University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P23910.1
Original Database ID ref NP_414930.3
Organism Escherichia coli, Shigella boydii, etc.
Annotation araj_ecoli recname: full=protein
araj
Sequence Length 394

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region2-387
Protein Length394
Template PDB Code3wdoA
Template Region11-402
Sequence Identity19%
E-Value0
GA3410.99
MPQS1.1656
z-DOPE0.3
TSVMod MethodMSALL
TSVMod RMSD12.168
TSVMod NO350.089
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3wdo
DBALI3wdoA 
JenaImageLibrary3wdo 
Target Sequence
UniProtKBM8P6C7SubName: Full=Protein AraJ;
InterProM8P6C7 
PFAMM8P6C7 
ProdomM8P6C7 
UniProtKBA0A074I0T7SubName: Full=Protein AraJ {ECO:0000313|EMBL:KEO01869.1};
InterProA0A074I0T7 
PFAMA0A074I0T7 
ProdomA0A074I0T7 
UniProtKBA0A079H2B5SubName: Full=Protein AraJ {ECO:0000313|EMBL:KDY97546.1};
InterProA0A079H2B5 
PFAMA0A079H2B5 
ProdomA0A079H2B5 
UniProtKBA0A080GW58SubName: Full=Protein AraJ {ECO:0000313|EMBL:KEN92379.1};
InterProA0A080GW58 
PFAMA0A080GW58 
ProdomA0A080GW58 
UniProtKBA0A080II52SubName: Full=Protein AraJ {ECO:0000313|EMBL:KEO28457.1};
InterProA0A080II52 
PFAMA0A080II52 
ProdomA0A080II52 
UniProtKBA0A090HKS7SubName: Full=MFS transporter {ECO:0000313|EMBL:AJB54484.1};SubName: Full=Putative sugar efflux transporter {ECO:0000313|EMBL:KGM68584.1};SubName: Full=Transporter protein AraJ {ECO:0000313|EMBL:KGM77
InterProA0A090HKS7 
PFAMA0A090HKS7 
ProdomA0A090HKS7 
UniProtKBN4E1V5SubName: Full=Protein AraJ;
InterProN4E1V5 
PFAMN4E1V5 
ProdomN4E1V5 
UniProtKBN4ERL0SubName: Full=Protein AraJ;
InterProN4ERL0 
PFAMN4ERL0 
ProdomN4ERL0 
UniProtKBN4H6S6SubName: Full=Protein AraJ;
InterProN4H6S6 
PFAMN4H6S6 
ProdomN4H6S6 
UniProtKBA0A071CU42SubName: Full=Protein AraJ {ECO:0000313|EMBL:KDZ18195.1};
InterProA0A071CU42 
PFAMA0A071CU42 
ProdomA0A071CU42 
UniProtKBA0A071C461SubName: Full=Protein AraJ {ECO:0000313|EMBL:KDY92849.1};
InterProA0A071C461 
PFAMA0A071C461 
ProdomA0A071C461 
UniProtKBM8WC00SubName: Full=Protein AraJ;
InterProM8WC00 
PFAMM8WC00 
ProdomM8WC00 
UniProtKBM9H402SubName: Full=Protein AraJ;
InterProM9H402 
PFAMM9H402 
ProdomM9H402 
UniProtKBN1SPC8SubName: Full=Protein AraJ;
InterProN1SPC8 
PFAMN1SPC8 
ProdomN1SPC8 
UniProtKBN2FTX9SubName: Full=Protein AraJ;
InterProN2FTX9 
PFAMN2FTX9 
ProdomN2FTX9 
UniProtKBN2HTM1SubName: Full=Protein AraJ;
InterProN2HTM1 
PFAMN2HTM1 
ProdomN2HTM1 
UniProtKBN2PSP0SubName: Full=Protein AraJ;
InterProN2PSP0 
PFAMN2PSP0 
ProdomN2PSP0 
UniProtKBA0A070SVC2SubName: Full=Protein AraJ {ECO:0000313|EMBL:KDX21380.1};
InterProA0A070SVC2 
PFAMA0A070SVC2 
ProdomA0A070SVC2 
