University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P24211
Original Database ID UP P24211
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation recname: full=putative protein
rhse;
Sequence Length 682

Dataset Information:

The newest dataset for this sequence was created on 2011-08-28. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region1-435
Protein Length682
Template PDB Code2gskA
Template Region130-541
Sequence Identity14%
E-Value0.044
GA3410
MPQS0.49443
z-DOPE1.68
TSVMod MethodMSALL
TSVMod RMSD26.475
TSVMod NO350.019
Datasete_coli_83333_B1
ModPipe VersionSVN.r1372
Model Date2011-08-28

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2gskstructure of the btub:tonb complex
DBALI2gskA 
CATH2.40.170.20 Domain: 2gskA02 Maltoporin; Chain A (89%)
JenaImageLibrary2gsk 
Target Sequence
UniProtKBP77471RecName: Full=Putative protein RhsE;
InterProP77471 
PFAMP77471 
ProdomP77471 
UniProtKBC9QW09SubName: Full=RHS protein;
InterProC9QW09 
PFAMC9QW09 
ProdomC9QW09 
UniProtKBP76869RecName: Full=Putative protein RhsE;
InterProP76869 
PFAMP76869 
ProdomP76869 
UniProtKBA0A0A0FQW5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KGM81932.1};
InterProA0A0A0FQW5 
PFAMA0A0A0FQW5 
ProdomA0A0A0FQW5 
UniProtKBP24211RecName: Full=Putative protein RhsE;
InterProP24211 
PFAMP24211 
ProdomP24211 
UniProtKBG0FFD0SubName: Full=Protein rhsE {ECO:0000313|EMBL:AEJ56504.1};
InterProG0FFD0 
PFAMG0FFD0 
ProdomG0FFD0 
UniProtKBG0FFD0SubName: Full=Protein rhsE;
InterProG0FFD0 
PFAMG0FFD0 
ProdomG0FFD0 
UniProtKBC9QW09SubName: Full=RHS protein;
InterProC9QW09 
PFAMC9QW09 
ProdomC9QW09 
UniProtKBP24211.3RHSE_ECOLI RecName: Full=Putative protein rhsE
InterProP24211.3 
PFAMP24211.3 
ProdomP24211.3 
UniProtKBP76869RecName: Full=Putative protein RhsE;
InterProP76869 
PFAMP76869 
ProdomP76869 
UniProtKBP77471RecName: Full=Putative protein RhsE;
InterProP77471 
PFAMP77471 
ProdomP77471 
UniProtKBP24211RecName: Full=Putative protein RhsE;
InterProP24211 
PFAMP24211 
ProdomP24211 
RefSeqAP_002079.1 rhsE element core protein RshE [Escherichia coli str. K-12 substr. W3110]
GenPept1742368rhsE element core protein RshE
GenPept1742376RhsE protein (fragment)
GenPept1787728rhsE element core protein RshE
GenPept2507113RHSE_ECOLI RecName: Full=Putative protein rhsE
GenPept260449418RHS protein
GenPept664683798protein RhsE
GenPept7466908C64898 rhsE protein - Escherichia coli
GenPept89108299 rhsE element core protein RshE [Escherichia coli str. K-12 substr. W3110]
GenPept16129415 (NC_000913) rhsE protein in rhs element [Escherichia coli K12]
GenBankACX39840.1 RHS protein [Escherichia coli DH1]