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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P30015.2
Original Database ID ref NP_416170.1
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation lhr_ecoli recname: full=probable
atp-dependent helicase lhr; altname:
full=large helicase-related protein
Sequence Length 1538

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region7-489
Protein Length1538
Template PDB Code2xgjB
Template Region126-618
Sequence Identity20%
E-Value0
GA3411
MPQS0.363544
z-DOPE0.62
TSVMod MethodMSALL
TSVMod RMSD10.207
TSVMod NO350.452
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2xgjstructure of mtr4, a dexh helicase involved in nuclear rna processing and surveillance
DBALI2xgjB 
JenaImageLibrary2xgj 
Target Sequence
UniProtKBG2B9Q3SubName: Full=Putative ATP-dependent helicase lhr;EC=3.6.1.-;
InterProG2B9Q3 
PFAMG2B9Q3 
ProdomG2B9Q3 
UniProtKBA0A071C8V1SubName: Full=Helicase conserved C-terminal domain protein {ECO:0000313|EMBL:KDZ13282.1};
InterProA0A071C8V1 
PFAMA0A071C8V1 
ProdomA0A071C8V1 
UniProtKBA0A071C1N4SubName: Full=Helicase conserved C-terminal domain protein {ECO:0000313|EMBL:KDY91543.1};
InterProA0A071C1N4 
PFAMA0A071C1N4 
ProdomA0A071C1N4 
UniProtKBA0A071B1U3SubName: Full=Helicase conserved C-terminal domain protein {ECO:0000313|EMBL:KDY64588.1};
InterProA0A071B1U3 
PFAMA0A071B1U3 
ProdomA0A071B1U3 
UniProtKBA0A024L1N1SubName: Full=ATP-dependent helicase {ECO:0000313|EMBL:AJB51773.1};SubName: Full=ATP-dependent helicase Lhr and Lhr-like helicase {ECO:0000313|EMBL:KGM69844.1};EC=3.6.1.- {ECO:0000313|EMBL:KGM69844.1}
InterProA0A024L1N1 
PFAMA0A024L1N1 
ProdomA0A024L1N1 
UniProtKBT9MFJ1SubName: Full=ATP-dependent helicase;
InterProT9MFJ1 
PFAMT9MFJ1 
ProdomT9MFJ1 
UniProtKBT8Z5D1SubName: Full=ATP-dependent helicase;
InterProT8Z5D1 
PFAMT8Z5D1 
ProdomT8Z5D1 
UniProtKBT8YA07SubName: Full=ATP-dependent helicase {ECO:0000313|EMBL:EQX53205.1};
InterProT8YA07 
PFAMT8YA07 
ProdomT8YA07 
UniProtKBT2N340SubName: Full=Uncharacterized protein;
InterProT2N340 
PFAMT2N340 
ProdomT2N340 
UniProtKBS1P6N1SubName: Full=ATP-dependent helicase;
InterProS1P6N1 
PFAMS1P6N1 
ProdomS1P6N1 
UniProtKBS1KT74SubName: Full=ATP-dependent helicase;
InterProS1KT74 
PFAMS1KT74 
ProdomS1KT74 
UniProtKBS1K6V8SubName: Full=ATP-dependent helicase;
InterProS1K6V8 
PFAMS1K6V8 
ProdomS1K6V8 
UniProtKBS0ZN38SubName: Full=ATP-dependent helicase;
InterProS0ZN38 
PFAMS0ZN38 
ProdomS0ZN38 
