University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P23898
Original Database ID ref NP_416223.1
Organism Escherichia coli, Shigella boydii, etc.
Annotation recname: full=probable endopeptidase
nlpc;ec=3.4.-.-;altname: full=orf-17;altnam
e: full=probable lipoprotein nlpc;flags:
precursor;
Sequence Length 154

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region31-154
Protein Length154
Template PDB Code2k1gA
Template Region37-158
Sequence Identity49%
E-Value0
GA3411
MPQS1.54969
z-DOPE-1.71
TSVMod MethodMTALL
TSVMod RMSD0.73
TSVMod NO350.908
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2k1gsolution nmr structure of lipoprotein spr from escherichia coli k12. northeast structural genomics target er541-37-162
DBALI2k1gA 
CATH3.90.1720.10 Domain: 2k1gA00 endopeptidase domain like (from Nostoc punctiforme) (95%)
JenaImageLibrary2k1g 
Target Sequence
UniProtKBI4TCM1SubName: Full=Putative lipoprotein;
InterProI4TCM1 
PFAMI4TCM1 
ProdomI4TCM1 
UniProtKBA0A071DDS5SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:KDZ38496.1};
InterProA0A071DDS5 
PFAMA0A071DDS5 
ProdomA0A071DDS5 
UniProtKBA0A073GUW6SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:KEJ68731.1};
InterProA0A073GUW6 
PFAMA0A073GUW6 
ProdomA0A073GUW6 
UniProtKBA0A079DNB0SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:KDY23608.1};
InterProA0A079DNB0 
PFAMA0A079DNB0 
ProdomA0A079DNB0 
UniProtKBA0A079EYH1SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:KDY50323.1};
InterProA0A079EYH1 
PFAMA0A079EYH1 
ProdomA0A079EYH1 
UniProtKBA0A079H6J2SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:KDY98995.1};
InterProA0A079H6J2 
PFAMA0A079H6J2 
ProdomA0A079H6J2 
UniProtKBA0A080GMN4SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:KEN90695.1};
InterProA0A080GMN4 
PFAMA0A080GMN4 
ProdomA0A080GMN4 
UniProtKBA0A0E1M2E9SubName: Full=Putative C40 clan peptidase lipoprotein {ECO:0000313|EMBL:AJF56559.1};
InterProA0A0E1M2E9 
PFAMA0A0E1M2E9 
ProdomA0A0E1M2E9 
UniProtKBA0A0E3MYM1SubName: Full=Putative endopeptidase NlpC {ECO:0000313|EMBL:AKA90725.1};
InterProA0A0E3MYM1 
PFAMA0A0E3MYM1 
ProdomA0A0E3MYM1 
UniProtKBA0A0H4RYE4SubName: Full=Lipoprotein {ECO:0000313|EMBL:AKP84441.1};
InterProA0A0H4RYE4 
PFAMA0A0H4RYE4 
ProdomA0A0H4RYE4 
UniProtKBF9HWK1SubName: Full=NlpC;
InterProF9HWK1 
PFAMF9HWK1 
ProdomF9HWK1 
UniProtKBA0A071C442SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:KDY91602.1};
InterProA0A071C442 
PFAMA0A071C442 
ProdomA0A071C442 
UniProtKBA0A071ACM9SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:KDY56971.1};
InterProA0A071ACM9 
PFAMA0A071ACM9 
ProdomA0A071ACM9 
UniProtKBF4MAY1SubName: Full=Lipoprotein NlpC;
InterProF4MAY1 
PFAMF4MAY1 
ProdomF4MAY1 
UniProtKBD8AUX1SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:EFK13052.1};
InterProD8AUX1 
PFAMD8AUX1 
ProdomD8AUX1 
UniProtKBE1HTG2SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:EFK88789.1};
InterProE1HTG2 
PFAME1HTG2 
ProdomE1HTG2 
UniProtKBJ7R1N3SubName: Full=Endopeptidase {ECO:0000313|EMBL:AJB51827.1};SubName: Full=Lipoprotein {ECO:0000313|EMBL:CCJ44217.1};SubName: Full=Lipoprotein NlpC {ECO:0000313|EMBL:AJE56140.1};SubName: Full=NLP/P60 pro
