrane ABC transporter permease protein YcjO {ECO:0000313|EMBL:EGI47086.1};
InterProF4VBZ9 
PFAMF4VBZ9 
ProdomF4VBZ9 
UniProtKBF5MCD4SubName: Full=Inner membrane ABC transporter permease protein YcjO;
InterProF5MCD4 
PFAMF5MCD4 
ProdomF5MCD4 
UniProtKBF5MLF2SubName: Full=Binding-protein-dependent transport system inner membrane component family protein;
InterProF5MLF2 
PFAMF5MLF2 
ProdomF5MLF2 
UniProtKBF4SXM3SubName: Full=Inner membrane ABC transporter permease protein YcjO {ECO:0000313|EMBL:EGI17519.1};
InterProF4SXM3 
PFAMF4SXM3 
ProdomF4SXM3 
UniProtKBF8YF60SubName: Full=Putative sugar transporter subunit;
InterProF8YF60 
PFAMF8YF60 
ProdomF8YF60 
UniProtKBF5PQ66SubName: Full=Binding-protein-dependent transport system inner membrane component family protein;
InterProF5PQ66 
PFAMF5PQ66 
ProdomF5PQ66 
UniProtKBF9I4G5SubName: Full=Inner membrane ABC transporter permease ycjO;SubName: Full=Uncharacterized protein;
InterProF9I4G5 
PFAMF9I4G5 
ProdomF9I4G5 
UniProtKBF5PA77SubName: Full=Binding-protein-dependent transport system inner membrane component family protein;
InterProF5PA77 
PFAMF5PA77 
ProdomF5PA77 
UniProtKBC8TR10SubName: Full=Predicted sugar transporter subunit {ECO:0000313|EMBL:BAI25160.1};
InterProC8TR10 
PFAMC8TR10 
ProdomC8TR10 
UniProtKBA0A079DD81SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDY18462.1};
InterProA0A079DD81 
PFAMA0A079DD81 
ProdomA0A079DD81 
UniProtKBA0A079F840SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDY54080.1};
InterProA0A079F840 
PFAMA0A079F840 
ProdomA0A079F840 
UniProtKBB7LYH7SubName: Full=Putative sugar transporter subunit: permease component of ABC superfamily transporter;
InterProB7LYH7 
PFAMB7LYH7 
ProdomB7LYH7 
UniProtKBB3HP61SubName: Full=Putative sugar ABC transporter, permease protein;
InterProB3HP61 
PFAMB3HP61 
ProdomB3HP61 
UniProtKBB3H897SubName: Full=Putative sugar transporter subunit {ECO:0000313|EMBL:AIF60395.1};
InterProB3H897 
PFAMB3H897 
ProdomB3H897 
UniProtKBB1LGB7SubName: Full=Putative sugar ABC transporter, permease protein {ECO:0000313|EMBL:ACB18650.1};
InterProB1LGB7 
PFAMB1LGB7 
ProdomB1LGB7 
UniProtKBD6HW77SubName: Full=Inner membrane ABC transporter permease YcjO {ECO:0000313|EMBL:EFE63914.2};
InterProD6HW77 
PFAMD6HW77 
ProdomD6HW77 
UniProtKBD2ADV2SubName: Full=Inner membrane ABC transporter permease protein ycjO {ECO:0000313|EMBL:ADA73721.1};
InterProD2ADV2 
PFAMD2ADV2 
ProdomD2ADV2 
UniProtKBE7IBI6SubName: Full=Binding-protein-dependent transport system inner membrane component family protein;
InterProE7IBI6 
PFAME7IBI6 
ProdomE7IBI6 
UniProtKBE7HJN4SubName: Full=Binding--dependent transport system inner membrane component family protein;
InterProE7HJN4 
PFAME7HJN4 
ProdomE7HJN4 
UniProtKBE7JX69SubName: Full=Binding--dependent transport system inner membrane component family protein;
InterProE7JX69 
PFAME7JX69 
ProdomE7JX69 
UniProtKBE9X4D8SubName: Full=Inner membrane transport system;
InterProE9X4D8 
PFAME9X4D8 
ProdomE9X4D8 
UniProtKBB3IEE6SubName: Full=Putative sugar ABC transporter, permease protein;
InterProB3IEE6 
PFAMB3IEE6 
ProdomB3IEE6 
