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Sequence Information

Primary Database Link P21507.1
Original Database ID sp P21507.1
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation srmb_ecoli recname: full=atp-dependent
rna helicase srmb
Sequence Length 444

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region4-433
Protein Length444
Template PDB Code4a4zA
Template Region308-873
Sequence Identity16%
E-Value0
GA3411
MPQS0.912768
z-DOPE0.54
TSVMod MethodMSALL
TSVMod RMSD7.219
TSVMod NO350.474
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4a4z
DBALI4a4zA 
JenaImageLibrary4a4z 
Target Sequence
UniProtKBM2NKV0SubName: Full=ATP-dependent RNA helicase SrmB;
InterProM2NKV0 
PFAMM2NKV0 
ProdomM2NKV0 
UniProtKBB1XBQ3SubName: Full=ATP-dependent RNA helicase;
InterProB1XBQ3 
PFAMB1XBQ3 
ProdomB1XBQ3 
UniProtKBC9R143SubName: Full=ATP-dependent RNA helicase SrmB;SubName: Full=DEAD/DEAH box helicase domain protein;
InterProC9R143 
PFAMC9R143 
ProdomC9R143 
UniProtKBF9QVE8SubName: Full=ATP-dependent RNA helicase SrmB;
InterProF9QVE8 
PFAMF9QVE8 
ProdomF9QVE8 
UniProtKBG2F0Y1SubName: Full=ATP-dependent RNA helicase SrmB;
InterProG2F0Y1 
PFAMG2F0Y1 
ProdomG2F0Y1 
UniProtKBH0Q933SubName: Full=ATP-dependent RNA helicase;
InterProH0Q933 
PFAMH0Q933 
ProdomH0Q933 
UniProtKBI0ZTI8SubName: Full=ATP-dependent RNA helicase;
InterProI0ZTI8 
PFAMI0ZTI8 
ProdomI0ZTI8 
UniProtKBA0A0G3I4Y7RecName: Full=ATP-dependent RNA helicase SrmB {ECO:0000256|HAMAP-Rule:MF_00967};EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00967};
InterProA0A0G3I4Y7 
PFAMA0A0G3I4Y7 
ProdomA0A0G3I4Y7 
UniProtKBA0A090JP04RecName: Full=ATP-dependent RNA helicase SrmB {ECO:0000256|HAMAP-Rule:MF_00967};EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00967};
InterProA0A090JP04 
PFAMA0A090JP04 
ProdomA0A090JP04 
UniProtKBC4ZYJ9SubName: Full=ATP-dependent RNA helicase;
InterProC4ZYJ9 
PFAMC4ZYJ9 
ProdomC4ZYJ9 
UniProtKBW0FU03SubName: Full=ATP-dependent RNA helicase {ECO:0000313|EMBL:AHF26635.1};
InterProW0FU03 
PFAMW0FU03 
ProdomW0FU03 
UniProtKBQ2MAF4RecName: Full=ATP-dependent RNA helicase SrmB;EC=3.6.4.13;
InterProQ2MAF4 
PFAMQ2MAF4 
ProdomQ2MAF4 
UniProtKBA0A069Z079RecName: Full=ATP-dependent RNA helicase SrmB {ECO:0000256|HAMAP-Rule:MF_00967};EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00967};
InterProA0A069Z079 
PFAMA0A069Z079 
ProdomA0A069Z079 
UniProtKBA0A069XNP1RecName: Full=ATP-dependent RNA helicase SrmB {ECO:0000256|HAMAP-Rule:MF_00967};EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00967};
InterProA0A069XNP1 
PFAMA0A069XNP1 
ProdomA0A069XNP1 
UniProtKBA0A073TBW6RecName: Full=ATP-dependent RNA helicase SrmB {ECO:0000256|HAMAP-Rule:MF_00967};EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00967};
InterProA0A073TBW6 