UniProtKBS0XZW2SubName: Full=ATP-dependent helicase;
InterProS0XZW2 
PFAMS0XZW2 
ProdomS0XZW2 
UniProtKBM2MZ49SubName: Full=ATP-dependent helicase Lhr;
InterProM2MZ49 
PFAMM2MZ49 
ProdomM2MZ49 
UniProtKBL8BYB8SubName: Full=Probable ATP-dependent helicase lhr;
InterProL8BYB8 
PFAML8BYB8 
ProdomL8BYB8 
UniProtKBL4P2J1SubName: Full=ATP-dependent helicase;
InterProL4P2J1 
PFAML4P2J1 
ProdomL4P2J1 
UniProtKBL3ZXE9SubName: Full=ATP-dependent helicase;
InterProL3ZXE9 
PFAML3ZXE9 
ProdomL3ZXE9 
UniProtKBA0A079DT84SubName: Full=Helicase conserved C-terminal domain protein {ECO:0000313|EMBL:KDY23666.1};
InterProA0A079DT84 
PFAMA0A079DT84 
ProdomA0A079DT84 
UniProtKBA0A079FCF0SubName: Full=Helicase conserved C-terminal domain protein {ECO:0000313|EMBL:KDY54545.1};
InterProA0A079FCF0 
PFAMA0A079FCF0 
ProdomA0A079FCF0 
UniProtKBG2AV15SubName: Full=Putative ATP-dependent helicase lhr;EC=3.6.1.-;
InterProG2AV15 
PFAMG2AV15 
ProdomG2AV15 
UniProtKBF9R1Y9SubName: Full=Putative ATP-dependent helicase Lhr;
InterProF9R1Y9 
PFAMF9R1Y9 
ProdomF9R1Y9 
UniProtKBF4SJR4SubName: Full=Member of ATP-dependent helicase superfamily II {ECO:0000313|EMBL:EGI11266.1};
InterProF4SJR4 
PFAMF4SJR4 
ProdomF4SJR4 
UniProtKBH4VGC0SubName: Full=DEAD/DEAH box helicase family protein;
InterProH4VGC0 
PFAMH4VGC0 
ProdomH4VGC0 
UniProtKBE9WXP7SubName: Full=DEAD/H protein;
InterProE9WXP7 
PFAME9WXP7 
ProdomE9WXP7 
UniProtKBE9WF05SubName: Full=DEAD/H protein;
InterProE9WF05 
PFAME9WF05 
ProdomE9WF05 
UniProtKBE3PMN0SubName: Full=Probable ATP-dependent helicase {ECO:0000313|EMBL:CBJ01192.1};
InterProE3PMN0 
PFAME3PMN0 
ProdomE3PMN0 
UniProtKBE1HTA4SubName: Full=DEAD/DEAH box helicase {ECO:0000313|EMBL:EFK88829.1};
InterProE1HTA4 
PFAME1HTA4 
ProdomE1HTA4 
UniProtKBC9QUT0SubName: Full=DEAD/H associated domain protein;SubName: Full=Putative ATP-dependent helicase Lhr;
InterProC9QUT0 
PFAMC9QUT0 
ProdomC9QUT0 
UniProtKBC4ZYB6SubName: Full=Predicted ATP-dependent helicase;
InterProC4ZYB6 
PFAMC4ZYB6 
ProdomC4ZYB6 
UniProtKBB1XFW4SubName: Full=Predicted ATP-dependent helicase;
InterProB1XFW4 
PFAMB1XFW4 
ProdomB1XFW4 
UniProtKBG2CKB4SubName: Full=Putative ATP-dependent helicase lhr;EC=3.6.1.-;
InterProG2CKB4 
PFAMG2CKB4 
ProdomG2CKB4 
UniProtKBH0QA74SubName: Full=Predicted ATP-dependent helicase;
InterProH0QA74 
PFAMH0QA74 
ProdomH0QA74 
UniProtKBG2EYF1SubName: Full=Putative ATP-dependent helicase Lhr;
InterProG2EYF1 
PFAMG2EYF1 
ProdomG2EYF1 
UniProtKBA0A0G3HH72SubName: Full=Putative ATP-dependent helicase protein {ECO:0000313|EMBL:AKK12666.1};
