University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P30843
Original Database ID ref NP_418537.1
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation recname: full=transcriptional
regulatory protein basr;
Sequence Length 222

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region1-219
Protein Length222
Template PDB Code4s04A
Template Region1-219
Sequence Identity78%
E-Value0
GA3411
MPQS1.98609
z-DOPE-1.29
TSVMod MethodMSALL
TSVMod RMSD0.97
TSVMod NO350.953
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4s04
DBALI4s04A 
JenaImageLibrary4s04 
Target Sequence
UniProtKBQ5MNC9RecName: Full=Transcriptional regulatory protein BasR;
InterProQ5MNC9 
PFAMQ5MNC9 
ProdomQ5MNC9 
UniProtKBP30843RecName: Full=Transcriptional regulatory protein BasR;
InterProP30843 
PFAMP30843 
ProdomP30843 
UniProtKBM2N354SubName: Full=DNA-binding transcriptional regulator BasR;
InterProM2N354 
PFAMM2N354 
ProdomM2N354 
UniProtKBI0ZLW2SubName: Full=DNA-binding response regulator in two-component regulatory system with BasS;
InterProI0ZLW2 
PFAMI0ZLW2 
ProdomI0ZLW2 
UniProtKBC5A1A5SubName: Full=DNA-binding response regulator in two-component regulatory system with BasS;
InterProC5A1A5 
PFAMC5A1A5 
ProdomC5A1A5 
UniProtKBH0QFX5SubName: Full=DNA-binding response regulator in two-component regulatory system with BasS;
InterProH0QFX5 
PFAMH0QFX5 
ProdomH0QFX5 
UniProtKBC9QU86SubName: Full=DNA-binding transcriptional regulator BasR;SubName: Full=Two component transcriptional regulator, winged helix family;
InterProC9QU86 
PFAMC9QU86 
ProdomC9QU86 
UniProtKBG2F210SubName: Full=DNA-binding transcriptional regulator BasR;
InterProG2F210 
PFAMG2F210 
ProdomG2F210 
UniProtKBE8Y4P3SubName: Full=Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADX52768.1};
InterProE8Y4P3 
PFAME8Y4P3 
ProdomE8Y4P3 
UniProtKBF9R5Z9SubName: Full=DNA-binding transcriptional regulator BasR;
InterProF9R5Z9 
PFAMF9R5Z9 
ProdomF9R5Z9 
UniProtKBB1XCZ6SubName: Full=DNA-binding response regulator in two-component regulatory system with BasS;
InterProB1XCZ6 
PFAMB1XCZ6 
ProdomB1XCZ6 
UniProtKBT2G3N2SubName: Full=Transcriptional regulator;
InterProT2G3N2 
PFAMT2G3N2 
ProdomT2G3N2 
UniProtKBQ5MNF2RecName: Full=Transcriptional regulatory protein BasR;
InterProQ5MNF2 
PFAMQ5MNF2 
ProdomQ5MNF2 
UniProtKBQ2M6J1RecName: Full=Transcriptional regulatory protein BasR;
InterProQ2M6J1 
PFAMQ2M6J1 
ProdomQ2M6J1 
UniProtKBA0A094VJP3SubName: Full=PmrA protein {ECO:0000313|EMBL:CDU21915.1};SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:AKO55258.1};SubName: Full=Transcriptional regulatory protein BasR {ECO:0000313|EMBL:C
InterProA0A094VJP3 
PFAMA0A094VJP3 
ProdomA0A094VJP3 
UniProtKBQ5MNH0RecName: Full=Transcriptional regulatory protein BasR;
InterProQ5MNH0 
PFAMQ5MNH0 
ProdomQ5MNH0 
UniProtKBQ5MNE5RecName: Full=Transcriptional regulatory protein BasR;
InterProQ5MNE5 
PFAMQ5MNE5 
ProdomQ5MNE5 
UniProtKBA0A0G3HWA4SubName: Full=DNA-binding response regulator in two-component regulatory system with BasS protein {ECO:0000313|EMBL:AKK16183.1};
InterProA0A0G3HWA4 
PFAMA0A0G3HWA4 
ProdomA0A0G3HWA4 
UniProtKBQ5MNC7RecName: Full=Transcriptional regulatory protein BasR;
InterProQ5MNC7 
PFAMQ5MNC7 
ProdomQ5MNC7 
UniProtKBQ5MNE0RecName: Full=Transcriptional regulatory protein BasR;
InterProQ5MNE0 
PFAMQ5MNE0 
ProdomQ5MNE0 
UniProtKBA0A8F8DF30SubName: Full=Two-component system response regulator BasR {ECO:0000313|EMBL:QXZ36603.1}
InterProA0A8F8DF30 
PFAMA0A8F8DF30 