PFAMA0A073TBW6 
ProdomA0A073TBW6 
UniProtKBP21507RecName: Full=ATP-dependent RNA helicase SrmB;EC=3.6.4.13;
InterProP21507 
PFAMP21507 
ProdomP21507 
UniProtKBA0A5Q3TBR5ATP-dependent RNA helicase SrmB {ECO:0000256|HAMAP-Rule:MF_00967}EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00967}
InterProA0A5Q3TBR5 
PFAMA0A5Q3TBR5 
ProdomA0A5Q3TBR5 
UniProtKBA0A8F8DHS6SubName: Full=ATP-dependent RNA helicase SrmB {ECO:0000313|EMBL:QXZ37997.1}EC=3.6.4.13 {ECO:0000313|EMBL:QXZ37997.1}
InterProA0A8F8DHS6 
PFAMA0A8F8DHS6 
ProdomA0A8F8DHS6 
UniProtKBA0A2S5ZNQ8ATP-dependent RNA helicase SrmB {ECO:0000256|HAMAP-Rule:MF_00967}EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00967}
InterProA0A2S5ZNQ8 
PFAMA0A2S5ZNQ8 
ProdomA0A2S5ZNQ8 
UniProtKBA0A8F9MSM4SubName: Full=ATP-dependent RNA helicase SrmB {ECO:0000313|EMBL:QYE26776.1}EC=3.6.4.13 {ECO:0000313|EMBL:QYE26776.1}
InterProA0A8F9MSM4 
PFAMA0A8F9MSM4 
ProdomA0A8F9MSM4 
UniProtKBB1XBQ3SubName: Full=ATP-dependent RNA helicase;
InterProB1XBQ3 
PFAMB1XBQ3 
ProdomB1XBQ3 
UniProtKBQ2MAF4ATP-dependent RNA helicase
InterProQ2MAF4 
PFAMQ2MAF4 
ProdomQ2MAF4 
UniProtKBA0A8F7SG01SubName: Full=ATP-dependent RNA helicase SrmB {ECO:0000313|EMBL:QXW78649.1}EC=3.6.4.13 {ECO:0000313|EMBL:QXW78649.1}
InterProA0A8F7SG01 
PFAMA0A8F7SG01 
ProdomA0A8F7SG01 
UniProtKBC4ZYJ9SubName: Full=ATP-dependent RNA helicase;
InterProC4ZYJ9 
PFAMC4ZYJ9 
ProdomC4ZYJ9 
UniProtKBC9R143SubName: Full=ATP-dependent RNA helicase SrmB;SubName: Full=DEAD/DEAH box helicase domain protein;
InterProC9R143 
PFAMC9R143 
ProdomC9R143 
UniProtKBF9QVE8SubName: Full=ATP-dependent RNA helicase SrmB;
InterProF9QVE8 
PFAMF9QVE8 
ProdomF9QVE8 
UniProtKBG2F0Y1SubName: Full=ATP-dependent RNA helicase SrmB;
InterProG2F0Y1 
PFAMG2F0Y1 
ProdomG2F0Y1 
UniProtKBH0Q933SubName: Full=ATP-dependent RNA helicase;
InterProH0Q933 
PFAMH0Q933 
ProdomH0Q933 
UniProtKBI0ZTI8SubName: Full=ATP-dependent RNA helicase;
InterProI0ZTI8 
PFAMI0ZTI8 
ProdomI0ZTI8 
UniProtKBQ2MAF4RecName: Full=ATP-dependent RNA helicase SrmB {ECO:0000255|HAMAP-Rule:MF_00967};EC=3.6.4.13 {ECO:0000255|HAMAP-Rule:MF_00967};
InterProQ2MAF4 
PFAMQ2MAF4 
ProdomQ2MAF4 
UniProtKBP21507.1SRMB_ECOLI RecName: Full=ATP-dependent RNA helicase srmB
InterProP21507.1 
PFAMP21507.1 
ProdomP21507.1 
UniProtKBP21507RecName: Full=ATP-dependent RNA helicase SrmB {ECO:0000255|HAMAP-Rule:MF_00967};EC=3.6.4.13 {ECO:0000255|HAMAP-Rule:MF_00967};
InterProP21507 
PFAMP21507 
ProdomP21507 
RefSeqYP_001731505.1 ATP-dependent RNA helicase [Escherichia coli str. K-12 substr. DH10B]
RefSeqNP_417071.1 ATP-dependent RNA helicase [Escherichia coli str. K-12 substr. MG1655]
RefSeqYP_002927537.1 ATP-dependent RNA helicase [Escherichia coli BW2952]
RefSeqAP_003162.1 ATP-dependent RNA helicase [Escherichia coli str. K-12 substr. W3110]