InterProJ7R1N3 
PFAMJ7R1N3 
ProdomJ7R1N3 
UniProtKBJ7RTN3SubName: Full=Lipoprotein {ECO:0000313|EMBL:CCK46943.1};
InterProJ7RTN3 
PFAMJ7RTN3 
ProdomJ7RTN3 
UniProtKBE6B077SubName: Full=Putative lipoprotein nlpC {ECO:0000313|EMBL:EFU99488.1};
InterProE6B077 
PFAME6B077 
ProdomE6B077 
UniProtKBE6BDU4SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:EFU37455.1};
InterProE6BDU4 
PFAME6BDU4 
ProdomE6BDU4 
UniProtKBK0AK97SubName: Full=Putative lipoprotein;
InterProK0AK97 
PFAMK0AK97 
ProdomK0AK97 
UniProtKBK3H6U7SubName: Full=Putative lipoprotein NlpC;
InterProK3H6U7 
PFAMK3H6U7 
ProdomK3H6U7 
UniProtKBE9WXJ3SubName: Full=NlpC/P60 family protein;
InterProE9WXJ3 
PFAME9WXJ3 
ProdomE9WXJ3 
UniProtKBE9XZJ0SubName: Full=NlpC/P60 family protein;
InterProE9XZJ0 
PFAME9XZJ0 
ProdomE9XZJ0 
UniProtKBF8YGR6SubName: Full=Putative lipoprotein;
InterProF8YGR6 
PFAMF8YGR6 
ProdomF8YGR6 
UniProtKBF4SK50SubName: Full=NlpC (ORF-17) {ECO:0000313|EMBL:EGI11324.1};
InterProF4SK50 
PFAMF4SK50 
ProdomF4SK50 
UniProtKBH4Y1F9SubName: Full=NlpC/P60 family protein;
InterProH4Y1F9 
PFAMH4Y1F9 
ProdomH4Y1F9 
UniProtKBH4XL73SubName: Full=NlpC/P60 family protein;
InterProH4XL73 
PFAMH4XL73 
ProdomH4XL73 
UniProtKBB1IPL9SubName: Full=NLP/P60 protein;
InterProB1IPL9 
PFAMB1IPL9 
ProdomB1IPL9 
UniProtKBB1XG15SubName: Full=Predicted lipoprotein;
InterProB1XG15 
PFAMB1XG15 
ProdomB1XG15 
UniProtKBI2P762SubName: Full=Uncharacterized protein;
InterProI2P762 
PFAMI2P762 
ProdomI2P762 
UniProtKBC5W4S1SubName: Full=NLP/P60 protein {ECO:0000313|EMBL:ACT28983.1};
InterProC5W4S1 
PFAMC5W4S1 
ProdomC5W4S1 
UniProtKBI2ZQM9SubName: Full=NlpC/P60 family protein;
InterProI2ZQM9 
PFAMI2ZQM9 
ProdomI2ZQM9 
UniProtKBI2YN40SubName: Full=NlpC/P60 family protein;
InterProI2YN40 
PFAMI2YN40 
ProdomI2YN40 
UniProtKBC6UJ24SubName: Full=Predicted lipoprotein;
InterProC6UJ24 
PFAMC6UJ24 
ProdomC6UJ24 
UniProtKBD7XNL8SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:EFJ87015.1};
InterProD7XNL8 
PFAMD7XNL8 
ProdomD7XNL8 
UniProtKBH4WB70SubName: Full=NlpC/P60 family protein;
InterProH4WB70 
PFAMH4WB70 
ProdomH4WB70 
UniProtKBH4WRJ4SubName: Full=NlpC/P60 family protein;
InterProH4WRJ4 
PFAMH4WRJ4 
ProdomH4WRJ4 
UniProtKBG5XX75SubName: Full=Putative uncharacterized protein;
InterProG5XX75 
PFAMG5XX75 
ProdomG5XX75 
UniProtKBG2CKH2SubName: Full=Putative lipoprotein nlpC;
InterProG2CKH2 
PFAMG2CKH2 
ProdomG2CKH2 
UniProtKBG2CZ04SubName: Full=Putative lipoprotein nlpC;
InterProG2CZ04 
PFAMG2CZ04 
ProdomG2CZ04 
UniProtKBG2AV75SubName: Full=Putative lipoprotein nlpC;
InterProG2AV75 
PFAMG2AV75 
ProdomG2AV75 
UniProtKBG5V9I2SubName: Full=Putative uncharacterized protein;
InterProG5V9I2 
PFAMG5V9I2 
ProdomG5V9I2 
UniProtKBG5USR9SubName: Full=Putative uncharacterized protein;
InterProG5USR9 
PFAMG5USR9 
ProdomG5USR9 
UniProtKBG5WTJ8SubName: Full=Putative uncharacterized protein;
InterProG5WTJ8 
PFAMG5WTJ8 
ProdomG5WTJ8 
UniProtKBG5U8J0SubName: Full=Putative uncharacterized protein;
InterProG5U8J0 
PFAMG5U8J0 
ProdomG5U8J0 
