University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P0CF59.1
Original Database ID ref NP_414895.1
Organism Escherichia coli, Klebsiella oxytoca, etc.
Annotation insd7_ecoli recname: full=transposase
insd for insertion element is2
on f plasmi d
Sequence Length 301

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region121-292
Protein Length301
Template PDB Code3k9jA
Template Region472-667
Sequence Identity16%
E-Value0
GA3410.94
MPQS0.827229
z-DOPE-0.6
TSVMod MethodMSALL
TSVMod RMSD4.468
TSVMod NO350.681
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3k9jtransposase domain of metnase
DBALI3k9jA 
JenaImageLibrary3k9j 
Target Sequence
UniProtKBE9XVC0SubName: Full=Integrase core domain-containing protein {ECO:0000313|EMBL:EGB69242.1};
InterProE9XVC0 
PFAME9XVC0 
ProdomE9XVC0 
UniProtKBA0A0E1SU65SubName: Full=IS2, transposase orfB {ECO:0000313|EMBL:EDU63110.1};
InterProA0A0E1SU65 
PFAMA0A0E1SU65 
ProdomA0A0E1SU65 
UniProtKBA0A0E9FSZ9SubName: Full=IS2 transposase TnpB {ECO:0000313|EMBL:CRH85837.1};
InterProA0A0E9FSZ9 
PFAMA0A0E9FSZ9 
ProdomA0A0E9FSZ9 
UniProtKBA0A0G3HI02SubName: Full=IS2 transposase TnpB protein {ECO:0000313|EMBL:AKK12400.1};
InterProA0A0G3HI02 
PFAMA0A0G3HI02 
ProdomA0A0G3HI02 
UniProtKBA0A0G3KLD9SubName: Full=Integrase {ECO:0000313|EMBL:AKK53407.1};
InterProA0A0G3KLD9 
PFAMA0A0G3KLD9 
ProdomA0A0G3KLD9 
UniProtKBA0A0H4RVD2SubName: Full=IS2 transposase {ECO:0000313|EMBL:AKP84209.1};
InterProA0A0H4RVD2 
PFAMA0A0H4RVD2 
ProdomA0A0H4RVD2 
UniProtKBA0A0H9CXR3SubName: Full=Insertion element IS2 transposase InsD {ECO:0000313|EMBL:CSJ83595.1};
InterProA0A0H9CXR3 
PFAMA0A0H9CXR3 
ProdomA0A0H9CXR3 
UniProtKBG3CA98SubName: Full=IS2 transposase TnpB {ECO:0000313|EMBL:CCC86536.1};
InterProG3CA98 
PFAMG3CA98 
ProdomG3CA98 
UniProtKBH4LGW1SubName: Full=Putative transposase {ECO:0000313|EMBL:EHU52198.1};
InterProH4LGW1 
PFAMH4LGW1 
ProdomH4LGW1 
UniProtKBH4L626SubName: Full=Putative transposase {ECO:0000313|EMBL:EHU37349.1};
InterProH4L626 
PFAMH4L626 
ProdomH4L626 
UniProtKBH5KQ52SubName: Full=Putative transposase;
InterProH5KQ52 
PFAMH5KQ52 
ProdomH5KQ52 
UniProtKBA0A0A5NNB2SubName: Full=Insertion element IS2 transposase InsD,IS2 transposase TnpB,Integrase core domain {ECO:0000313|EMBL:CDX06217.1};
InterProA0A0A5NNB2 
PFAMA0A0A5NNB2 
ProdomA0A0A5NNB2 
UniProtKBA0A087PJ76SubName: Full=Mobile element protein {ECO:0000313|EMBL:KFL87429.1};
InterProA0A087PJ76 
PFAMA0A087PJ76 
ProdomA0A087PJ76 
UniProtKBI6DLZ0SubName: Full=Integrase core domain protein {ECO:0000313|EMBL:EIQ32782.1};
InterProI6DLZ0 
PFAMI6DLZ0 
ProdomI6DLZ0 
UniProtKBL3UQQ6SubName: Full=Transposase insD for insertion element IS2A/D/F/H/I/K;
InterProL3UQQ6 
PFAML3UQQ6 
ProdomL3UQQ6 