UniProtKBA0A070YC40SubName: Full=Protein AraJ {ECO:0000313|EMBL:KDX89222.1};
InterProA0A070YC40 
PFAMA0A070YC40 
ProdomA0A070YC40 
UniProtKBN4HB65SubName: Full=Protein AraJ;
InterProN4HB65 
PFAMN4HB65 
ProdomN4HB65 
UniProtKBN4HSE6SubName: Full=Protein AraJ;
InterProN4HSE6 
PFAMN4HSE6 
ProdomN4HSE6 
UniProtKBN4IIX1SubName: Full=Protein AraJ;
InterProN4IIX1 
PFAMN4IIX1 
ProdomN4IIX1 
UniProtKBC4ZTF3SubName: Full=Predicted transporter;
InterProC4ZTF3 
PFAMC4ZTF3 
ProdomC4ZTF3 
UniProtKBD8AL74SubName: Full=Protein AraJ {ECO:0000313|EMBL:EFK16078.1};
InterProD8AL74 
PFAMD8AL74 
ProdomD8AL74 
UniProtKBE1HRW4SubName: Full=Protein AraJ {ECO:0000313|EMBL:EFK89344.1};
InterProE1HRW4 
PFAME1HRW4 
ProdomE1HRW4 
UniProtKBE2WRD9SubName: Full=Protein araJ;
InterProE2WRD9 
PFAME2WRD9 
ProdomE2WRD9 
UniProtKBE3PFL2SubName: Full=Major facilitator superfamily protein {ECO:0000313|EMBL:CBI99953.1};
InterProE3PFL2 
PFAME3PFL2 
ProdomE3PFL2 
UniProtKBE6B5Y5SubName: Full=Protein araJ {ECO:0000313|EMBL:EFU97283.1};
InterProE6B5Y5 
PFAME6B5Y5 
ProdomE6B5Y5 
UniProtKBG2CG38SubName: Full=Protein araJ;
InterProG2CG38 
PFAMG2CG38 
ProdomG2CG38 
UniProtKBN3Q801SubName: Full=Protein AraJ;
InterProN3Q801 
PFAMN3Q801 
ProdomN3Q801 
UniProtKBB1XEY4SubName: Full=Predicted transporter;
InterProB1XEY4 
PFAMB1XEY4 
ProdomB1XEY4 
UniProtKBB1J053SubName: Full=Major facilitator superfamily MFS_1;Flags: Precursor;
InterProB1J053 
PFAMB1J053 
ProdomB1J053 
UniProtKBN4MVX4SubName: Full=Protein AraJ;
InterProN4MVX4 
PFAMN4MVX4 
ProdomN4MVX4 
UniProtKBP23910RecName: Full=Protein AraJ;
InterProP23910 
PFAMP23910 
ProdomP23910 
UniProtKBG0FC90SubName: Full=Protein araJ {ECO:0000313|EMBL:AEJ55015.1};
InterProG0FC90 
PFAMG0FC90 
ProdomG0FC90 
UniProtKBV0ZXE2SubName: Full=Protein AraJ {ECO:0000313|EMBL:ESD97986.1};
InterProV0ZXE2 
PFAMV0ZXE2 
ProdomV0ZXE2 
UniProtKBG2AQI9SubName: Full=Protein araJ;
InterProG2AQI9 
PFAMG2AQI9 
ProdomG2AQI9 
UniProtKBN4FMQ5SubName: Full=Protein AraJ;
InterProN4FMQ5 
PFAMN4FMQ5 
ProdomN4FMQ5 
UniProtKBG2B5V2SubName: Full=Protein araJ;
InterProG2B5V2 
PFAMG2B5V2 
ProdomG2B5V2 
UniProtKBN3M9Q1SubName: Full=Protein AraJ;
InterProN3M9Q1 
PFAMN3M9Q1 
ProdomN3M9Q1 
UniProtKBF9R1J8SubName: Full=MFS transport protein AraJ;
InterProF9R1J8 
PFAMF9R1J8 
ProdomF9R1J8 
UniProtKBM8P575SubName: Full=Protein AraJ;
InterProM8P575 
PFAMM8P575 
ProdomM8P575 
UniProtKBK5G8B8SubName: Full=Protein AraJ;
InterProK5G8B8 
PFAMK5G8B8 
ProdomK5G8B8 
UniProtKBN2W9B9SubName: Full=Protein AraJ;
InterProN2W9B9 
PFAMN2W9B9 
ProdomN2W9B9 
UniProtKBN4MS25SubName: Full=Protein AraJ;
InterProN4MS25 
PFAMN4MS25 
ProdomN4MS25 
UniProtKBH4UF80SubName: Full=Protein AraJ {ECO:0000313|EMBL:EHV63332.1};
