University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A0A090H665
Original Database ID ref NP_418766.4
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation subname: full=5-methylcytosine-specific
restriction enzyme b {eco:0000313|embl:c
ee04120.1};ec=3.1.21.- {eco:0000313|embl:cee04120.1};subname:
full=5- ...
Sequence Length 459

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region1-395
Protein Length459
Template PDB Code4akgA
Template Region2219-2606
Sequence Identity17%
E-Value0
GA3410.92
MPQS0.825466
z-DOPE0.75
TSVMod MethodMSALL
TSVMod RMSD10.694
TSVMod NO350.293
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4akg
DBALI4akgA 
JenaImageLibrary4akg 
Target Sequence
UniProtKBQ2M5X0RecName: Full=5-methylcytosine-specific restriction enzyme B;EC=3.1.21.-;AltName: Full=EcoKMcrBC;
InterProQ2M5X0 
PFAMQ2M5X0 
ProdomQ2M5X0 
UniProtKBI4TQK2SubName: Full=5-methylcytosine-specific restriction enzyme McrBC, subunit McrB;
InterProI4TQK2 
PFAMI4TQK2 
ProdomI4TQK2 
UniProtKBG2F577SubName: Full=5-methylcytosine-specific restriction enzyme subunit McrB;
InterProG2F577 
PFAMG2F577 
ProdomG2F577 
UniProtKBC4ZT29SubName: Full=5-methylcytosine-specific restriction enzyme McrBC, subunit McrB;
InterProC4ZT29 
PFAMC4ZT29 
ProdomC4ZT29 
UniProtKBF9R0D5SubName: Full=5-methylcytosine-specific restriction enzyme subunit McrB;
InterProF9R0D5 
PFAMF9R0D5 
ProdomF9R0D5 
UniProtKBF4T9A6SubName: Full=5-methylcytosine-specific restriction enzyme B (EcoKMcrBC) {ECO:0000313|EMBL:EGI23329.1};
InterProF4T9A6 
PFAMF4T9A6 
ProdomF4T9A6 
UniProtKBD6IJI9SubName: Full=5-methylcytosine-specific restriction enzyme subunit McrB;
InterProD6IJI9 
PFAMD6IJI9 
ProdomD6IJI9 
UniProtKBE6NW97SubName: Full=5-methylcytosine-specific restriction enzyme subunit;
InterProE6NW97 
PFAME6NW97 
ProdomE6NW97 
UniProtKBD7JJ25SubName: Full=5-methylcytosine-specific restriction enzyme subunit McrB;
InterProD7JJ25 
PFAMD7JJ25 
ProdomD7JJ25 
UniProtKBB7NH01SubName: Full=5-methylcytosine-specific restriction enzyme McrBC, subunit McrB {ECO:0000313|EMBL:CAR16066.1};EC=3.1.21.4 {ECO:0000313|EMBL:CAR16066.1};
InterProB7NH01 
PFAMB7NH01 
ProdomB7NH01 
UniProtKBA0A090H665SubName: Full=5-methylcytosine-specific restriction enzyme B {ECO:0000313|EMBL:CEE04120.1};EC=3.1.21.- {ECO:0000313|EMBL:CEE04120.1};SubName: Full=5-methylcytosine-specific restriction protein B {ECO:
InterProA0A090H665 
PFAMA0A090H665 
ProdomA0A090H665 
UniProtKBP15005RecName: Full=5-methylcytosine-specific restriction enzyme B;EC=3.1.21.-;AltName: Full=EcoKMcrBC;
InterProP15005 
PFAMP15005 
ProdomP15005 
UniProtKBB7NH01SubName: Full=5-methylcytosine-specific restriction enzyme McrBC, subunit McrB;EC=3.1.21.4;
InterProB7NH01 
PFAMB7NH01 
ProdomB7NH01 
UniProtKBD6IJI9SubName: Full=5-methylcytosine-specific restriction enzyme subunit McrB;
InterProD6IJI9 
PFAMD6IJI9 
ProdomD6IJI9 
UniProtKBF9R0D5SubName: Full=5-methylcytosine-specific restriction enzyme subunit McrB;
InterProF9R0D5 
PFAMF9R0D5 
ProdomF9R0D5 
UniProtKBA0A7U8ZI96SubName: Full=5-methylcytosine-specific restriction enzyme subunit McrB {ECO:0000313|EMBL:EFF02933.2}
InterProA0A7U8ZI96 
PFAMA0A7U8ZI96 
ProdomA0A7U8ZI96 
UniProtKBF4T9A6SubName: Full=5-methylcytosine-specific restriction enzyme B (EcoKMcrBC);
InterProF4T9A6 
PFAMF4T9A6 
ProdomF4T9A6 
UniProtKBA0A5Q3TG63SubName: Full=5-methylcytosine-specific restriction enzyme B {ECO:0000313|EMBL:QGL43472.1}