UniProtKBM9K8A0SubName: Full=Integrase core domain protein {ECO:0000313|EMBL:EMX90406.1};
InterProM9K8A0 
PFAMM9K8A0 
ProdomM9K8A0 
UniProtKBF3VTG0SubName: Full=Integrase core domain protein;
InterProF3VTG0 
PFAMF3VTG0 
ProdomF3VTG0 
UniProtKBF4USV1SubName: Full=Transposase InsD for insertion element IS2A/D/F/H/I/K;
InterProF4USV1 
PFAMF4USV1 
ProdomF4USV1 
UniProtKBM9H749SubName: Full=Integrase core domain protein;
InterProM9H749 
PFAMM9H749 
ProdomM9H749 
UniProtKBN2I5L4SubName: Full=Integrase core domain protein;
InterProN2I5L4 
PFAMN2I5L4 
ProdomN2I5L4 
UniProtKBF5NKN1SubName: Full=Integrase core domain protein;
InterProF5NKN1 
PFAMF5NKN1 
ProdomF5NKN1 
UniProtKBN2IFZ0SubName: Full=Integrase core domain protein {ECO:0000313|EMBL:ENA22501.1};
InterProN2IFZ0 
PFAMN2IFZ0 
ProdomN2IFZ0 
UniProtKBF5P860SubName: Full=Integrase core domain protein;
InterProF5P860 
PFAMF5P860 
ProdomF5P860 
UniProtKBF5PN79SubName: Full=Integrase core domain protein;
InterProF5PN79 
PFAMF5PN79 
ProdomF5PN79 
UniProtKBH4KQS9SubName: Full=Putative transposase {ECO:0000313|EMBL:EHU35806.1};
InterProH4KQS9 
PFAMH4KQS9 
ProdomH4KQS9 
UniProtKBG2HK90SubName: Full=IS2 transposase InsD {ECO:0000313|EMBL:BAK64489.1};
InterProG2HK90 
PFAMG2HK90 
ProdomG2HK90 
UniProtKBJ2NI84SubName: Full=Putative transposase;
InterProJ2NI84 
PFAMJ2NI84 
ProdomJ2NI84 
UniProtKBC6UK21SubName: Full=IS2 insertion element transposase InsAB';
InterProC6UK21 
PFAMC6UK21 
ProdomC6UK21 
UniProtKBI6E455SubName: Full=Integrase core domain protein {ECO:0000313|EMBL:EIQ38797.1};
InterProI6E455 
PFAMI6E455 
ProdomI6E455 
UniProtKBI6DH59SubName: Full=Integrase core domain protein;
InterProI6DH59 
PFAMI6DH59 
ProdomI6DH59 
UniProtKBD2AAW0SubName: Full=Transposase insD for insertion element IS2A/D/F/H/I/K {ECO:0000313|EMBL:ADA73185.1};
InterProD2AAW0 
PFAMD2AAW0 
ProdomD2AAW0 
UniProtKBK0XK26SubName: Full=Putative transposase {ECO:0000313|EMBL:EJZ68149.1};
InterProK0XK26 
PFAMK0XK26 
ProdomK0XK26 
UniProtKBE3XYM8SubName: Full=Integrase core domain protein;
InterProE3XYM8 
PFAME3XYM8 
ProdomE3XYM8 
UniProtKBE7JT60SubName: Full=Integrase core domain protein;
InterProE7JT60 
PFAME7JT60 
ProdomE7JT60 
UniProtKBL3NZT8SubName: Full=Transposase insD for insertion element IS2A/D/F/H/I/K {ECO:0000313|EMBL:ELE40755.1};
InterProL3NZT8 
PFAML3NZT8 
ProdomL3NZT8 
UniProtKBE7SST2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFW57238.1};
InterProE7SST2 
PFAME7SST2 
ProdomE7SST2 
UniProtKBB3WVB6SubName: Full=IS2 transposase orfB {ECO:0000313|EMBL:EDX36846.1};
InterProB3WVB6 
PFAMB3WVB6 
ProdomB3WVB6 
UniProtKBB3H9Q9SubName: Full=Insertion element IS2 transposase InsD {ECO:0000313|EMBL:AIF63936.1};
InterProB3H9Q9 
PFAMB3H9Q9 
ProdomB3H9Q9 