GenPept300580727unnamed protein product
GenPept808735903ATP-dependent RNA helicase SrmB
GenPept987650putative ATP dependent RNA helicase
GenPept932860652ATP-dependent RNA helicase SrmB
GenPept899732319ATP-dependent RNA helicase SrmB
GenPept899727875ATP-dependent RNA helicase SrmB
GenPept899723520ATP-dependent RNA helicase SrmB
GenPept89109382 ATP-dependent RNA helicase [Escherichia coli str. K-12 substr. W3110]
GenPept134878SRMB_ECOLI RecName: Full=ATP-dependent RNA helicase SrmB
GenPept359332885ATP-dependent RNA helicase
GenPept42996SrmB protein
GenPept550833635Sequence 79449 from patent US 8541208
GenPept557272851ATP-dependent RNA helicase SrmB
GenPept571053047ATP-dependent RNA helicase
GenPept682120053ATP-dependent RNA helicase
GenPept687673426SrmB, DEAD-box RNA helicase
GenPept687677711SrmB, DEAD-box RNA helicase
GenPept730583785ATP-dependent RNA helicase
GenPept315137200ATP-dependent RNA helicase SrmB
GenPept285777putative ATP dependent RNA helicase
GenPept16130501 ATP-dependent RNA helicase [Escherichia coli str. K-12 substr. MG1655]
GenPept167296704Sequence 23506 from patent US 7314974
GenPept169890020ATP-dependent RNA helicase
GenPept170082185 ATP-dependent RNA helicase [Escherichia coli str. K-12 substr. DH10B]
GenPept1788930ATP-dependent RNA helicase
GenPept238860047ATP-dependent RNA helicase
GenPept238901741 ATP-dependent RNA helicase [Escherichia coli BW2952]
GenPept259709024unnamed protein product
GenPept260448344DEAD/DEAH box helicase domain protein
GenPept731471514ATP-dependent RNA helicase
GenPept732683552ATP-dependent RNA helicase SrmB
GenPept808718786ATP-dependent RNA helicase SrmB
GenPept808723158ATP-dependent RNA helicase SrmB
GenPept808731474ATP-dependent RNA helicase SrmB
GenPept817575825ATP-dependent RNA helicase
GenPept817579967ATP-dependent RNA helicase
GenPept817584106ATP-dependent RNA helicase
GenPept817588247ATP-dependent RNA helicase
GenPept817592387ATP-dependent RNA helicase
GenPept827619485ATP-dependent RNA helicase protein
GenPept827622743ATP-dependent RNA helicase protein
GenPept808714376ATP-dependent RNA helicase SrmB
GenPept808710014ATP-dependent RNA helicase SrmB
GenPept7446085G65035 ATP-dependent RNA helicase SrmB - Escherichia coli
GenPept802135962ATP-dependent RNA helicase
GenPept664684876ATP-dependent RNA helicase SrmB
GenPept85675467ATP-dependent RNA helicase
GenPept808701280ATP-dependent RNA helicase SrmB
GenPept808705654ATP-dependent RNA helicase SrmB
GenBankACX38766.1 DEAD/DEAH box helicase domain protein [Escherichia coli DH1]
GenBankACB03727.1 ATP-dependent RNA helicase [Escherichia coli str. K-12 substr. DH10B]
GenBankAAC75629.1 ATP-dependent RNA helicase [Escherichia coli str. K-12 substr. MG1655]
GenBankACR62045.1 ATP-dependent RNA helicase [Escherichia coli BW2952]
EMBLCAA32364.1