InterProA0A5Q3TG63 
PFAMA0A5Q3TG63 
ProdomA0A5Q3TG63 
UniProtKBA0A8F9H9V4SubName: Full=5-methylcytosine-specific restriction endonuclease subunit McrB {ECO:0000313|EMBL:QYE25175.1}EC=3.1.21.- {ECO:0000313|EMBL:QYE25175.1}
InterProA0A8F9H9V4 
PFAMA0A8F9H9V4 
ProdomA0A8F9H9V4 
UniProtKBA0A7U9A1C3SubName: Full=5-methylcytosine-specific restriction enzyme subunit McrB {ECO:0000313|EMBL:EFI22366.1}
InterProA0A7U9A1C3 
PFAMA0A7U9A1C3 
ProdomA0A7U9A1C3 
UniProtKBD7JJ25SubName: Full=5-methylcytosine-specific restriction enzyme subunit McrB;
InterProD7JJ25 
PFAMD7JJ25 
ProdomD7JJ25 
UniProtKBI4TQK2SubName: Full=5-methylcytosine-specific restriction enzyme McrBC, subunit McrB;
InterProI4TQK2 
PFAMI4TQK2 
ProdomI4TQK2 
UniProtKBQ2M5X05-methylcytosine-specific restriction enzyme McrBC, subunit McrB
InterProQ2M5X0 
PFAMQ2M5X0 
ProdomQ2M5X0 
UniProtKBG2F577SubName: Full=5-methylcytosine-specific restriction enzyme subunit McrB;
InterProG2F577 
PFAMG2F577 
ProdomG2F577 
UniProtKBE6NW97SubName: Full=5-methylcytosine-specific restriction enzyme subunit;
InterProE6NW97 
PFAME6NW97 
ProdomE6NW97 
UniProtKBC4ZT29SubName: Full=5-methylcytosine-specific restriction enzyme McrBC, subunit McrB;
InterProC4ZT29 
PFAMC4ZT29 
ProdomC4ZT29 
UniProtKBP15005RecName: Full=5-methylcytosine-specific restriction enzyme B;EC=3.1.21.-;AltName: Full=EcoKMcrBC;
InterProP15005 
PFAMP15005 
ProdomP15005 
UniProtKBA0A7H2C770Type IV methyl-directed restriction enzyme EcoKMcrB subunit {ECO:0000303|PubMed:12654995}Short=EcoKMcrBC {ECO:0000303|PubMed:1312983}AltName: Full=5-methylcytosine-specific restriction enzyme BEC=3.1.
InterProA0A7H2C770 
PFAMA0A7H2C770 
ProdomA0A7H2C770 
UniProtKBP15005.3MCRB_ECOLI RecName: Full=5-methylcytosine-specific restriction enzyme B; AltName: Full=EcoKMcrBC
InterProP15005.3 
PFAMP15005.3 
ProdomP15005.3 
UniProtKBQ2M5X0RecName: Full=5-methylcytosine-specific restriction enzyme B;EC=3.1.21.-;AltName: Full=EcoKMcrBC;
InterProQ2M5X0 
PFAMQ2M5X0 
ProdomQ2M5X0 
RefSeqAP_004835.1 5-methylcytosine-specific restriction enzyme McrBC, subunit McrB [Escherichia coli str. K-12 substr. W3110]
RefSeqZP_06988415.1 5-methylcytosine-specific restriction enzyme subunit McrB [Escherichia coli FVEC1302]
RefSeqZP_07505837.1 5-methylcytosine-specific restriction enzyme subunit McrB [Escherichia coli M718]
RefSeqZP_06647101.1 5-methylcytosine-specific restriction enzyme subunit McrB [Escherichia coli FVEC1412]
RefSeqYP_002929230.1 5-methylcytosine-specific restriction enzyme McrBC, subunit McrB [Escherichia coli BW2952]
RefSeqYP_002415532.1 5-methylcytosine-specific restriction enzyme subunit McrB [Escherichia coli UMN026]
RefSeqNP_418766.4 5-methylcytosine-specific restriction enzyme McrBC, subunit McrB [Escherichia coli str. K-12 substr. MG1655]
PDB6UT6DCryo-EM structure of the Escherichia coli McrBC complex
PDB6UT6FCryo-EM structure of the Escherichia coli McrBC complex
PDB6UT6ACryo-EM structure of the Escherichia coli McrBC complex
PDB6UT6BCryo-EM structure of the Escherichia coli McrBC complex
PDB6UT6CCryo-EM structure of the Escherichia coli McrBC complex
PDB6UT6ECryo-EM structure of the Escherichia coli McrBC complex
GenPept8175816045-methylcytosine-specific restriction enzyme McrBC, subunit McrB
GenPept3310512805-methylcytosine-specific restriction enzyme B (EcoKMcrBC)