UniProtKBA0A0J3VGD4SubName: Full=Inner membrane ABC transporter permease YcjO {ECO:0000313|EMBL:KME64481.1};
InterProA0A0J3VGD4 
PFAMA0A0J3VGD4 
ProdomA0A0J3VGD4 
UniProtKBA0A0I0HKX2SubName: Full=Inner membrane ABC transporter permease protein ycjO {ECO:0000313|EMBL:CSN27984.1};
InterProA0A0I0HKX2 
PFAMA0A0I0HKX2 
ProdomA0A0I0HKX2 
UniProtKBA0A079YB78SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEJ59899.1};
InterProA0A079YB78 
PFAMA0A079YB78 
ProdomA0A079YB78 
UniProtKBA0A080EKN5SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEN49707.1};
InterProA0A080EKN5 
PFAMA0A080EKN5 
ProdomA0A080EKN5 
UniProtKBA0A094NFQ2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CDX06630.1};
InterProA0A094NFQ2 
PFAMA0A094NFQ2 
ProdomA0A094NFQ2 
UniProtKBA0A0A0F9K6SubName: Full=Inner membrane ABC transporter permease protein YcjO {ECO:0000313|EMBL:KGM59053.1};
InterProA0A0A0F9K6 
PFAMA0A0A0F9K6 
ProdomA0A0A0F9K6 
UniProtKBA0A0C7MVL7SubName: Full=Inner membrane ABC transporter permease protein ycjO {ECO:0000313|EMBL:CEP58517.1};
InterProA0A0C7MVL7 
PFAMA0A0C7MVL7 
ProdomA0A0C7MVL7 
UniProtKBA0A0E0TYQ1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEE56244.1};
InterProA0A0E0TYQ1 
PFAMA0A0E0TYQ1 
ProdomA0A0E0TYQ1 
UniProtKBA0A0E2A0H4SubName: Full=Putative sugar transporter subunit {ECO:0000313|EMBL:EIL40299.1};
InterProA0A0E2A0H4 
PFAMA0A0E2A0H4 
ProdomA0A0E2A0H4 
UniProtKBA0A0E3N0E0SubName: Full=Inner membrane ABC transporter permease protein YcjO {ECO:0000313|EMBL:AKA90385.1};
InterProA0A0E3N0E0 
PFAMA0A0E3N0E0 
ProdomA0A0E3N0E0 
UniProtKBA0A0F6GN37SubName: Full=Putative ABC transporter permease component {ECO:0000313|EMBL:BAI54832.1};
InterProA0A0F6GN37 
PFAMA0A0F6GN37 
ProdomA0A0F6GN37 
UniProtKBA0A0F6MCE2SubName: Full=Putative binding-protein dependent transport protein {ECO:0000313|EMBL:EID61827.1};
InterProA0A0F6MCE2 
PFAMA0A0F6MCE2 
ProdomA0A0F6MCE2 
UniProtKBE9XLT5SubName: Full=Inner membrane transport system {ECO:0000313|EMBL:EGB72141.1};
InterProE9XLT5 
PFAME9XLT5 
ProdomE9XLT5 
UniProtKBE9W4W0SubName: Full=Inner membrane transport system;
InterProE9W4W0 
PFAME9W4W0 
ProdomE9W4W0 
UniProtKBA0A025GEI0SubName: Full=Sugar ABC transporter permease {ECO:0000313|EMBL:EYV61971.1};
InterProA0A025GEI0 
PFAMA0A025GEI0 
ProdomA0A025GEI0 
UniProtKBG0DAB2SubName: Full=ABC transporter permease protein;
InterProG0DAB2 
PFAMG0DAB2 
ProdomG0DAB2 
UniProtKBA0A028C3C2SubName: Full=Sugar ABC transporter permease {ECO:0000313|EMBL:EZE29829.1};
InterProA0A028C3C2 
PFAMA0A028C3C2 
ProdomA0A028C3C2 
UniProtKBA0A069Z0Z1SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDU52582.1};
InterProA0A069Z0Z1 
PFAMA0A069Z0Z1 
ProdomA0A069Z0Z1 
UniProtKBA0A071BV23SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDY86480.1};
InterProA0A071BV23 
PFAMA0A071BV23 
ProdomA0A071BV23 
UniProtKBA0A074HXP4SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEN99883.1};
InterProA0A074HXP4 
PFAMA0A074HXP4 
ProdomA0A074HXP4 
UniProtKBA0A080GTP9SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEN91170.1};
InterProA0A080GTP9 
PFAMA0A080GTP9 
ProdomA0A080GTP9 
UniProtKBA0A0E0Y017SubName: Full=Putative sugar transporter subunit {ECO:0000313|EMBL:AFS74640.1};
