University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A0A029L3C2
Original Database ID sp P30864
Organism Escherichia coli, Shigella boydii, etc.
Annotation subname: full=uncharacterized
protein {eco:0000313|embl:ezj79980.1};
Sequence Length 304

Dataset Information:

The newest dataset for this sequence was created on 2018-08-21. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region90-296
Protein Length304
Template PDB Code2y7pA
Template Region94-301
Sequence Identity12%
E-Value0
GA3410.6
MPQS0.849921
z-DOPE-0.13
TSVMod MethodMSALL
TSVMod RMSD6.82
TSVMod NO350.504
DatasetMW-Noddd2
ModPipe VersionSVN.r1620
Model Date2018-08-21

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2y7p
DBALI2y7pA 
JenaImageLibrary2y7p 
Target Sequence
UniProtKBH0Q764SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProH0Q764 
PFAMH0Q764 
ProdomH0Q764 
UniProtKBA0A073GZV0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEJ71308.1};
InterProA0A073GZV0 
PFAMA0A073GZV0 
ProdomA0A073GZV0 
UniProtKBA0A073TBJ1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEL23725.1};
InterProA0A073TBJ1 
PFAMA0A073TBJ1 
ProdomA0A073TBJ1 
UniProtKBA0A079GPC9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY94119.1};
InterProA0A079GPC9 
PFAMA0A079GPC9 
ProdomA0A079GPC9 
UniProtKBA0A080GYQ7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN92820.1};
InterProA0A080GYQ7 
PFAMA0A080GYQ7 
ProdomA0A080GYQ7 
UniProtKBA0A0E3H280SubName: Full=Putative HTH-type transcriptional regulator YafC {ECO:0000313|EMBL:AKA89201.1};
InterProA0A0E3H280 
PFAMA0A0E3H280 
ProdomA0A0E3H280 
UniProtKBA0A0G3HKF0SubName: Full=Putative DNA-binding transcriptional regulator protein {ECO:0000313|EMBL:AKK13799.1};
InterProA0A0G3HKF0 
PFAMA0A0G3HKF0 
ProdomA0A0G3HKF0 
UniProtKBI2I568SubName: Full=LysR family transcriptional regulator;
InterProI2I568 
PFAMI2I568 
ProdomI2I568 
UniProtKBI2ZMZ0SubName: Full=LysR substrate binding domain protein;
InterProI2ZMZ0 
PFAMI2ZMZ0 
ProdomI2ZMZ0 
UniProtKBI2YFC4SubName: Full=LysR substrate binding domain protein;
InterProI2YFC4 
PFAMI2YFC4 
ProdomI2YFC4 
UniProtKBK3IDP8SubName: Full=Uncharacterized protein;
InterProK3IDP8 
PFAMK3IDP8 
ProdomK3IDP8 
UniProtKBA0A071C7F3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDZ11513.1};
InterProA0A071C7F3 
PFAMA0A071C7F3 
ProdomA0A071C7F3 
UniProtKBA0A071BT23SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY84110.1};
InterProA0A071BT23 
PFAMA0A071BT23 
ProdomA0A071BT23 
UniProtKBH5N4K2SubName: Full=DNA-binding transcriptional regulator LYSR-type;
InterProH5N4K2 
PFAMH5N4K2 
ProdomH5N4K2 
UniProtKBM8R9S8SubName: Full=Uncharacterized protein;
InterProM8R9S8 
PFAMM8R9S8 
ProdomM8R9S8 
UniProtKBM8XAY5SubName: Full=Uncharacterized protein;
InterProM8XAY5 
PFAMM8XAY5 
ProdomM8XAY5 
UniProtKBH4UVC0SubName: Full=DNA-binding transcriptional regulator LYSR-type {ECO:0000313|EMBL:EHV65031.1};
InterProH4UVC0 
PFAMH4UVC0 
ProdomH4UVC0 
