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ModBase: Database of Comparative Protein Structure Models

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Sequence Information

Primary Database Link P29013
Original Database ID ref NP_415706.1
Organism Escherichia coli, Shigella boydii, etc.
Annotation recname: full=uncharacterized
protein ycgb;
Sequence Length 510

Dataset Information:

The newest dataset for this sequence was created on 2011-08-28. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region161-363
Protein Length510
Template PDB Code2iw3A
Template Region2-192
Sequence Identity9%
E-Value0
GA3410.02
MPQS0.0746392
z-DOPE-0.01
TSVMod MethodMTALL
TSVMod RMSD19.543
TSVMod NO350.049
Datasete_coli_83333_B1
ModPipe VersionSVN.r1372
Model Date2011-08-28

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Sequence Model Coverage Summary
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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2iw3elongation factor 3
DBALI2iw3A 
JenaImageLibrary2iw3 
Target Sequence
UniProtKBE1JB38SubName: Full=SpoVR family protein {ECO:0000313|EMBL:EFK66902.1};
InterProE1JB38 
PFAME1JB38 
ProdomE1JB38 
UniProtKBA0A069XGQ4SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KDU26653.1};
InterProA0A069XGQ4 
PFAMA0A069XGQ4 
ProdomA0A069XGQ4 
UniProtKBA0A069XKA3SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KDU30384.1};
InterProA0A069XKA3 
PFAMA0A069XKA3 
ProdomA0A069XKA3 
UniProtKBA0A070FG84SubName: Full=SpoVR family protein {ECO:0000313|EMBL:KDV64940.1};
InterProA0A070FG84 
PFAMA0A070FG84 
ProdomA0A070FG84 
UniProtKBA0A070T238SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KDX20083.1};
InterProA0A070T238 
PFAMA0A070T238 
ProdomA0A070T238 
UniProtKBA0A070ULH5SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KDX43142.1};
InterProA0A070ULH5 
PFAMA0A070ULH5 
ProdomA0A070ULH5 
UniProtKBA0A070YJ79SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KDX87068.1};
InterProA0A070YJ79 
PFAMA0A070YJ79 
ProdomA0A070YJ79 
UniProtKBA0A071DHV7SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KDZ41044.1};
InterProA0A071DHV7 
PFAMA0A071DHV7 
ProdomA0A071DHV7 
UniProtKBA0A073FZ97SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KEJ49388.1};
InterProA0A073FZ97 
PFAMA0A073FZ97 
ProdomA0A073FZ97 
UniProtKBA0A073GXC3SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KEJ69645.1};
InterProA0A073GXC3 
PFAMA0A073GXC3 
ProdomA0A073GXC3 
UniProtKBA0A073TD83SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KEL24706.1};
InterProA0A073TD83 
PFAMA0A073TD83 
ProdomA0A073TD83 
UniProtKBA0A029KXN7SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:EZJ77869.1};
InterProA0A029KXN7 
PFAMA0A029KXN7 
ProdomA0A029KXN7 