ProdomA0A8F8DF30 
UniProtKBA0A8F9HAG8SubName: Full=Two-component system response regulator BasR {ECO:0000313|EMBL:QYE25383.1}
InterProA0A8F9HAG8 
PFAMA0A8F9HAG8 
ProdomA0A8F9HAG8 
UniProtKBB1XCZ6SubName: Full=DNA-binding response regulator in two-component regulatory system with BasS;
InterProB1XCZ6 
PFAMB1XCZ6 
ProdomB1XCZ6 
UniProtKBC9QU86SubName: Full=DNA-binding transcriptional regulator BasR;SubName: Full=Two component transcriptional regulator, winged helix family;
InterProC9QU86 
PFAMC9QU86 
ProdomC9QU86 
UniProtKBI0ZLW2SubName: Full=DNA-binding response regulator in two-component regulatory system with BasS;
InterProI0ZLW2 
PFAMI0ZLW2 
ProdomI0ZLW2 
UniProtKBC5A1A5SubName: Full=DNA-binding response regulator in two-component regulatory system with BasS;
InterProC5A1A5 
PFAMC5A1A5 
ProdomC5A1A5 
UniProtKBE8Y4P3SubName: Full=DNA-binding transcriptional regulator BasR;SubName: Full=Two component transcriptional regulator, winged helix family;
InterProE8Y4P3 
PFAME8Y4P3 
ProdomE8Y4P3 
UniProtKBQ2M6J1DNA-binding response regulator in two-component regulatory system withDE BasS
InterProQ2M6J1 
PFAMQ2M6J1 
ProdomQ2M6J1 
UniProtKBF9R5Z9SubName: Full=DNA-binding transcriptional regulator BasR;
InterProF9R5Z9 
PFAMF9R5Z9 
ProdomF9R5Z9 
UniProtKBG2F210SubName: Full=DNA-binding transcriptional regulator BasR;
InterProG2F210 
PFAMG2F210 
ProdomG2F210 
UniProtKBH0QFX5SubName: Full=DNA-binding response regulator in two-component regulatory system with BasS;
InterProH0QFX5 
PFAMH0QFX5 
ProdomH0QFX5 
UniProtKBA0A5Q3TGE7SubName: Full=Two-component system response regulator BasR {ECO:0000313|EMBL:QGL43261.1}
InterProA0A5Q3TGE7 
PFAMA0A5Q3TGE7 
ProdomA0A5Q3TGE7 
UniProtKBQ5MNH0RecName: Full=Transcriptional regulatory protein BasR;
InterProQ5MNH0 
PFAMQ5MNH0 
ProdomQ5MNH0 
UniProtKBQ5MNE0RecName: Full=Transcriptional regulatory protein BasR;
InterProQ5MNE0 
PFAMQ5MNE0 
ProdomQ5MNE0 
UniProtKBQ2M6J1RecName: Full=Transcriptional regulatory protein BasR;
InterProQ2M6J1 
PFAMQ2M6J1 
ProdomQ2M6J1 
UniProtKBQ5MNF2RecName: Full=Transcriptional regulatory protein BasR;
InterProQ5MNF2 
PFAMQ5MNF2 
ProdomQ5MNF2 
UniProtKBP30843.3BASR_ECOLI RecName: Full=Transcriptional regulatory protein BasR
InterProP30843.3 
PFAMP30843.3 
ProdomP30843.3 
UniProtKBQ5MNC7RecName: Full=Transcriptional regulatory protein BasR;
InterProQ5MNC7 
PFAMQ5MNC7 
ProdomQ5MNC7 
UniProtKBQ5MNE5RecName: Full=Transcriptional regulatory protein BasR;
InterProQ5MNE5 
PFAMQ5MNE5 
ProdomQ5MNE5 
UniProtKBP30843RecName: Full=Transcriptional regulatory protein BasR;
InterProP30843 
PFAMP30843 
ProdomP30843 
UniProtKBQ5MNC9RecName: Full=Transcriptional regulatory protein BasR;
InterProQ5MNC9 
PFAMQ5MNC9 
ProdomQ5MNC9 
RefSeqZP_07565126.1 two component transcriptional regulator, winged helix family [Escherichia coli KO11]
RefSeqNP_418537.1 DNA-binding response regulator in two-component regulatory system with BasS [Escherichia coli str. K-12 substr. MG1655]
RefSeqYP_001732885.1 DNA-binding response regulator in two-component regulatory system with BasS [Escherichia coli str. K-12 substr. DH10B]
RefSeqYP_002929017.1 DNA-binding response regulator in two-component regulatory system with BasS [Escherichia coli BW2952]
RefSeqAP_004614.1 DNA-binding response regulator in two-component regulatory system with BasS [Escherichia coli str. K-12 substr. W3110]
GenPept899729315transcriptional regulator
GenPept899733824transcriptional regulator
