University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P15029
Original Database ID ref NP_418708.1
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation recname: full=fe(3+) dicitrate
transport system permease protein
fecd;altname: f ull=iron(iii)
dicitrate transport system permease
protein fecd;
Sequence Length 318

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region2-316
Protein Length318
Template PDB Code2qi9A
Template Region12-323
Sequence Identity36%
E-Value0
GA3411
MPQS1.38817
z-DOPE0.04
TSVMod MethodMSALL
TSVMod RMSD2.567
TSVMod NO350.73
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2qi9abc-transporter btucd in complex with its periplasmic binding protein btuf
DBALI2qi9A 
CATH1.10.3470.10 Domain: 2qi9A00 ABC transporter involved in vitamin B12 uptake, BtuC (96%)
JenaImageLibrary2qi9 
Target Sequence
UniProtKBI0ZMD7SubName: Full=Iron(III) dicitrate transport system permease protein FecD;
InterProI0ZMD7 
PFAMI0ZMD7 
ProdomI0ZMD7 
UniProtKBT7N7E5SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT7N7E5 
PFAMT7N7E5 
ProdomT7N7E5 
UniProtKBT7S2F2SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT7S2F2 
PFAMT7S2F2 
ProdomT7S2F2 
UniProtKBT7Y517SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT7Y517 
PFAMT7Y517 
ProdomT7Y517 
UniProtKBA0A090I324SubName: Full=Fe(3+) dicitrate transport system permease protein fecD {ECO:0000313|EMBL:CEE09455.1};SubName: Full=Iron-dicitrate transporter subunit FecD {ECO:0000313|EMBL:AIX66363.1};
InterProA0A090I324 
PFAMA0A090I324 
ProdomA0A090I324 
UniProtKBA0A0G3HYV5SubName: Full=KpLE2 phage-like element iron-dicitrate transporter subunit protein {ECO:0000313|EMBL:AKK16317.1};
InterProA0A0G3HYV5 
PFAMA0A0G3HYV5 
ProdomA0A0G3HYV5 
UniProtKBL2XS02SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProL2XS02 
PFAML2XS02 
ProdomL2XS02 
UniProtKBL2ZP24SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProL2ZP24 
PFAML2ZP24 
ProdomL2ZP24 
UniProtKBL3DUD2SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProL3DUD2 
PFAML3DUD2 
ProdomL3DUD2 
UniProtKBT7IJ84SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT7IJ84 
PFAMT7IJ84 
ProdomT7IJ84 
UniProtKBT7G3W4SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT7G3W4 
PFAMT7G3W4 
ProdomT7G3W4 
UniProtKBT5T563SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT5T563 
PFAMT5T563 
ProdomT5T563 
UniProtKBT5VFV3SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT5VFV3 
PFAMT5VFV3 
ProdomT5VFV3 
UniProtKBT6ETI8SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT6ETI8 
PFAMT6ETI8 
ProdomT6ETI8 
UniProtKBT6K222SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT6K222 
PFAMT6K222 
ProdomT6K222 
UniProtKBT6RCC9SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT6RCC9 
PFAMT6RCC9 
ProdomT6RCC9 
UniProtKBT6W3E7SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT6W3E7 
PFAMT6W3E7 
ProdomT6W3E7 
UniProtKBT7ACM3SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT7ACM3 
PFAMT7ACM3 
ProdomT7ACM3 
UniProtKBT7C8D5SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT7C8D5 
PFAMT7C8D5 
ProdomT7C8D5 
UniProtKBL2ZX43SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProL2ZX43 
PFAML2ZX43 
ProdomL2ZX43 
UniProtKBL3CIM3SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProL3CIM3 