UniProtKBH4W5Z7SubName: Full=DNA-binding transcriptional regulator LYSR-type;
InterProH4W5Z7 
PFAMH4W5Z7 
ProdomH4W5Z7 
UniProtKBM8VGA0SubName: Full=Uncharacterized protein;
InterProM8VGA0 
PFAMM8VGA0 
ProdomM8VGA0 
UniProtKBM8ZDC4SubName: Full=Uncharacterized protein;
InterProM8ZDC4 
PFAMM8ZDC4 
ProdomM8ZDC4 
UniProtKBH5F9Y0SubName: Full=DNA-binding transcriptional regulator LYSR-type;
InterProH5F9Y0 
PFAMH5F9Y0 
ProdomH5F9Y0 
UniProtKBM9AEW5SubName: Full=Uncharacterized protein;
InterProM9AEW5 
PFAMM9AEW5 
ProdomM9AEW5 
UniProtKBH5L2Z7SubName: Full=DNA-binding transcriptional regulator LYSR-type;
InterProH5L2Z7 
PFAMH5L2Z7 
ProdomH5L2Z7 
UniProtKBH5LGT3SubName: Full=DNA-binding transcriptional regulator LYSR-type;
InterProH5LGT3 
PFAMH5LGT3 
ProdomH5LGT3 
UniProtKBI2Y411SubName: Full=LysR substrate binding domain protein;
InterProI2Y411 
PFAMI2Y411 
ProdomI2Y411 
UniProtKBI0ZLW9SubName: Full=LysR substrate binding domain protein;
InterProI0ZLW9 
PFAMI0ZLW9 
ProdomI0ZLW9 
UniProtKBE1IY53SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EFO55725.1};
InterProE1IY53 
PFAME1IY53 
ProdomE1IY53 
UniProtKBL4FJY6SubName: Full=Transcriptional regulator;
InterProL4FJY6 
PFAML4FJY6 
ProdomL4FJY6 
UniProtKBL3W1K3SubName: Full=Transcriptional regulator;
InterProL3W1K3 
PFAML3W1K3 
ProdomL3W1K3 
UniProtKBK5G9Q9SubName: Full=Uncharacterized protein;
InterProK5G9Q9 
PFAMK5G9Q9 
ProdomK5G9Q9 
UniProtKBF4SFK7SubName: Full=Putative transcriptional regulator LYSR-type {ECO:0000313|EMBL:EGI12240.1};
InterProF4SFK7 
PFAMF4SFK7 
ProdomF4SFK7 
UniProtKBG0FAW8SubName: Full=Uncharacterized HTH-type transcriptional regulator yafC {ECO:0000313|EMBL:AEJ54862.1};
InterProG0FAW8 
PFAMG0FAW8 
ProdomG0FAW8 
UniProtKBM7WGC1SubName: Full=Putative DNA-binding transcriptional regulator;
InterProM7WGC1 
PFAMM7WGC1 
ProdomM7WGC1 
UniProtKBM2P4X6SubName: Full=LysR family transcriptional regulator;
InterProM2P4X6 
PFAMM2P4X6 
ProdomM2P4X6 
UniProtKBG2APX9SubName: Full=Putative uncharacterized protein;
InterProG2APX9 
PFAMG2APX9 
ProdomG2APX9 
UniProtKBM8TJY7SubName: Full=Uncharacterized protein;
InterProM8TJY7 
PFAMM8TJY7 
ProdomM8TJY7 
UniProtKBL4JWH8SubName: Full=Transcriptional regulator;
InterProL4JWH8 
PFAML4JWH8 
ProdomL4JWH8 
UniProtKBL4N4Y8SubName: Full=Transcriptional regulator;
InterProL4N4Y8 
PFAML4N4Y8 
ProdomL4N4Y8 
UniProtKBD8EUM6SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EFK48642.1};
InterProD8EUM6 
PFAMD8EUM6 
ProdomD8EUM6 
UniProtKBL2VC61SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:ELC12035.1};
InterProL2VC61 
PFAML2VC61 
ProdomL2VC61 
UniProtKBL2ZJR2SubName: Full=Transcriptional regulator;
InterProL2ZJR2 
PFAML2ZJR2 
ProdomL2ZJR2 
UniProtKBH5MB15SubName: Full=DNA-binding transcriptional regulator LYSR-type;
InterProH5MB15 
PFAMH5MB15 
ProdomH5MB15 
UniProtKBL3USF7SubName: Full=Transcriptional regulator;
InterProL3USF7 
PFAML3USF7 
ProdomL3USF7 
UniProtKBL3RSD1SubName: Full=Transcriptional regulator;
InterProL3RSD1 
PFAML3RSD1 