InterProA0A0G3HH72 
PFAMA0A0G3HH72 
ProdomA0A0G3HH72 
UniProtKBA0A0E1LXS1SubName: Full=Putative ATP-dependent helicase {ECO:0000313|EMBL:AJF56505.1};
InterProA0A0E1LXS1 
PFAMA0A0E1LXS1 
ProdomA0A0E1LXS1 
UniProtKBA0A079FRG5SubName: Full=Helicase conserved C-terminal domain protein {ECO:0000313|EMBL:KDY65626.1};
InterProA0A079FRG5 
PFAMA0A079FRG5 
ProdomA0A079FRG5 
UniProtKBL3TNY3SubName: Full=ATP-dependent helicase;
InterProL3TNY3 
PFAML3TNY3 
ProdomL3TNY3 
UniProtKBL2Z947SubName: Full=ATP-dependent helicase;
InterProL2Z947 
PFAML2Z947 
ProdomL2Z947 
UniProtKBP30015RecName: Full=Probable ATP-dependent helicase lhr;EC=3.6.4.-;AltName: Full=Large helicase-related protein;
InterProP30015 
PFAMP30015 
ProdomP30015 
UniProtKBL4WJ93SubName: Full=ATP-dependent helicase;
InterProL4WJ93 
PFAML4WJ93 
ProdomL4WJ93 
UniProtKBL3VRZ0SubName: Full=ATP-dependent helicase;
InterProL3VRZ0 
PFAML3VRZ0 
ProdomL3VRZ0 
UniProtKBL3QX49SubName: Full=ATP-dependent helicase;
InterProL3QX49 
PFAML3QX49 
ProdomL3QX49 
UniProtKBK3HV06SubName: Full=Member of ATP-dependent helicase superfamily II;EC=3.6.4.-;
InterProK3HV06 
PFAMK3HV06 
ProdomK3HV06 
UniProtKBI2I8P1SubName: Full=Putative ATP-dependent helicase Lhr;
InterProI2I8P1 
PFAMI2I8P1 
ProdomI2I8P1 
UniProtKBT7KEU2SubName: Full=ATP-dependent helicase;
InterProT7KEU2 
PFAMT7KEU2 
ProdomT7KEU2 
UniProtKBT9TV29SubName: Full=ATP-dependent helicase;
InterProT9TV29 
PFAMT9TV29 
ProdomT9TV29 
UniProtKBS1EI72SubName: Full=ATP-dependent helicase;
InterProS1EI72 
PFAMS1EI72 
ProdomS1EI72 
UniProtKBL3VE80SubName: Full=ATP-dependent helicase;
InterProL3VE80 
PFAML3VE80 
ProdomL3VE80 
UniProtKBT9NE68SubName: Full=ATP-dependent helicase;
InterProT9NE68 
PFAMT9NE68 
ProdomT9NE68 
UniProtKBS1CYB8SubName: Full=ATP-dependent helicase;
InterProS1CYB8 
PFAMS1CYB8 
ProdomS1CYB8 
UniProtKBM7UQ58SubName: Full=Putative ATP-dependent helicase;
InterProM7UQ58 
PFAMM7UQ58 
ProdomM7UQ58 
UniProtKBS0ZY89SubName: Full=ATP-dependent helicase;
InterProS0ZY89 
PFAMS0ZY89 
ProdomS0ZY89 
UniProtKBL3LEA5SubName: Full=ATP-dependent helicase;
InterProL3LEA5 
PFAML3LEA5 
ProdomL3LEA5 
UniProtKBS0UWN0SubName: Full=ATP-dependent helicase;
InterProS0UWN0 
PFAMS0UWN0 
ProdomS0UWN0 
UniProtKBS1I5M3SubName: Full=ATP-dependent helicase {ECO:0000313|EMBL:EOW15006.1};
InterProS1I5M3 
PFAMS1I5M3 
ProdomS1I5M3 
UniProtKBI2YN00SubName: Full=DEAD/H associated;
InterProI2YN00 
PFAMI2YN00 
ProdomI2YN00 