UniProtKBG0F3J8SubName: Full=Putative lipoprotein nlpC (ORF-17) {ECO:0000313|EMBL:AEJ56738.1};
InterProG0F3J8 
PFAMG0F3J8 
ProdomG0F3J8 
UniProtKBH4UJL0SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:EHV59760.1};
InterProH4UJL0 
PFAMH4UJL0 
ProdomH4UJL0 
UniProtKBG5YH29SubName: Full=Putative uncharacterized protein;
InterProG5YH29 
PFAMG5YH29 
ProdomG5YH29 
UniProtKBI4JBA4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIF86513.1};
InterProI4JBA4 
PFAMI4JBA4 
ProdomI4JBA4 
UniProtKBD7Y1X3SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:EFJ98362.1};
InterProD7Y1X3 
PFAMD7Y1X3 
ProdomD7Y1X3 
UniProtKBA0A029KUM1SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:EZJ76422.1};
InterProA0A029KUM1 
PFAMA0A029KUM1 
ProdomA0A029KUM1 
UniProtKBJ9ZLT6SubName: Full=Putative lipoprotein;
InterProJ9ZLT6 
PFAMJ9ZLT6 
ProdomJ9ZLT6 
UniProtKBA0A070SS21SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:KDX20832.1};
InterProA0A070SS21 
PFAMA0A070SS21 
ProdomA0A070SS21 
UniProtKBA0A073TXN8SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:KEL26982.1};
InterProA0A073TXN8 
PFAMA0A073TXN8 
ProdomA0A073TXN8 
UniProtKBA0A0E0TZ04SubName: Full=Lipoprotein NlpC {ECO:0000313|EMBL:AEE56761.1};
InterProA0A0E0TZ04 
PFAMA0A0E0TZ04 
ProdomA0A0E0TZ04 
UniProtKBF9QUX2SubName: Full=Putative lipoprotein;
InterProF9QUX2 
PFAMF9QUX2 
ProdomF9QUX2 
UniProtKBG5TXW9SubName: Full=Putative uncharacterized protein;
InterProG5TXW9 
PFAMG5TXW9 
ProdomG5TXW9 
UniProtKBG5X862SubName: Full=Putative uncharacterized protein;
InterProG5X862 
PFAMG5X862 
ProdomG5X862 
UniProtKBH4VWH5SubName: Full=NlpC/P60 family protein;
InterProH4VWH5 
PFAMH4VWH5 
ProdomH4VWH5 
UniProtKBH4YG36SubName: Full=NlpC/P60 family protein;
InterProH4YG36 
PFAMH4YG36 
ProdomH4YG36 
UniProtKBC4ZYH0SubName: Full=Predicted lipoprotein;
InterProC4ZYH0 
PFAMC4ZYH0 
ProdomC4ZYH0 
UniProtKBI6G727SubName: Full=NlpC/P60 family protein;
InterProI6G727 
PFAMI6G727 
ProdomI6G727 
UniProtKBI2XCW0SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:EII46830.1};
InterProI2XCW0 
PFAMI2XCW0 
ProdomI2XCW0 
UniProtKBA0A029MQE9SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:EZJ99824.1};
InterProA0A029MQE9 
PFAMA0A029MQE9 
ProdomA0A029MQE9 
UniProtKBB7L6I1SubName: Full=NlpC protein {ECO:0000313|EMBL:CAU97734.1};
InterProB7L6I1 
PFAMB7L6I1 
ProdomB7L6I1 
UniProtKBA0A069XTP3SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:KDU30967.1};
InterProA0A069XTP3 
PFAMA0A069XTP3 
ProdomA0A069XTP3 
UniProtKBG2B9W4SubName: Full=Putative lipoprotein nlpC;
InterProG2B9W4 
PFAMG2B9W4 
ProdomG2B9W4 
UniProtKBI2I8U5SubName: Full=Putative lipoprotein;
InterProI2I8U5 
PFAMI2I8U5 
ProdomI2I8U5 
UniProtKBE1JE52SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:EFK65871.1};
InterProE1JE52 
PFAME1JE52 
ProdomE1JE52 
UniProtKBA0A069Z787SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:KDU54799.1};
InterProA0A069Z787 
PFAMA0A069Z787 
ProdomA0A069Z787 
UniProtKBA0A080I760SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:KEO24362.1};
InterProA0A080I760 
PFAMA0A080I760 
ProdomA0A080I760 
UniProtKBG5TGM7SubName: Full=Putative uncharacterized protein;
InterProG5TGM7 