InterProH4UF80 
PFAMH4UF80 
ProdomH4UF80 
UniProtKBN2H2M5SubName: Full=Protein AraJ;
InterProN2H2M5 
PFAMN2H2M5 
ProdomN2H2M5 
UniProtKBK3JR61SubName: Full=Protein AraJ;
InterProK3JR61 
PFAMK3JR61 
ProdomK3JR61 
UniProtKBM8M901SubName: Full=Protein AraJ;
InterProM8M901 
PFAMM8M901 
ProdomM8M901 
UniProtKBM8NTB0SubName: Full=Protein AraJ;
InterProM8NTB0 
PFAMM8NTB0 
ProdomM8NTB0 
UniProtKBM8QBW0SubName: Full=Protein AraJ;
InterProM8QBW0 
PFAMM8QBW0 
ProdomM8QBW0 
UniProtKBM9H768SubName: Full=Protein AraJ {ECO:0000313|EMBL:EMX32967.1};
InterProM9H768 
PFAMM9H768 
ProdomM9H768 
UniProtKBN2V1I9SubName: Full=Protein AraJ;
InterProN2V1I9 
PFAMN2V1I9 
ProdomN2V1I9 
UniProtKBN2RCJ6SubName: Full=Protein AraJ;
InterProN2RCJ6 
PFAMN2RCJ6 
ProdomN2RCJ6 
UniProtKBI2I2Z0SubName: Full=MFS transport protein AraJ;
InterProI2I2Z0 
PFAMI2I2Z0 
ProdomI2I2Z0 
UniProtKBN2FW55SubName: Full=Protein AraJ;
InterProN2FW55 
PFAMN2FW55 
ProdomN2FW55 
UniProtKBM2PY35SubName: Full=MFS transport protein AraJ;
InterProM2PY35 
PFAMM2PY35 
ProdomM2PY35 
UniProtKBN2L1B0SubName: Full=Protein AraJ;
InterProN2L1B0 
PFAMN2L1B0 
ProdomN2L1B0 
UniProtKBN2TV83SubName: Full=Protein AraJ;
InterProN2TV83 
PFAMN2TV83 
ProdomN2TV83 
UniProtKBQ2MC30RecName: Full=Protein AraJ;
InterProQ2MC30 
PFAMQ2MC30 
ProdomQ2MC30 
UniProtKBG2F335SubName: Full=MFS transport protein AraJ;
InterProG2F335 
PFAMG2F335 
ProdomG2F335 
UniProtKBM8LZA2SubName: Full=Protein AraJ;
InterProM8LZA2 
PFAMM8LZA2 
ProdomM8LZA2 
UniProtKBM8PHP8SubName: Full=Protein AraJ;
InterProM8PHP8 
PFAMM8PHP8 
ProdomM8PHP8 
UniProtKBN2IMB2SubName: Full=Protein AraJ;
InterProN2IMB2 
PFAMN2IMB2 
ProdomN2IMB2 
UniProtKBN2QWW8SubName: Full=Protein AraJ {ECO:0000313|EMBL:ENB15968.1};
InterProN2QWW8 
PFAMN2QWW8 
ProdomN2QWW8 
UniProtKBH0Q6T6SubName: Full=Predicted transporter;
InterProH0Q6T6 
PFAMH0Q6T6 
ProdomH0Q6T6 
UniProtKBN3ME86SubName: Full=Protein AraJ;
InterProN3ME86 
PFAMN3ME86 
ProdomN3ME86 
UniProtKBN2TFI5SubName: Full=Protein AraJ;
InterProN2TFI5 
PFAMN2TFI5 
ProdomN2TFI5 
UniProtKBH4UW27SubName: Full=Major Facilitator Superfamily protein {ECO:0000313|EMBL:EHV64662.1};
InterProH4UW27 
PFAMH4UW27 
ProdomH4UW27 
UniProtKBH4VSK5SubName: Full=Protein AraJ;
InterProH4VSK5 
PFAMH4VSK5 
ProdomH4VSK5 
UniProtKBH4W6J5SubName: Full=Major Facilitator Superfamily protein;
InterProH4W6J5 
PFAMH4W6J5 
ProdomH4W6J5 
UniProtKBK3IE80SubName: Full=Protein AraJ;
InterProK3IE80 
PFAMK3IE80 
ProdomK3IE80 
UniProtKBK5GZS1SubName: Full=Protein AraJ;
InterProK5GZS1 
PFAMK5GZS1 
ProdomK5GZS1 
UniProtKBM8MRW7SubName: Full=Protein AraJ;
InterProM8MRW7 
PFAMM8MRW7 
ProdomM8MRW7 
UniProtKBM8NDZ8SubName: Full=Protein AraJ;