UniProtKBI2ZU23SubName: Full=DEAD/H associated;
InterProI2ZU23 
PFAMI2ZU23 
ProdomI2ZU23 
UniProtKBL3KQE5SubName: Full=ATP-dependent helicase {ECO:0000313|EMBL:ELE00622.1};
InterProL3KQE5 
PFAML3KQE5 
ProdomL3KQE5 
UniProtKBL3RHD5SubName: Full=ATP-dependent helicase;
InterProL3RHD5 
PFAML3RHD5 
ProdomL3RHD5 
UniProtKBI2R1W1SubName: Full=Uncharacterized protein;
InterProI2R1W1 
PFAMI2R1W1 
ProdomI2R1W1 
UniProtKBS1LWI8SubName: Full=ATP-dependent helicase;
InterProS1LWI8 
PFAMS1LWI8 
ProdomS1LWI8 
UniProtKBT8A6G1SubName: Full=ATP-dependent helicase;
InterProT8A6G1 
PFAMT8A6G1 
ProdomT8A6G1 
UniProtKBT8ZRA6SubName: Full=ATP-dependent helicase;
InterProT8ZRA6 
PFAMT8ZRA6 
ProdomT8ZRA6 
UniProtKBI2P7B4SubName: Full=Uncharacterized protein;
InterProI2P7B4 
PFAMI2P7B4 
ProdomI2P7B4 
UniProtKBI2R1W1SubName: Full=Uncharacterized protein;
InterProI2R1W1 
PFAMI2R1W1 
ProdomI2R1W1 
UniProtKBE1HTA4SubName: Full=DEAD/DEAH box helicase;
InterProE1HTA4 
PFAME1HTA4 
ProdomE1HTA4 
UniProtKBE3PMN0SubName: Full=Probable ATP-dependent helicase;
InterProE3PMN0 
PFAME3PMN0 
ProdomE3PMN0 
UniProtKBE9WF05SubName: Full=DEAD/H protein;
InterProE9WF05 
PFAME9WF05 
ProdomE9WF05 
UniProtKBE9WXP7SubName: Full=DEAD/H protein;
InterProE9WXP7 
PFAME9WXP7 
ProdomE9WXP7 
UniProtKBI2ZU23SubName: Full=DEAD/H associated;
InterProI2ZU23 
PFAMI2ZU23 
ProdomI2ZU23 
UniProtKBF4SJR4SubName: Full=Member of ATP-dependent helicase superfamily II;
InterProF4SJR4 
PFAMF4SJR4 
ProdomF4SJR4 
UniProtKBI2I8P1SubName: Full=Putative ATP-dependent helicase Lhr;
InterProI2I8P1 
PFAMI2I8P1 
ProdomI2I8P1 
UniProtKBF9R1Y9SubName: Full=Putative ATP-dependent helicase Lhr;
InterProF9R1Y9 
PFAMF9R1Y9 
ProdomF9R1Y9 
UniProtKBG2AV15SubName: Full=Putative ATP-dependent helicase lhr;EC=3.6.1.-;
InterProG2AV15 
PFAMG2AV15 
ProdomG2AV15 
UniProtKBG2B9Q3SubName: Full=Putative ATP-dependent helicase lhr;EC=3.6.1.-;
InterProG2B9Q3 
PFAMG2B9Q3 
ProdomG2B9Q3 
UniProtKBG2CKB4SubName: Full=Putative ATP-dependent helicase lhr;EC=3.6.1.-;
InterProG2CKB4 
PFAMG2CKB4 
ProdomG2CKB4 
UniProtKBB1XFW4SubName: Full=Predicted ATP-dependent helicase;
InterProB1XFW4 
PFAMB1XFW4 
ProdomB1XFW4 
UniProtKBC9QUT0SubName: Full=DEAD/H associated domain protein;SubName: Full=Putative ATP-dependent helicase Lhr;
InterProC9QUT0 
PFAMC9QUT0 
ProdomC9QUT0 
UniProtKBA0A5Q3T9E2SubName: Full=ATP-dependent helicase {ECO:0000313|EMBL:QGL41027.1}EC=3.6.4.- {ECO:0000313|EMBL:QGL41027.1}
InterProA0A5Q3T9E2 
PFAMA0A5Q3T9E2 
ProdomA0A5Q3T9E2 