PFAML3CIM3 
ProdomL3CIM3 
UniProtKBE1HGA6SubName: Full=Iron(III) dicitrate transport system permease protein FecD {ECO:0000313|EMBL:EFK93051.1};
InterProE1HGA6 
PFAME1HGA6 
ProdomE1HGA6 
UniProtKBE7IDU1SubName: Full=Iron(III) dicitrate transport system permease protein fecD;
InterProE7IDU1 
PFAME7IDU1 
ProdomE7IDU1 
UniProtKBL3IJA1SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProL3IJA1 
PFAML3IJA1 
ProdomL3IJA1 
UniProtKBL3R494SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProL3R494 
PFAML3R494 
ProdomL3R494 
UniProtKBL3RWA5SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProL3RWA5 
PFAML3RWA5 
ProdomL3RWA5 
UniProtKBL3U5Q5SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProL3U5Q5 
PFAML3U5Q5 
ProdomL3U5Q5 
UniProtKBF9R068SubName: Full=Iron-dicitrate transporter subunit FecD;
InterProF9R068 
PFAMF9R068 
ProdomF9R068 
UniProtKBG2F8X8SubName: Full=Iron-dicitrate transporter subunit FecD;
InterProG2F8X8 
PFAMG2F8X8 
ProdomG2F8X8 
UniProtKBD7X7L0SubName: Full=Iron(III) dicitrate transport system permease protein FecD {ECO:0000313|EMBL:EFJ73732.1};
InterProD7X7L0 
PFAMD7X7L0 
ProdomD7X7L0 
UniProtKBD7JIT5SubName: Full=FecD;
InterProD7JIT5 
PFAMD7JIT5 
ProdomD7JIT5 
UniProtKBU9ZNP7SubName: Full=Iron(III) dicitrate transport system permease protein FecD {ECO:0000313|EMBL:ESA87121.1};
InterProU9ZNP7 
PFAMU9ZNP7 
ProdomU9ZNP7 
UniProtKBB1XER2SubName: Full=KpLE2 phage-like element; iron-dicitrate transporter subunit; membrane component of ABC superfamily;
InterProB1XER2 
PFAMB1XER2 
ProdomB1XER2 
UniProtKBB7NGQ6SubName: Full=Iron-dicitrate transporter subunit membrane component of ABC superfamily KpLE2 phage-like element {ECO:0000313|EMBL:CAR15969.1};
InterProB7NGQ6 
PFAMB7NGQ6 
ProdomB7NGQ6 
UniProtKBC4ZRF0SubName: Full=KpLE2 phage-like element; iron-dicitrate transporter subunit;
InterProC4ZRF0 
PFAMC4ZRF0 
ProdomC4ZRF0 
UniProtKBI4TPU0SubName: Full=Iron-dicitrate transporter subunit FecD;
InterProI4TPU0 
PFAMI4TPU0 
ProdomI4TPU0 
UniProtKBC9QTF0SubName: Full=FecD;SubName: Full=Transport system permease protein;
InterProC9QTF0 
PFAMC9QTF0 
ProdomC9QTF0 
UniProtKBL2UPS1SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProL2UPS1 
PFAML2UPS1 
ProdomL2UPS1 
UniProtKBD6IJ97SubName: Full=FecD;
InterProD6IJ97 
PFAMD6IJ97 
ProdomD6IJ97 
UniProtKBS1QSF6SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProS1QSF6 
PFAMS1QSF6 
ProdomS1QSF6 
UniProtKBS1MWN7SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProS1MWN7 
PFAMS1MWN7 
ProdomS1MWN7 
UniProtKBL5GGA2SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProL5GGA2 
PFAML5GGA2 
ProdomL5GGA2 
UniProtKBT8D9X3SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT8D9X3 
PFAMT8D9X3 
ProdomT8D9X3 
UniProtKBT7ACD5SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT7ACD5 
PFAMT7ACD5 
ProdomT7ACD5 
UniProtKBT6SSE1SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT6SSE1 
PFAMT6SSE1 
ProdomT6SSE1 
UniProtKBT6R3S1SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT6R3S1 
PFAMT6R3S1 
ProdomT6R3S1 
UniProtKBS1PFI3SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProS1PFI3 
PFAMS1PFI3 
ProdomS1PFI3 
UniProtKBS1L941SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProS1L941 
PFAMS1L941 
ProdomS1L941 