InterProA0A0E0Y017 
PFAMA0A0E0Y017 
ProdomA0A0E0Y017 
UniProtKBA0A0H3EH13SubName: Full=Putative sugar transporter subunit {ECO:0000313|EMBL:ADR26774.1};
InterProA0A0H3EH13 
PFAMA0A0H3EH13 
ProdomA0A0H3EH13 
UniProtKBC4ZV60SubName: Full=Predicted sugar transporter subunit: membrane component of ABC superfamily;
InterProC4ZV60 
PFAMC4ZV60 
ProdomC4ZV60 
UniProtKBE3PL71SubName: Full=Predicted sugar transporter subunit: membrane component of ABC superfamily {ECO:0000313|EMBL:CBJ00918.1};
InterProE3PL71 
PFAME3PL71 
ProdomE3PL71 
UniProtKBF5NFV0SubName: Full=Binding-protein-dependent transport system inner membrane component family protein;
InterProF5NFV0 
PFAMF5NFV0 
ProdomF5NFV0 
UniProtKBF4M4T7SubName: Full=Putative uncharacterized protein;
InterProF4M4T7 
PFAMF4M4T7 
ProdomF4M4T7 
UniProtKBE2QLS0SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:CEE05792.1};SubName: Full=Inner membrane ABC transporter permease {ECO:0000313|EMBL:AJE55668
InterProE2QLS0 
PFAME2QLS0 
ProdomE2QLS0 
UniProtKBA0A026HJ39SubName: Full=Sugar ABC transporter permease {ECO:0000313|EMBL:EYY82957.1};
InterProA0A026HJ39 
PFAMA0A026HJ39 
ProdomA0A026HJ39 
UniProtKBD8BVG5SubName: Full=ABC transporter, permease protein {ECO:0000313|EMBL:EFI89376.1};
InterProD8BVG5 
PFAMD8BVG5 
ProdomD8BVG5 
UniProtKBA0A027TS59SubName: Full=Sugar ABC transporter permease {ECO:0000313|EMBL:EZD27897.1};
InterProA0A027TS59 
PFAMA0A027TS59 
ProdomA0A027TS59 
UniProtKBA0A080FBQ5SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEN57615.1};
InterProA0A080FBQ5 
PFAMA0A080FBQ5 
ProdomA0A080FBQ5 
UniProtKBD2NI58SubName: Full=Putative ABC transporter permease component;
InterProD2NI58 
PFAMD2NI58 
ProdomD2NI58 
UniProtKBF4TDL5SubName: Full=Inner membrane ABC transporter permease protein YcjO {ECO:0000313|EMBL:EGI22695.1};
InterProF4TDL5 
PFAMF4TDL5 
ProdomF4TDL5 
UniProtKBA0A028ABZ6SubName: Full=Sugar ABC transporter permease {ECO:0000313|EMBL:EZE08776.1};
InterProA0A028ABZ6 
PFAMA0A028ABZ6 
ProdomA0A028ABZ6 
UniProtKBA0A071ALD5SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDY62892.1};
InterProA0A071ALD5 
PFAMA0A071ALD5 
ProdomA0A071ALD5 
UniProtKBA0A080FY25SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEN70951.1};
InterProA0A080FY25 
PFAMA0A080FY25 
ProdomA0A080FY25 
UniProtKBA0A0G3HJJ6SubName: Full=Putative sugar transporter subunit: membrane component of ABC superfamily protein {ECO:0000313|EMBL:AKK12935.1};
InterProA0A0G3HJJ6 
PFAMA0A0G3HJJ6 
ProdomA0A0G3HJJ6 
UniProtKBE4P462SubName: Full=Putative sugar transporter subunit;
InterProE4P462 
PFAME4P462 
ProdomE4P462 
UniProtKBF4NGG6SubName: Full=ABC transporter, permease protein {ECO:0000313|EMBL:EGJ05188.1};
InterProF4NGG6 
PFAMF4NGG6 
ProdomF4NGG6 
UniProtKBA0A080IGL7SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEO26123.1};
InterProA0A080IGL7 
PFAMA0A080IGL7 
ProdomA0A080IGL7 
UniProtKBA0A0A8U770SubName: Full=Putative sugar transporter subunit: permease component of ABC superfamily transporter {ECO:0000313|EMBL:CEK04583.1};
InterProA0A0A8U770 
PFAMA0A0A8U770 
ProdomA0A0A8U770 