PFAMG5TGM7 
ProdomG5TGM7 
UniProtKBH4VGH6SubName: Full=NlpC/P60 family protein;
InterProH4VGH6 
PFAMH4VGH6 
ProdomH4VGH6 
UniProtKBI2YC88SubName: Full=NlpC/P60 family protein;
InterProI2YC88 
PFAMI2YC88 
ProdomI2YC88 
UniProtKBD7ZWA2SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:EFK24825.1};
InterProD7ZWA2 
PFAMD7ZWA2 
ProdomD7ZWA2 
UniProtKBI0ZT40SubName: Full=NlpC/P60 family protein;
InterProI0ZT40 
PFAMI0ZT40 
ProdomI0ZT40 
UniProtKBG2EYK5SubName: Full=Putative lipoprotein;
InterProG2EYK5 
PFAMG2EYK5 
ProdomG2EYK5 
UniProtKBG5VPM2SubName: Full=Putative uncharacterized protein;
InterProG5VPM2 
PFAMG5VPM2 
ProdomG5VPM2 
UniProtKBG5W680SubName: Full=Putative uncharacterized protein;
InterProG5W680 
PFAMG5W680 
ProdomG5W680 
UniProtKBH0QD26SubName: Full=Predicted lipoprotein;
InterProH0QD26 
PFAMH0QD26 
ProdomH0QD26 
UniProtKBH4V0Y1SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:EHV58905.1};
InterProH4V0Y1 
PFAMH4V0Y1 
ProdomH4V0Y1 
UniProtKBH4X5B4SubName: Full=NlpC/P60 family protein;
InterProH4X5B4 
PFAMH4X5B4 
ProdomH4X5B4 
UniProtKBE9Y8W7SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:EGB69083.1};
InterProE9Y8W7 
PFAME9Y8W7 
ProdomE9Y8W7 
UniProtKBG5XD61SubName: Full=Putative uncharacterized protein;
InterProG5XD61 
PFAMG5XD61 
ProdomG5XD61 
UniProtKBI2R215SubName: Full=Uncharacterized protein;
InterProI2R215 
PFAMI2R215 
ProdomI2R215 
UniProtKBC6ECP9SubName: Full=NLP/P60 protein {ECO:0000313|EMBL:ACT28983.1};
InterProC6ECP9 
PFAMC6ECP9 
ProdomC6ECP9 
UniProtKBF4NFF9SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:EGJ04839.1};
InterProF4NFF9 
PFAMF4NFF9 
ProdomF4NFF9 
UniProtKBF9CJ48SubName: Full=Putative lipoprotein;
InterProF9CJ48 
PFAMF9CJ48 
ProdomF9CJ48 
UniProtKBA0A0G3HH39SubName: Full=Putative peptidase, C40 clan, lipoprotein {ECO:0000313|EMBL:AKK12621.1};
InterProA0A0G3HH39 
PFAMA0A0G3HH39 
ProdomA0A0G3HH39 
UniProtKBE3PMT3SubName: Full=Putative lipoprotein {ECO:0000313|EMBL:CBJ01245.1};
InterProE3PMT3 
PFAME3PMT3 
ProdomE3PMT3 
UniProtKBK0BJH3SubName: Full=Putative lipoprotein;
InterProK0BJH3 
PFAMK0BJH3 
ProdomK0BJH3 
UniProtKBE9WF58SubName: Full=NlpC/P60 family protein;
InterProE9WF58 
PFAME9WF58 
ProdomE9WF58 
UniProtKBJ2DZU2SubName: Full=Putative lipoprotein nlpC;
InterProJ2DZU2 
PFAMJ2DZU2 
ProdomJ2DZU2 
UniProtKBA0A070Y635SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:KDX86581.1};
InterProA0A070Y635 
PFAMA0A070Y635 
ProdomA0A070Y635 
UniProtKBA0A071CGL7SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:KDZ18089.1};
InterProA0A071CGL7 
PFAMA0A071CGL7 
ProdomA0A071CGL7 
UniProtKBA0A074HWD6SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:KEN98817.1};
InterProA0A074HWD6 
PFAMA0A074HWD6 
ProdomA0A074HWD6 
UniProtKBA0A079FHH5SubName: Full=NlpC/P60 family protein {ECO:0000313|EMBL:KDY57883.1};
InterProA0A079FHH5 
PFAMA0A079FHH5 
ProdomA0A079FHH5 
UniProtKBA0A0E0XYH9SubName: Full=Putative lipoprotein {ECO:0000313|EMBL:AFS74228.1};
InterProA0A0E0XYH9 
PFAMA0A0E0XYH9 
ProdomA0A0E0XYH9 
UniProtKBC9QTZ9SubName: Full=NLP/P60 protein;SubName: Full=Putative lipoprotein;
InterProC9QTZ9 
PFAMC9QTZ9 
ProdomC9QTZ9