UniProtKBT6B469SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT6B469 
PFAMT6B469 
ProdomT6B469 
UniProtKBQ2M627RecName: Full=Fe(3+) dicitrate transport system permease protein FecD;AltName: Full=Iron(III) dicitrate transport system permease protein FecD;
InterProQ2M627 
PFAMQ2M627 
ProdomQ2M627 
UniProtKBT6ZLI7SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT6ZLI7 
PFAMT6ZLI7 
ProdomT6ZLI7 
UniProtKBT8B2Y8SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT8B2Y8 
PFAMT8B2Y8 
ProdomT8B2Y8 
UniProtKBL4W9R2SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProL4W9R2 
PFAML4W9R2 
ProdomL4W9R2 
UniProtKBT8KAQ8SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT8KAQ8 
PFAMT8KAQ8 
ProdomT8KAQ8 
UniProtKBT7J608SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT7J608 
PFAMT7J608 
ProdomT7J608 
UniProtKBS1CLR0SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProS1CLR0 
PFAMS1CLR0 
ProdomS1CLR0 
UniProtKBT7A0L8SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT7A0L8 
PFAMT7A0L8 
ProdomT7A0L8 
UniProtKBT6FNS3SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT6FNS3 
PFAMT6FNS3 
ProdomT6FNS3 
UniProtKBT6XB99SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT6XB99 
PFAMT6XB99 
ProdomT6XB99 
UniProtKBS1QD48SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProS1QD48 
PFAMS1QD48 
ProdomS1QD48 
UniProtKBT9YNA5SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT9YNA5 
PFAMT9YNA5 
ProdomT9YNA5 
UniProtKBL4XCC9SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProL4XCC9 
PFAML4XCC9 
ProdomL4XCC9 
UniProtKBU0CPT2SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProU0CPT2 
PFAMU0CPT2 
ProdomU0CPT2 
UniProtKBT9PBA7SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT9PBA7 
PFAMT9PBA7 
ProdomT9PBA7 
UniProtKBS0YD55SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProS0YD55 
PFAMS0YD55 
ProdomS0YD55 
UniProtKBS1A3M8SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProS1A3M8 
PFAMS1A3M8 
ProdomS1A3M8 
UniProtKBS1JV88SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProS1JV88 
PFAMS1JV88 
ProdomS1JV88 
UniProtKBS1MS46SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProS1MS46 
PFAMS1MS46 
ProdomS1MS46 
UniProtKBT8I887SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT8I887 
PFAMT8I887 
ProdomT8I887 
UniProtKBT8HU52SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT8HU52 
PFAMT8HU52 
ProdomT8HU52 
UniProtKBL4KDN1SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProL4KDN1 
PFAML4KDN1 
ProdomL4KDN1 
UniProtKBT5Q2J9SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT5Q2J9 
PFAMT5Q2J9 
ProdomT5Q2J9 
UniProtKBP15029RecName: Full=Fe(3+) dicitrate transport system permease protein FecD;AltName: Full=Iron(III) dicitrate transport system permease protein FecD;
InterProP15029 
PFAMP15029 
ProdomP15029 
UniProtKBT7ER24SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT7ER24 
PFAMT7ER24 
ProdomT7ER24 
UniProtKBT7LT97SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT7LT97 
PFAMT7LT97 
ProdomT7LT97 
UniProtKBT7XB46SubName: Full=Fe(3+) dicitrate transport system permease fecD;
InterProT7XB46 
PFAMT7XB46 
ProdomT7XB46 
UniProtKBE7IDU1SubName: Full=Iron(III) dicitrate transport system permease protein fecD;
InterProE7IDU1 
PFAME7IDU1 
ProdomE7IDU1 