UniProtKBA0A028E6D1SubName: Full=SpoVR family protein {ECO:0000313|EMBL:EZE55420.1};
InterProA0A028E6D1 
PFAMA0A028E6D1 
ProdomA0A028E6D1 
UniProtKBA7ZKV9SubName: Full=SpoVR family protein {ECO:0000313|EMBL:ABV17597.1};
InterProA7ZKV9 
PFAMA7ZKV9 
ProdomA7ZKV9 
UniProtKBE0IV73SubName: Full=Conserved protein {ECO:0000313|EMBL:ADT74765.1};SubName: Full=SpoVR family protein {ECO:0000313|EMBL:AFH10911.1};
InterProE0IV73 
PFAME0IV73 
ProdomE0IV73 
UniProtKBE9WRV0SubName: Full=SpoVR protein;
InterProE9WRV0 
PFAME9WRV0 
ProdomE9WRV0 
UniProtKBE9X4R3SubName: Full=SpoVR like protein;
InterProE9X4R3 
PFAME9X4R3 
ProdomE9X4R3 
UniProtKBE9XXZ7SubName: Full=SpoVR protein;
InterProE9XXZ7 
PFAME9XXZ7 
ProdomE9XXZ7 
UniProtKBE9W583SubName: Full=SpoVR protein;
InterProE9W583 
PFAME9W583 
ProdomE9W583 
UniProtKBF9CGP8SubName: Full=SpoVR family protein;
InterProF9CGP8 
PFAMF9CGP8 
ProdomF9CGP8 
UniProtKBF4ULN5SubName: Full=Putative sporulation protein;
InterProF4ULN5 
PFAMF4ULN5 
ProdomF4ULN5 
UniProtKBF9QXC9SubName: Full=SpoVR family protein;
InterProF9QXC9 
PFAMF9QXC9 
ProdomF9QXC9 
UniProtKBF4SGQ2SubName: Full=Putative sporulation protein {ECO:0000313|EMBL:EGI10732.1};
InterProF4SGQ2 
PFAMF4SGQ2 
ProdomF4SGQ2 
UniProtKBC6UG54SubName: Full=Putative uncharacterized protein ycgB;
InterProC6UG54 
PFAMC6UG54 
ProdomC6UG54 
UniProtKBA0A074I6S9SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KEO02511.1};
InterProA0A074I6S9 
PFAMA0A074I6S9 
ProdomA0A074I6S9 
UniProtKBA0A074II80SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KEO13152.1};
InterProA0A074II80 
PFAMA0A074II80 
ProdomA0A074II80 
UniProtKBC5W468SubName: Full=SpoVR family protein {ECO:0000313|EMBL:ACT29460.1};
InterProC5W468 
PFAMC5W468 
ProdomC5W468 
UniProtKBB3XBR3SubName: Full=SpoVR family protein;
InterProB3XBR3 
PFAMB3XBR3 
ProdomB3XBR3 
UniProtKBB1XA75SubName: Full=Conserved protein;
InterProB1XA75 
PFAMB1XA75 
ProdomB1XA75 
UniProtKBA7ZZC2SubName: Full=SpoVR family protein;
InterProA7ZZC2 
PFAMA7ZZC2 
ProdomA7ZZC2 
UniProtKBD2NHP9SubName: Full=Putative sporulation protein;
InterProD2NHP9 
PFAMD2NHP9 
ProdomD2NHP9 
UniProtKBC8UNU4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAI35444.1};
InterProC8UNU4 
PFAMC8UNU4 
ProdomC8UNU4 
UniProtKBD8C5K3SubName: Full=SpoVR family protein {ECO:0000313|EMBL:EFI85833.1};
InterProD8C5K3 
PFAMD8C5K3 
ProdomD8C5K3 
UniProtKBD8B0S0SubName: Full=SpoVR family protein {ECO:0000313|EMBL:EFJ67297.1};
InterProD8B0S0 
PFAMD8B0S0 
ProdomD8B0S0 
UniProtKBD8EKV4SubName: Full=SpoVR family protein {ECO:0000313|EMBL:EFK51711.1};
InterProD8EKV4 
PFAMD8EKV4 
ProdomD8EKV4 
UniProtKBE1I0W8SubName: Full=SpoVR family protein {ECO:0000313|EMBL:EFK74041.1};
InterProE1I0W8 
PFAME1I0W8 
ProdomE1I0W8 
UniProtKBB6I9P9SubName: Full=Putative sporulation protein {ECO:0000313|EMBL:BAG76760.1};