UniProtKBI6EK03SubName: Full=Integrase core domain protein;
InterProI6EK03 
PFAMI6EK03 
ProdomI6EK03 
UniProtKBI2XKI5SubName: Full=Insertion element IS2 transposase InsD {ECO:0000313|EMBL:EII49505.1};
InterProI2XKI5 
PFAMI2XKI5 
ProdomI2XKI5 
UniProtKBI2ZQ24SubName: Full=Insertion element IS2 transposase InsD;
InterProI2ZQ24 
PFAMI2ZQ24 
ProdomI2ZQ24 
UniProtKBI0ZUK6SubName: Full=IS2 element protein;
InterProI0ZUK6 
PFAMI0ZUK6 
ProdomI0ZUK6 
UniProtKBI6CH90SubName: Full=Integrase core domain protein {ECO:0000313|EMBL:EIQ18882.1};
InterProI6CH90 
PFAMI6CH90 
ProdomI6CH90 
UniProtKBF5QW46SubName: Full=Putative transposase;
InterProF5QW46 
PFAMF5QW46 
ProdomF5QW46 
UniProtKBF7R7F0SubName: Full=Putative transposase;
InterProF7R7F0 
PFAMF7R7F0 
ProdomF7R7F0 
UniProtKBI6BL57SubName: Full=Integrase core domain protein;
InterProI6BL57 
PFAMI6BL57 
ProdomI6BL57 
UniProtKBF5Q0V5SubName: Full=Integrase core domain protein;
InterProF5Q0V5 
PFAMF5Q0V5 
ProdomF5Q0V5 
UniProtKBB1X6T3SubName: Full=CP4-44 prophage; IS2 insertion element transposase InsAB';SubName: Full=IS2 insertion element transposase InsAB';SubName: Full=KpLE2 phage-like element; IS2 insertion element transposase
InterProB1X6T3 
PFAMB1X6T3 
ProdomB1X6T3 
UniProtKBI6ET15SubName: Full=Integrase core domain protein;
InterProI6ET15 
PFAMI6ET15 
ProdomI6ET15 
UniProtKBL3WIY6SubName: Full=Transposase insD for insertion element IS2A/D/F/H/I/K;
InterProL3WIY6 
PFAML3WIY6 
ProdomL3WIY6 
UniProtKBE7T6T1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFW62296.1};
InterProE7T6T1 
PFAME7T6T1 
ProdomE7T6T1 
UniProtKBA0A029LFF2SubName: Full=Integrase core domain protein {ECO:0000313|EMBL:EZJ83672.1};
InterProA0A029LFF2 
PFAMA0A029LFF2 
ProdomA0A029LFF2 
UniProtKBF3WEE5SubName: Full=Integrase core domain protein {ECO:0000313|EMBL:EGI99561.1};
InterProF3WEE5 
PFAMF3WEE5 
ProdomF3WEE5 
UniProtKBA0A080F102SubName: Full=Integrase core domain protein {ECO:0000313|EMBL:KEN52871.1};
InterProA0A080F102 
PFAMA0A080F102 
ProdomA0A080F102 
UniProtKBA0A0F6MK46SubName: Full=IS ORFB {ECO:0000313|EMBL:EID64101.1};
InterProA0A0F6MK46 
PFAMA0A0F6MK46 
ProdomA0A0F6MK46 
UniProtKBH4ITB1SubName: Full=Putative transposase {ECO:0000313|EMBL:EHU10174.1};
InterProH4ITB1 
PFAMH4ITB1 
ProdomH4ITB1 
UniProtKBH5L6T6SubName: Full=Putative transposase;
InterProH5L6T6 
PFAMH5L6T6 
ProdomH5L6T6 
UniProtKBI6BJ17SubName: Full=Integrase core domain protein;
InterProI6BJ17 
PFAMI6BJ17 
ProdomI6BJ17 
UniProtKBG0FDL0SubName: Full=Integrase core domain protein {ECO:0000313|EMBL:AEJ55169.1};
InterProG0FDL0 
PFAMG0FDL0 
ProdomG0FDL0 
UniProtKBI6FKX5SubName: Full=Integrase core domain protein {ECO:0000313|EMBL:EIQ56917.1};
InterProI6FKX5 
PFAMI6FKX5 
ProdomI6FKX5 