UniProtKBC9QTF0SubName: Full=FecD;SubName: Full=Transport system permease protein;
InterProC9QTF0 
PFAMC9QTF0 
ProdomC9QTF0 
UniProtKBD7X7L0SubName: Full=Iron(III) dicitrate transport system permease protein FecD;
InterProD7X7L0 
PFAMD7X7L0 
ProdomD7X7L0 
UniProtKBF9R068SubName: Full=Iron-dicitrate transporter subunit FecD;
InterProF9R068 
PFAMF9R068 
ProdomF9R068 
UniProtKBI0ZMD7SubName: Full=Iron(III) dicitrate transport system permease protein FecD;
InterProI0ZMD7 
PFAMI0ZMD7 
ProdomI0ZMD7 
UniProtKBE1HGA6SubName: Full=Iron(III) dicitrate transport system permease protein FecD;
InterProE1HGA6 
PFAME1HGA6 
ProdomE1HGA6 
UniProtKBI4TPU0SubName: Full=Iron-dicitrate transporter subunit FecD;
InterProI4TPU0 
PFAMI4TPU0 
ProdomI4TPU0 
UniProtKBG2F8X8SubName: Full=Iron-dicitrate transporter subunit FecD;
InterProG2F8X8 
PFAMG2F8X8 
ProdomG2F8X8 
UniProtKBD7JIT5SubName: Full=FecD;
InterProD7JIT5 
PFAMD7JIT5 
ProdomD7JIT5 
UniProtKBA0A5Q3TH83SubName: Full=Fe(3+) dicitrate ABC transporter permease subunit FecD {ECO:0000313|EMBL:QGL43415.1}
InterProA0A5Q3TH83 
PFAMA0A5Q3TH83 
ProdomA0A5Q3TH83 
UniProtKBA0A7L7X8K2SubName: Full=Fe(3+) dicitrate ABC transporter permease subunit FecD {ECO:0000313|EMBL:QOD20345.1}
InterProA0A7L7X8K2 
PFAMA0A7L7X8K2 
ProdomA0A7L7X8K2 
UniProtKBA0A7U8ZJ03SubName: Full=FecD {ECO:0000313|EMBL:EFF02841.2}
InterProA0A7U8ZJ03 
PFAMA0A7U8ZJ03 
ProdomA0A7U8ZJ03 
UniProtKBA0A7U9A170SubName: Full=FecD {ECO:0000313|EMBL:EFI22276.1}
InterProA0A7U9A170 
PFAMA0A7U9A170 
ProdomA0A7U9A170 
UniProtKBA0A829IW04SubName: Full=Fe(3+) dicitrate transport system permease fecD {ECO:0000313|EMBL:EQV93898.1}
InterProA0A829IW04 
PFAMA0A829IW04 
ProdomA0A829IW04 
UniProtKBA0A829LFF1SubName: Full=Iron(III) dicitrate transport system permease protein FecD {ECO:0000313|EMBL:ESD82151.1}
InterProA0A829LFF1 
PFAMA0A829LFF1 
ProdomA0A829LFF1 
UniProtKBA0A8E0J7M9SubName: Full=Fe(3+) dicitrate transport system permease fecD {ECO:0000313|EMBL:EQV77867.1}
InterProA0A8E0J7M9 
PFAMA0A8E0J7M9 
ProdomA0A8E0J7M9 
UniProtKBB1XER2SubName: Full=KpLE2 phage-like element; iron-dicitrate transporter subunit; membrane component of ABC superfamily;
InterProB1XER2 
PFAMB1XER2 
ProdomB1XER2 
UniProtKBB7NGQ6SubName: Full=Iron-dicitrate transporter subunit ; membrane component of ABC superfamily; KpLE2 phage-like element;
InterProB7NGQ6 
PFAMB7NGQ6 
ProdomB7NGQ6 
UniProtKBQ2M627Iron-dicitrate transporter subunit
InterProQ2M627 
PFAMQ2M627 
ProdomQ2M627 
UniProtKBC4ZRF0SubName: Full=KpLE2 phage-like element; iron-dicitrate transporter subunit;
InterProC4ZRF0 
PFAMC4ZRF0 
ProdomC4ZRF0 
UniProtKBA0A8F9MIZ5SubName: Full=Fe(3+) dicitrate ABC transporter permease subunit FecD {ECO:0000313|EMBL:QYE25228.1}
InterProA0A8F9MIZ5 
PFAMA0A8F9MIZ5 
ProdomA0A8F9MIZ5 
UniProtKBD6IJ97SubName: Full=FecD;
InterProD6IJ97 
PFAMD6IJ97 
ProdomD6IJ97 
UniProtKBP15029.2FECD_ECOLI RecName: Full=Fe(3+) dicitrate transport system permease protein fecD; AltName: Full=Iron(III) dicitrate transport system permease protein fecD
InterProP15029.2 
PFAMP15029.2 
ProdomP15029.2 
UniProtKBQ2M627RecName: Full=Fe(3+) dicitrate transport system permease protein FecD;AltName: Full=Iron(III) dicitrate transport system permease protein FecD;
InterProQ2M627 
PFAMQ2M627 
ProdomQ2M627