InterProB6I9P9 
PFAMB6I9P9 
ProdomB6I9P9 
UniProtKBB7LGU8SubName: Full=YcgB protein {ECO:0000313|EMBL:CAU97142.1};
InterProB7LGU8 
PFAMB7LGU8 
ProdomB7LGU8 
UniProtKBB2NBS9SubName: Full=SpoVR family protein;
InterProB2NBS9 
PFAMB2NBS9 
ProdomB2NBS9 
UniProtKBA0A079DJQ6SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KDY22274.1};
InterProA0A079DJQ6 
PFAMA0A079DJQ6 
ProdomA0A079DJQ6 
UniProtKBA0A079F9M5SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KDY54692.1};
InterProA0A079F9M5 
PFAMA0A079F9M5 
ProdomA0A079F9M5 
UniProtKBA0A080FZK6SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KEN71507.1};
InterProA0A080FZK6 
PFAMA0A080FZK6 
ProdomA0A080FZK6 
UniProtKBA0A080GP60SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KEN91357.1};
InterProA0A080GP60 
PFAMA0A080GP60 
ProdomA0A080GP60 
UniProtKBA0A0A8UA73SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CEK04409.1};
InterProA0A0A8UA73 
PFAMA0A0A8UA73 
ProdomA0A0A8UA73 
UniProtKBA0A0E0Y1N9SubName: Full=SpoVR family protein {ECO:0000313|EMBL:AFS74824.1};
InterProA0A0E0Y1N9 
PFAMA0A0E0Y1N9 
ProdomA0A0E0Y1N9 
UniProtKBA0A0E1ZUN8SubName: Full=SpoVR family protein {ECO:0000313|EMBL:EIL35341.1};
InterProA0A0E1ZUN8 
PFAMA0A0E1ZUN8 
ProdomA0A0E1ZUN8 
UniProtKBA0A0E2TQT7SubName: Full=SpoVR family protein {ECO:0000313|EMBL:EYV12024.1};
InterProA0A0E2TQT7 
PFAMA0A0E2TQT7 
ProdomA0A0E2TQT7 
UniProtKBA0A0E3KEZ0SubName: Full=Uncharacterized protein YcgB {ECO:0000313|EMBL:AKA90193.1};
InterProA0A0E3KEZ0 
PFAMA0A0E3KEZ0 
ProdomA0A0E3KEZ0 
UniProtKBA0A0F6GMM8SubName: Full=Putative sporulation protein {ECO:0000313|EMBL:BAI54673.1};
InterProA0A0F6GMM8 
PFAMA0A0F6GMM8 
ProdomA0A0F6GMM8 
UniProtKBE1IMT7SubName: Full=SpoVR family protein {ECO:0000313|EMBL:EFO59441.1};
InterProE1IMT7 
PFAME1IMT7 
ProdomE1IMT7 
UniProtKBE1HU51SubName: Full=SpoVR family protein {ECO:0000313|EMBL:EFK88553.1};
InterProE1HU51 
PFAME1HU51 
ProdomE1HU51 
UniProtKBA0A025FQD2SubName: Full=SpoVR family protein {ECO:0000313|EMBL:EYV53516.1};
InterProA0A025FQD2 
PFAMA0A025FQD2 
ProdomA0A025FQD2 
UniProtKBG0D8D2SubName: Full=SpoVR family protein;
InterProG0D8D2 
PFAMG0D8D2 
ProdomG0D8D2 
UniProtKBA0A028AA40SubName: Full=SpoVR family protein {ECO:0000313|EMBL:EZE07715.1};
InterProA0A028AA40 
PFAMA0A028AA40 
ProdomA0A028AA40 
UniProtKBA0A069YZ68SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KDU52483.1};
InterProA0A069YZ68 
PFAMA0A069YZ68 
ProdomA0A069YZ68 
UniProtKBA0A071BWT1SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KDY87704.1};
InterProA0A071BWT1 
PFAMA0A071BWT1 
ProdomA0A071BWT1 
UniProtKBA0A073W172SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KEL86393.1};
InterProA0A073W172 
PFAMA0A073W172 
ProdomA0A073W172 