UniProtKBC4ZQQ8SubName: Full=KpLE2 phage-like element; IS2 insertion element transposase InsAB';SubName: Full=Transposase insD for insertion element IS2A/D/F/H/I/K;
InterProC4ZQQ8 
PFAMC4ZQQ8 
ProdomC4ZQQ8 
UniProtKBL2ZP81SubName: Full=Transposase insD for insertion element IS2A/D/F/H/I/K;
InterProL2ZP81 
PFAML2ZP81 
ProdomL2ZP81 
UniProtKBM3KWZ4SubName: Full=IS2 transposase TnpB;
InterProM3KWZ4 
PFAMM3KWZ4 
ProdomM3KWZ4 
UniProtKBE2X136SubName: Full=Integrase core domain protein;
InterProE2X136 
PFAME2X136 
ProdomE2X136 
UniProtKBA0A070KQV2SubName: Full=Integrase core domain protein {ECO:0000313|EMBL:KDW34276.1};
InterProA0A070KQV2 
PFAMA0A070KQV2 
ProdomA0A070KQV2 
UniProtKBL2XQW5SubName: Full=Transposase insD for insertion element IS2A/D/F/H/I/K {ECO:0000313|EMBL:ELC41445.1};
InterProL2XQW5 
PFAML2XQW5 
ProdomL2XQW5 
UniProtKBA0A070Y198SubName: Full=Integrase core domain protein {ECO:0000313|EMBL:KDX84725.1};
InterProA0A070Y198 
PFAMA0A070Y198 
ProdomA0A070Y198 
UniProtKBI2RMD6SubName: Full=Insertion element IS2 transposase InsD {ECO:0000313|EMBL:EIG83421.1};
InterProI2RMD6 
PFAMI2RMD6 
ProdomI2RMD6 
UniProtKBD7GKP3SubName: Full=Transposase InsD for insertion element IS2a/d/f/h/i/k {ECO:0000313|EMBL:CBL93546.1};
InterProD7GKP3 
PFAMD7GKP3 
ProdomD7GKP3 
UniProtKBM9H8A5SubName: Full=Integrase core domain protein {ECO:0000313|EMBL:EMX43338.1};
InterProM9H8A5 
PFAMM9H8A5 
ProdomM9H8A5 
UniProtKBA0A073G1T7SubName: Full=Integrase core domain protein {ECO:0000313|EMBL:KEJ44370.1};
InterProA0A073G1T7 
PFAMA0A073G1T7 
ProdomA0A073G1T7 
UniProtKBA0A0J3VGT8SubName: Full=Transposase InsD for insertion element IS2A/D/F/H/I/K {ECO:0000313|EMBL:KME64539.1};
InterProA0A0J3VGT8 
PFAMA0A0J3VGT8 
ProdomA0A0J3VGT8 
UniProtKBI6BI07SubName: Full=Integrase core domain protein {ECO:0000313|EMBL:EIQ06899.1};
InterProI6BI07 
PFAMI6BI07 
ProdomI6BI07 
UniProtKBB2N5Z0SubName: Full=IS2, transposase orfB;
InterProB2N5Z0 
PFAMB2N5Z0 
ProdomB2N5Z0 
UniProtKBE7SDG6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFW52473.1};
InterProE7SDG6 
PFAME7SDG6 
ProdomE7SDG6 
UniProtKBM4JJ11SubName: Full=IS2 transposase TnpB;
InterProM4JJ11 
PFAMM4JJ11 
ProdomM4JJ11 
UniProtKBF3V6S1SubName: Full=Integrase core domain protein {ECO:0000313|EMBL:EGI97721.1};
InterProF3V6S1 
PFAMF3V6S1 
ProdomF3V6S1 
UniProtKBI4JCP6SubName: Full=Transposase insD for insertion element IS2A/D/F/H/I/K {ECO:0000313|EMBL:EIF87005.1};
InterProI4JCP6 
PFAMI4JCP6 
ProdomI4JCP6 
UniProtKBA7ZGY0SubName: Full=IS2, transposase orfB {ECO:0000313|EMBL:ABV16333.1};
InterProA7ZGY0 
PFAMA7ZGY0 
ProdomA7ZGY0 
UniProtKBI0VIY5SubName: Full=IS ORFB;
InterProI0VIY5 
PFAMI0VIY5 
ProdomI0VIY5 
UniProtKBI6FGC3SubName: Full=Putative transposase;