UniProtKBA0A8F8DMU7SubName: Full=ATP-dependent helicase {ECO:0000313|EMBL:QXZ38843.1}EC=3.6.4.- {ECO:0000313|EMBL:QXZ38843.1}
InterProA0A8F8DMU7 
PFAMA0A8F8DMU7 
ProdomA0A8F8DMU7 
UniProtKBG2EYF1SubName: Full=Putative ATP-dependent helicase Lhr;
InterProG2EYF1 
PFAMG2EYF1 
ProdomG2EYF1 
UniProtKBI2YN00SubName: Full=DEAD/H associated;
InterProI2YN00 
PFAMI2YN00 
ProdomI2YN00 
UniProtKBA0A8A5HUS5SubName: Full=ATP-dependent helicase {ECO:0000313|EMBL:QTF32985.1}EC=3.6.4.- {ECO:0000313|EMBL:QTF32985.1}
InterProA0A8A5HUS5 
PFAMA0A8A5HUS5 
ProdomA0A8A5HUS5 
UniProtKBH0QA74SubName: Full=Predicted ATP-dependent helicase;
InterProH0QA74 
PFAMH0QA74 
ProdomH0QA74 
UniProtKBI2P7B4SubName: Full=Uncharacterized protein;
InterProI2P7B4 
PFAMI2P7B4 
ProdomI2P7B4 
UniProtKBH4VGC0SubName: Full=DEAD/DEAH box helicase family protein;
InterProH4VGC0 
PFAMH4VGC0 
ProdomH4VGC0 
UniProtKBA0A7B5M9V8SubName: Full=ATP-dependent helicase {ECO:0000313|EMBL:HAJ6401023.1}
InterProA0A7B5M9V8 
PFAMA0A7B5M9V8 
ProdomA0A7B5M9V8 
UniProtKBA0A8F9N6Y7SubName: Full=ATP-dependent helicase {ECO:0000313|EMBL:QYE41535.1}EC=3.6.4.- {ECO:0000313|EMBL:QYE41535.1}
InterProA0A8F9N6Y7 
PFAMA0A8F9N6Y7 
ProdomA0A8F9N6Y7 
UniProtKBA0A1X3JGF8SubName: Full=Member of ATP-dependent helicase superfamily II {ECO:0000313|EMBL:OSL08488.1}
InterProA0A1X3JGF8 
PFAMA0A1X3JGF8 
ProdomA0A1X3JGF8 
UniProtKBC4ZYB6SubName: Full=Predicted ATP-dependent helicase;
InterProC4ZYB6 
PFAMC4ZYB6 
ProdomC4ZYB6 
UniProtKBA0A8F9HEW6SubName: Full=ATP-dependent helicase {ECO:0000313|EMBL:QYE27623.1}EC=3.6.4.- {ECO:0000313|EMBL:QYE27623.1}
InterProA0A8F9HEW6 
PFAMA0A8F9HEW6 
ProdomA0A8F9HEW6 
UniProtKBP30015RecName: Full=Probable ATP-dependent helicase lhr;EC=3.6.4.-;AltName: Full=Large helicase-related protein;
InterProP30015 
PFAMP30015 
ProdomP30015 
UniProtKBP30015.2LHR_ECOLI RecName: Full=Probable ATP-dependent helicase lhr; AltName: Full=Large helicase-related protein
InterProP30015.2 
PFAMP30015.2 
ProdomP30015.2 
RefSeqZP_07247617.1 DEAD/DEAH box helicase [Escherichia coli MS 146-1]
RefSeqNP_416170.1 predicted ATP-dependent helicase [Escherichia coli str. K-12 substr. MG1655]
RefSeqYP_002926665.1 putative ATP-dependent helicase [Escherichia coli BW2952]
RefSeqZP_07497666.1 putative ATP-dependent helicase Lhr [Escherichia coli H736]
RefSeqZP_05436548.1 putative ATP-dependent helicase Lhr [Escherichia sp. 4_1_40B]
RefSeqAP_002275.1 predicted ATP-dependent helicase [Escherichia coli str. K-12 substr. W3110]