InterProM8NDZ8 
PFAMM8NDZ8 
ProdomM8NDZ8 
UniProtKBN3AS70SubName: Full=Protein AraJ;
InterProN3AS70 
PFAMN3AS70 
ProdomN3AS70 
UniProtKBN2WXS1SubName: Full=Protein AraJ;
InterProN2WXS1 
PFAMN2WXS1 
ProdomN2WXS1 
UniProtKBN2VAU9SubName: Full=Protein AraJ;
InterProN2VAU9 
PFAMN2VAU9 
ProdomN2VAU9 
UniProtKBN2V4B1SubName: Full=Protein AraJ;
InterProN2V4B1 
PFAMN2V4B1 
ProdomN2V4B1 
UniProtKBN2RSJ3SubName: Full=Protein AraJ;
InterProN2RSJ3 
PFAMN2RSJ3 
ProdomN2RSJ3 
UniProtKBA0A6B8X1G6SubName: Full=MFS transporter {ECO:0000313|EMBL:QGU65594.1}
InterProA0A6B8X1G6 
PFAMA0A6B8X1G6 
ProdomA0A6B8X1G6 
UniProtKBE3PFL2SubName: Full=Major facilitator superfamily protein;
InterProE3PFL2 
PFAME3PFL2 
ProdomE3PFL2 
UniProtKBD8AL74SubName: Full=Transporter, major facilitator family protein;
InterProD8AL74 
PFAMD8AL74 
ProdomD8AL74 
UniProtKBE6B5Y5SubName: Full=Protein araJ;
InterProE6B5Y5 
PFAME6B5Y5 
ProdomE6B5Y5 
UniProtKBG2CG38SubName: Full=Protein araJ;
InterProG2CG38 
PFAMG2CG38 
ProdomG2CG38 
UniProtKBA0A7B5MC26SubName: Full=MFS transporter AraJ {ECO:0000313|EMBL:HAJ6402504.1}
InterProA0A7B5MC26 
PFAMA0A7B5MC26 
ProdomA0A7B5MC26 
UniProtKBA0A7Z8FG76SubName: Full=MFS transporter AraJ {ECO:0000313|EMBL:TFB45951.1}
InterProA0A7Z8FG76 
PFAMA0A7Z8FG76 
ProdomA0A7Z8FG76 
UniProtKBF9R1J8SubName: Full=MFS transport protein AraJ;
InterProF9R1J8 
PFAMF9R1J8 
ProdomF9R1J8 
UniProtKBA0A828R5Z5SubName: Full=Protein araJ {ECO:0000313|EMBL:EFU97283.1}
InterProA0A828R5Z5 
PFAMA0A828R5Z5 
ProdomA0A828R5Z5 
UniProtKBE2WRD9SubName: Full=Protein araJ;
InterProE2WRD9 
PFAME2WRD9 
ProdomE2WRD9 
UniProtKBA0A5Q3TL46SubName: Full=MFS transporter AraJ {ECO:0000313|EMBL:QGL44600.1}
InterProA0A5Q3TL46 
PFAMA0A5Q3TL46 
ProdomA0A5Q3TL46 
UniProtKBB1J053SubName: Full=Major facilitator superfamily MFS_1;Flags: Precursor;
InterProB1J053 
PFAMB1J053 
ProdomB1J053 
UniProtKBB1XEY4SubName: Full=Predicted transporter;
InterProB1XEY4 
PFAMB1XEY4 
ProdomB1XEY4 
UniProtKBH4UW27SubName: Full=Major Facilitator Superfamily protein;
InterProH4UW27 
PFAMH4UW27 
ProdomH4UW27 
UniProtKBC4ZTF3SubName: Full=Predicted transporter;
InterProC4ZTF3 
PFAMC4ZTF3 
ProdomC4ZTF3 
UniProtKBH4W6J5SubName: Full=Major Facilitator Superfamily protein;
InterProH4W6J5 
PFAMH4W6J5 
ProdomH4W6J5 
UniProtKBA2UI88Major facilitator superfamily MFS_1 precursor.
InterProA2UI88 
PFAMA2UI88 
ProdomA2UI88 
UniProtKBI2I2Z0SubName: Full=MFS transport protein AraJ;
InterProI2I2Z0 
PFAMI2I2Z0 
ProdomI2I2Z0 
UniProtKBE1HRW4SubName: Full=Transporter, major facilitator family protein;
InterProE1HRW4 
PFAME1HRW4 
ProdomE1HRW4 
UniProtKBG0FC90SubName: Full=Protein araJ;
InterProG0FC90 
PFAMG0FC90 
ProdomG0FC90