InterProI6FGC3 
PFAMI6FGC3 
ProdomI6FGC3 
UniProtKBB2TU15SubName: Full=IS2 transposase orfB {ECO:0000313|EMBL:ACD07309.1};
InterProB2TU15 
PFAMB2TU15 
ProdomB2TU15 
UniProtKBI6GB80SubName: Full=Integrase core domain protein;
InterProI6GB80 
PFAMI6GB80 
ProdomI6GB80 
UniProtKBJ2NDX4SubName: Full=Putative transposase {ECO:0000313|EMBL:EJL12432.1};
InterProJ2NDX4 
PFAMJ2NDX4 
ProdomJ2NDX4 
UniProtKBC9QQR7SubName: Full=IS2 insertion element transposase InsAB;SubName: Full=Integrase catalytic region;SubName: Full=KpLE2 phage-like element IS2 insertion element transposase InsAB;
InterProC9QQR7 
PFAMC9QQR7 
ProdomC9QQR7 
UniProtKBE2X463SubName: Full=Integrase core domain protein {ECO:0000313|EMBL:EFP73158.1};
InterProE2X463 
PFAME2X463 
ProdomE2X463 
UniProtKBL3I9Y9SubName: Full=Transposase insD for insertion element IS2A/D/F/H/I/K {ECO:0000313|EMBL:ELD71227.1};
InterProL3I9Y9 
PFAML3I9Y9 
ProdomL3I9Y9 
UniProtKBG2D3T2SubName: Full=Integrase core domain protein;
InterProG2D3T2 
PFAMG2D3T2 
ProdomG2D3T2 
UniProtKBH4XIY4SubName: Full=Putative transposase;
InterProH4XIY4 
PFAMH4XIY4 
ProdomH4XIY4 
UniProtKBH4WKS4SubName: Full=Integrase core domain protein;
InterProH4WKS4 
PFAMH4WKS4 
ProdomH4WKS4 
UniProtKBN2HX39SubName: Full=Integrase core domain protein;
InterProN2HX39 
PFAMN2HX39 
ProdomN2HX39 
UniProtKBF5N9S7SubName: Full=Integrase core domain protein {ECO:0000313|EMBL:EGK15909.1};
InterProF5N9S7 
PFAMF5N9S7 
ProdomF5N9S7 
UniProtKBF5P041SubName: Full=Integrase core domain protein {ECO:0000313|EMBL:EGK34284.1};
InterProF5P041 
PFAMF5P041 
ProdomF5P041 
UniProtKBM9F8R0SubName: Full=Integrase core domain protein {ECO:0000313|EMBL:EMX18738.1};
InterProM9F8R0 
PFAMM9F8R0 
ProdomM9F8R0 
UniProtKBA0A080FY71SubName: Full=Integrase core domain protein {ECO:0000313|EMBL:KEN67865.1};
InterProA0A080FY71 
PFAMA0A080FY71 
ProdomA0A080FY71 
UniProtKBA0A0E1LZ19SubName: Full=IS2 transposase TnpB {ECO:0000313|EMBL:AJF56343.1};
InterProA0A0E1LZ19 
PFAMA0A0E1LZ19 
ProdomA0A0E1LZ19 
UniProtKBA0A0G2XFY1SubName: Full=Transposase {ECO:0000313|EMBL:AKI69045.1};
InterProA0A0G2XFY1 
PFAMA0A0G2XFY1 
ProdomA0A0G2XFY1 
UniProtKBA0A0H3X6J5SubName: Full=IS2, transposase {ECO:0000313|EMBL:AKM35485.1};SubName: Full=Insertion element IS2 transposase InsD {ECO:0000313|EMBL:AKM33970.1};
InterProA0A0H3X6J5 
PFAMA0A0H3X6J5 
ProdomA0A0H3X6J5 
UniProtKBH3KXP6SubName: Full=Putative transposase {ECO:0000313|EMBL:EHU34102.1};
InterProH3KXP6 
PFAMH3KXP6 
ProdomH3KXP6 
UniProtKBJ7QJ11SubName: Full=Escherichia coli chi7122 chi7122 genomic chromosome, chi7122 {ECO:0000313|EMBL:CCK45929.1};SubName: Full=Is2 element protein {ECO:0000313|EMBL:CCK46710.1};SubName: Full=Transposase insd
InterProJ7QJ11 
PFAMJ7QJ11 
ProdomJ7QJ11