GenPept218708013 5-methylcytosine-specific restriction enzyme subunit McrB [Escherichia coli UMN026]
GenPept5572744865-methylcytosine-specific restriction enzyme subunit McrB
GenPept6821216895-methylcytosine-specific restriction enzyme McrBC, subunit McrB
GenPept687675102MrcB subunit of 5-methylcytosine restriction system, subunit of McrBC restriction endonuclease
GenPept687679412MrcB subunit of 5-methylcytosine restriction system, subunit of McrBC restriction endonuclease
GenPept2184351105-methylcytosine-specific restriction enzyme McrBC, subunit McrB
GenPept7232338145-methylcytosine-specific restriction protein B
GenPept7326860795-methylcytosine-specific restriction protein B
GenPept8086987435-methylcytosine-specific restriction protein B
GenPept5498156175-methylcytosine-specific restriction enzyme McrBC, subunit McrB
GenPept3915756MCRB_ECOLI RecName: Full=5-methylcytosine-specific restriction enzyme B; AltName: Full=EcoKMcrBC
GenPept2388598835-methylcytosine-specific restriction enzyme McrBC, subunit McrB
GenPept238903434 5-methylcytosine-specific restriction enzyme McrBC, subunit McrB [Escherichia coli BW2952]
GenPept2914299195-methylcytosine-specific restriction enzyme subunit McrB
GenPept293403004 5-methylcytosine-specific restriction enzyme subunit McrB [Escherichia coli FVEC1412]
GenPept2982808655-methylcytosine-specific restriction enzyme subunit McrB
GenPept298378531 5-methylcytosine-specific restriction enzyme subunit McrB [Escherichia coli FVEC1302]
GenPept307219413 5-methylcytosine-specific restriction enzyme subunit McrB [Escherichia coli M718]
GenPept3151389015-methylcytosine-specific restriction enzyme subunit
GenPept8087074955-methylcytosine-specific restriction protein B
GenPept8175940245-methylcytosine-specific restriction enzyme McrBC, subunit McrB
GenPept8175898855-methylcytosine-specific restriction enzyme McrBC, subunit McrB
GenPept8997251885-methylcytosine-specific restriction protein B
GenPept870824295-methylcytosine-specific restriction enzyme McrBC, subunit McrB
GenPept856770865-methylcytosine-specific restriction enzyme McrBC, subunit McrB
GenPept8997295405-methylcytosine-specific restriction protein B
GenPept8997340605-methylcytosine-specific restriction protein B
GenPept8175857445-methylcytosine-specific restriction enzyme McrBC, subunit McrB
GenPept90111737 5-methylcytosine-specific restriction enzyme McrBC, subunit McrB [Escherichia coli str. K-12 substr. MG1655]
GenPept8175774635-methylcytosine-specific restriction enzyme McrBC, subunit McrB
GenPept8087333725-methylcytosine-specific restriction protein B
GenPept8087289605-methylcytosine-specific restriction protein B
GenPept8087206385-methylcytosine-specific restriction protein B
GenPept8087162675-methylcytosine-specific restriction protein B
GenPept8087118555-methylcytosine-specific restriction protein B
GenPept89111055 5-methylcytosine-specific restriction enzyme McrBC, subunit McrB [Escherichia coli str. K-12 substr. W3110]
GenBankACR61881.1 5-methylcytosine-specific restriction enzyme McrBC, subunit McrB [Escherichia coli BW2952]
GenBankEFF02933.1 5-methylcytosine-specific restriction enzyme subunit McrB [Escherichia coli FVEC1412]
GenBankAAC77302.2 5-methylcytosine-specific restriction enzyme McrBC, subunit McrB [Escherichia coli str. K-12 substr. MG1655]
GenBankEFI22366.1 5-methylcytosine-specific restriction enzyme subunit McrB [Escherichia coli FVEC1302]
EMBLCAR16066.1