GenPept932857636Transcriptional regulatory protein basR/pmrA
GenPept808711620transcriptional regulator
GenPept306873560 two component transcriptional regulator, winged helix family [Escherichia coli KO11]
GenPept899724963transcriptional regulator
GenPept1360982S56341 basR protein - Escherichia coli
GenPept323380500two component transcriptional regulator, winged helix family
GenPept34395951BASR_ECOLI RecName: Full=Transcriptional regulatory protein BasR
GenPept359334221DNA-binding response regulator in two-component regulatory system with BasS
GenPept383390388DNA-binding transcriptional regulator BasR
GenPept536957basR
GenPept544204463transcriptional regulator
GenPept549815406DNA-binding response regulator in two-component regulatory system with BasS
GenPept550847110Sequence 106241 from patent US 8541208
GenPept550847605Sequence 107210 from patent US 8541208
GenPept557274273DNA-binding transcriptional regulator BasR
GenPept315138669DNA-binding transcriptional regulator BasR
GenPept307284973 two component transcriptional regulator, winged helix family [Escherichia coli KO11]
GenPept169891400DNA-binding response regulator in two-component regulatory system with BasS
GenPept170083565 DNA-binding response regulator in two-component regulatory system with BasS [Escherichia coli str. K-12 substr. DH10B]
GenPept1790552response regulator in two-component regulatory system with BasS
GenPept238860857DNA-binding response regulator in two-component regulatory system with BasS
GenPept238903221 DNA-binding response regulator in two-component regulatory system with BasS [Escherichia coli BW2952]
GenPept259685638unnamed protein product
GenPept259686804unnamed protein product
GenPept260451058two component transcriptional regulator, winged helix family
GenPept300598081unnamed protein product
GenPept300599015unnamed protein product
GenPept664686414transcriptional regulator
GenPept682121474response regulator in two-component regulatory system with BasS
GenPept687674873BasR transcriptional regulator
GenPept808728727transcriptional regulator
GenPept808733084transcriptional regulator
GenPept817577248response regulator in two-component regulatory system with BasS
GenPept817581389response regulator in two-component regulatory system with BasS
GenPept817585529response regulator in two-component regulatory system with BasS
GenPept817589670response regulator in two-component regulatory system with BasS
GenPept817593809response regulator in two-component regulatory system with BasS
GenPept827618228DNA-binding response regulator in two-component regulatory system with BasS protein
GenPept827620449DNA-binding response regulator in two-component regulatory system with BasS protein
GenPept85676865DNA-binding response regulator in two-component regulatory system with BasS
GenPept808720404transcriptional regulator
GenPept808715980transcriptional regulator
GenPept687679181BasR transcriptional regulator
GenPept730585317DNA-binding response regulator in two-component regulatory system with BasS
GenPept731473045DNA-binding response regulator in two-component regulatory system with BasS
GenPept732686314transcriptional regulator
GenPept7429066H65220 transcription regulator BasR/PmrA - Escherichia coli (strain K-12)
GenPept756351639PmrA protein
GenPept802137365DNA-binding response regulator in two-component regulatory system with BasS
GenPept808698510transcriptional regulator
GenPept808702891transcriptional regulator
GenPept808707261transcriptional regulator