UniProtKBA0A0E1M1C1SubName: Full=Inner membrane putative ABC superfamily sugar transporter permease {ECO:0000313|EMBL:AJF56184.1};
InterProA0A0E1M1C1 
PFAMA0A0E1M1C1 
ProdomA0A0E1M1C1 
UniProtKBA0A0F6EBX8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AIL40349.1};
InterProA0A0F6EBX8 
PFAMA0A0F6EBX8 
ProdomA0A0F6EBX8 
UniProtKBA0A0H4RST6SubName: Full=Binding-protein dependent transport protein {ECO:0000313|EMBL:AKP84050.1};
InterProA0A0H4RST6 
PFAMA0A0H4RST6 
ProdomA0A0H4RST6 
UniProtKBB6IA26SubName: Full=Putative ABC transporter permease component {ECO:0000313|EMBL:BAG76887.1};
InterProB6IA26 
PFAMB6IA26 
ProdomB6IA26 
UniProtKBB7L575SubName: Full=YcjO protein {ECO:0000313|EMBL:CAU97331.1};
InterProB7L575 
PFAMB7L575 
ProdomB7L575 
UniProtKBB1XCE0SubName: Full=Predicted sugar transporter subunit: membrane component of ABC superfamily;
InterProB1XCE0 
PFAMB1XCE0 
ProdomB1XCE0 
UniProtKBE0QYR2SubName: Full=Putative sugar transporter subunit;
InterProE0QYR2 
PFAME0QYR2 
ProdomE0QYR2 
UniProtKBE7J243SubName: Full=Binding-protein-dependent transport system inner membrane component family protein;
InterProE7J243 
PFAME7J243 
ProdomE7J243 
UniProtKBA0A079GVT3SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDY94360.1};
InterProA0A079GVT3 
PFAMA0A079GVT3 
ProdomA0A079GVT3 
UniProtKBA0A074I5U7SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEO02206.1};
InterProA0A074I5U7 
PFAMA0A074I5U7 
ProdomA0A074I5U7 
UniProtKBA0A073GG09SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEJ63550.1};
InterProA0A073GG09 
PFAMA0A073GG09 
ProdomA0A073GG09 
UniProtKBC8UPB0SubName: Full=Predicted sugar transporter subunit {ECO:0000313|EMBL:BAI35610.1};
InterProC8UPB0 
PFAMC8UPB0 
ProdomC8UPB0 
UniProtKBF5NTS3SubName: Full=Binding-protein-dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EGK38873.1};
InterProF5NTS3 
PFAMF5NTS3 
ProdomF5NTS3 
UniProtKBF5Q422SubName: Full=Binding-protein-dependent transport system inner membrane component family protein;
InterProF5Q422 
PFAMF5Q422 
ProdomF5Q422 
UniProtKBF4SHL8SubName: Full=Inner membrane ABC transporter permease protein YcjO {ECO:0000313|EMBL:EGI10896.1};
InterProF4SHL8 
PFAMF4SHL8 
ProdomF4SHL8 
UniProtKBA0A028E555SubName: Full=Sugar ABC transporter permease {ECO:0000313|EMBL:EZE55048.1};
InterProA0A028E555 
PFAMA0A028E555 
ProdomA0A028E555 
UniProtKBA0A029PP62SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EZK23735.1};
InterProA0A029PP62 
PFAMA0A029PP62 
ProdomA0A029PP62 
UniProtKBA0A070DCB8SubName: Full=Sugar ABC transporter permease {ECO:0000313|EMBL:KDV38105.1};
InterProA0A070DCB8 
PFAMA0A070DCB8 
ProdomA0A070DCB8 
UniProtKBA0A070T0H6SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDX19543.1};
InterProA0A070T0H6 
PFAMA0A070T0H6 
ProdomA0A070T0H6 
UniProtKBA0A071CCD7SubName: Full=Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDZ15377.1};
InterProA0A071CCD7 
PFAMA0A071CCD7 
ProdomA0A071CCD7 
UniProtKBC9QX41SubName: Full=Binding-protein-dependent transport systems inner membrane component;SubName: Full=Putative sugar transporter subunit, membrane component of ABC superfamily;Flags: Precursor;
InterProC9QX41 
PFAMC9QX41 
ProdomC9QX41