UniProtKBA0A080ETB4SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KEN49936.1};
InterProA0A080ETB4 
PFAMA0A080ETB4 
ProdomA0A080ETB4 
UniProtKBA0A0E1LYA2SubName: Full=SpoVR family stationary phase protein {ECO:0000313|EMBL:AJF56058.1};
InterProA0A0E1LYA2 
PFAMA0A0E1LYA2 
ProdomA0A0E1LYA2 
UniProtKBB3IR53SubName: Full=SpoVR family protein;
InterProB3IR53 
PFAMB3IR53 
ProdomB3IR53 
UniProtKBC6EGS9SubName: Full=SpoVR family protein {ECO:0000313|EMBL:ACT29460.1};
InterProC6EGS9 
PFAMC6EGS9 
ProdomC6EGS9 
UniProtKBD7ZPG9SubName: Full=SpoVR family protein {ECO:0000313|EMBL:EFK27231.1};
InterProD7ZPG9 
PFAMD7ZPG9 
ProdomD7ZPG9 
UniProtKBE9YAF2SubName: Full=SpoVR protein {ECO:0000313|EMBL:EGB68602.1};
InterProE9YAF2 
PFAME9YAF2 
ProdomE9YAF2 
UniProtKBE6BLV7SubName: Full=SpoVR family protein {ECO:0000313|EMBL:EFU34825.1};
InterProE6BLV7 
PFAME6BLV7 
ProdomE6BLV7 
UniProtKBD7YCA0SubName: Full=SpoVR family protein {ECO:0000313|EMBL:EFK05087.1};
InterProD7YCA0 
PFAMD7YCA0 
ProdomD7YCA0 
UniProtKBA0A026GPJ3SubName: Full=SpoVR family protein {ECO:0000313|EMBL:EYY72632.1};
InterProA0A026GPJ3 
PFAMA0A026GPJ3 
ProdomA0A026GPJ3 
UniProtKBD6HVR0SubName: Full=YcgB protein {ECO:0000313|EMBL:EFE63747.2};
InterProD6HVR0 
PFAMD6HVR0 
ProdomD6HVR0 
UniProtKBA0A026V851SubName: Full=SpoVR family protein {ECO:0000313|EMBL:EZA38128.1};
InterProA0A026V851 
PFAMA0A026V851 
ProdomA0A026V851 
UniProtKBA0A079FTE0SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KDY65110.1};
InterProA0A079FTE0 
PFAMA0A079FTE0 
ProdomA0A079FTE0 
UniProtKBC9QY09SubName: Full=SpoVR family protein;
InterProC9QY09 
PFAMC9QY09 
ProdomC9QY09 
UniProtKBE9WDL7SubName: Full=SpoVR like protein;
InterProE9WDL7 
PFAME9WDL7 
ProdomE9WDL7 
UniProtKBA0A027U3U1SubName: Full=SpoVR family protein {ECO:0000313|EMBL:EZD32281.1};
InterProA0A027U3U1 
PFAMA0A027U3U1 
ProdomA0A027U3U1 
UniProtKBA0A071ALU8SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KDY63188.1};
InterProA0A071ALU8 
PFAMA0A071ALU8 
ProdomA0A071ALU8 
UniProtKBA0A079H509SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KDY96131.1};
InterProA0A079H509 
PFAMA0A079H509 
ProdomA0A079H509 
UniProtKBA0A0H3X7W3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKM34736.1};
InterProA0A0H3X7W3 
PFAMA0A0H3X7W3 
ProdomA0A0H3X7W3 
UniProtKBD8AVU4SubName: Full=SpoVR family protein {ECO:0000313|EMBL:EFK12716.1};
InterProD8AVU4 
PFAMD8AVU4 
ProdomD8AVU4 
UniProtKBE8YDD8SubName: Full=SpoVR family protein {ECO:0000313|EMBL:ADX51267.1};
InterProE8YDD8 
PFAME8YDD8 
ProdomE8YDD8 
UniProtKBA0A080FH95SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KEN58002.1};
InterProA0A080FH95 
PFAMA0A080FH95 
ProdomA0A080FH95 
UniProtKBA0A080IIF0SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KEO26713.1};
InterProA0A080IIF0 
PFAMA0A080IIF0 
ProdomA0A080IIF0 
UniProtKBA0A0E1T1M9SubName: Full=SpoVR family protein {ECO:0000313|EMBL:EDU65810.1};
InterProA0A0E1T1M9 
PFAMA0A0E1T1M9 
ProdomA0A0E1T1M9 
UniProtKBA0A0E2UE84SubName: Full=SpoVR family protein {ECO:0000313|EMBL:EZE18783.1};
InterProA0A0E2UE84 
PFAMA0A0E2UE84 
ProdomA0A0E2UE84 
UniProtKBB3IDS8SubName: Full=SpoVR family protein;
InterProB3IDS8 
PFAMB3IDS8 
ProdomB3IDS8 
UniProtKBB7LXA2SubName: Full=Uncharacterized protein;
InterProB7LXA2 
PFAMB7LXA2 
ProdomB7LXA2 
UniProtKBC4ZTM9SubName: Full=Conserved protein;
InterProC4ZTM9 
PFAMC4ZTM9 
ProdomC4ZTM9 
UniProtKBB1IUA4SubName: Full=SpoVR family protein;
InterProB1IUA4 
PFAMB1IUA4 
ProdomB1IUA4 
UniProtKBD7XUV0SubName: Full=SpoVR family protein {ECO:0000313|EMBL:EFJ84880.1};
InterProD7XUV0 
PFAMD7XUV0 
ProdomD7XUV0 
UniProtKBD8E330SubName: Full=SpoVR family protein {ECO:0000313|EMBL:EFK47413.1};
InterProD8E330 
PFAMD8E330 
ProdomD8E330 
UniProtKBA0A075L2V4SubName: Full=Stage V sporulation protein involved in spore cortex synthesis (SpoVR) {ECO:0000313|EMBL:AIF60262.1};
InterProA0A075L2V4 
PFAMA0A075L2V4 
ProdomA0A075L2V4 
UniProtKBA0A074HY53SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KEO00102.1};
InterProA0A074HY53 
PFAMA0A074HY53 
ProdomA0A074HY53 
UniProtKBA0A073GGM3SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KEJ63774.1};
InterProA0A073GGM3 
PFAMA0A073GGM3 
ProdomA0A073GGM3 
UniProtKBC8TQK0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAI25000.1};
InterProC8TQK0 
PFAMC8TQK0 
ProdomC8TQK0 
UniProtKBF4NHA9SubName: Full=SpoVR family protein {ECO:0000313|EMBL:EGJ05322.1};
InterProF4NHA9 
PFAMF4NHA9 
ProdomF4NHA9 
UniProtKBF4VDK0SubName: Full=Putative sporulation protein {ECO:0000313|EMBL:EGI46951.1};
InterProF4VDK0 
PFAMF4VDK0 
ProdomF4VDK0 
UniProtKBE9TJ04SubName: Full=SpoVR family protein {ECO:0000313|EMBL:EGB86786.1};
InterProE9TJ04 
PFAME9TJ04 
ProdomE9TJ04 
UniProtKBA0A028C6M1SubName: Full=SpoVR family protein {ECO:0000313|EMBL:EZE31178.1};
InterProA0A028C6M1 
PFAMA0A028C6M1 
ProdomA0A028C6M1 
UniProtKBA0A029MXK2SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:EZK02335.1};
InterProA0A029MXK2 
PFAMA0A029MXK2 
ProdomA0A029MXK2 
UniProtKBA0A070DJ56SubName: Full=SpoVR family protein {ECO:0000313|EMBL:KDV38284.1};
InterProA0A070DJ56 
PFAMA0A070DJ56 
ProdomA0A070DJ56 
UniProtKBA0A070U2A9SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KDX35955.1};
InterProA0A070U2A9 
PFAMA0A070U2A9 
ProdomA0A070U2A9 
UniProtKBA0A071CBI5SubName: Full=SpoVR like family protein {ECO:0000313|EMBL:KDZ16407.1};
InterProA0A071CBI5 
PFAMA0A071CBI5 
ProdomA0A071CBI5 
UniProtKBC8U6V0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAI30124.1};
InterProC8U6V0 
PFAMC8U6V0 
ProdomC8U6V0