ProdomL3RSD1 
UniProtKBB3HDH4SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:AIF61998.1};
InterProB3HDH4 
PFAMB3HDH4 
ProdomB3HDH4 
UniProtKBL3R0K9SubName: Full=Transcriptional regulator;
InterProL3R0K9 
PFAML3R0K9 
ProdomL3R0K9 
UniProtKBC9QRI6SubName: Full=Putative DNA-binding transcriptional regulator;SubName: Full=Transcriptional regulator, LysR family;
InterProC9QRI6 
PFAMC9QRI6 
ProdomC9QRI6 
UniProtKBL3XA54SubName: Full=Transcriptional regulator;
InterProL3XA54 
PFAML3XA54 
ProdomL3XA54 
UniProtKBD8B7W8SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EFJ64787.1};
InterProD8B7W8 
PFAMD8B7W8 
ProdomD8B7W8 
UniProtKBG2CFJ5SubName: Full=Putative uncharacterized protein;
InterProG2CFJ5 
PFAMG2CFJ5 
ProdomG2CFJ5 
UniProtKBM8SQM2SubName: Full=Uncharacterized protein;
InterProM8SQM2 
PFAMM8SQM2 
ProdomM8SQM2 
UniProtKBA0A029L3C2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZJ79980.1};
InterProA0A029L3C2 
PFAMA0A029L3C2 
ProdomA0A029L3C2 
UniProtKBH4VRU3SubName: Full=Uncharacterized protein;
InterProH4VRU3 
PFAMH4VRU3 
ProdomH4VRU3 
UniProtKBA0A070UKA9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX42742.1};
InterProA0A070UKA9 
PFAMA0A070UKA9 
ProdomA0A070UKA9 
UniProtKBA0A074I6V0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO02658.1};
InterProA0A074I6V0 
PFAMA0A074I6V0 
ProdomA0A074I6V0 
UniProtKBI2XG00SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EII47920.1};
InterProI2XG00 
PFAMI2XG00 
ProdomI2XG00 
UniProtKBK3JS97SubName: Full=Uncharacterized protein;
InterProK3JS97 
PFAMK3JS97 
ProdomK3JS97 
UniProtKBL3L452SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:ELE05294.1};
InterProL3L452 
PFAML3L452 
ProdomL3L452 
UniProtKBL3VM84SubName: Full=Transcriptional regulator;
InterProL3VM84 
PFAML3VM84 
ProdomL3VM84 
UniProtKBD8C486SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EFI86276.1};
InterProD8C486 
PFAMD8C486 
ProdomD8C486 
UniProtKBL4PDY1SubName: Full=Transcriptional regulator;
InterProL4PDY1 
PFAML4PDY1 
ProdomL4PDY1 
UniProtKBF9R4I7SubName: Full=LysR family transcriptional regulator;
InterProF9R4I7 
PFAMF9R4I7 
ProdomF9R4I7 
UniProtKBG2F7A2SubName: Full=LysR family transcriptional regulator;
InterProG2F7A2 
PFAMG2F7A2 
ProdomG2F7A2 
UniProtKBL5IHU8SubName: Full=Transcriptional regulator;
InterProL5IHU8 
PFAML5IHU8 
ProdomL5IHU8 
UniProtKBA0A029N426SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZK04182.1};
InterProA0A029N426 
PFAMA0A029N426 
ProdomA0A029N426 
UniProtKBL4X526SubName: Full=Transcriptional regulator;
InterProL4X526 
PFAML4X526 
ProdomL4X526 
UniProtKBA0A069XJK3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU29949.1};
InterProA0A069XJK3 
PFAMA0A069XJK3 
ProdomA0A069XJK3 
UniProtKBK5GIU7SubName: Full=Uncharacterized protein;
InterProK5GIU7 
PFAMK5GIU7 
ProdomK5GIU7 
UniProtKBF8XDL3SubName: Full=Contact-regulated protein A {ECO:0000313|EMBL:EGU97124.1};
InterProF8XDL3 
PFAMF8XDL3 
ProdomF8XDL3 
UniProtKBM8X0M4SubName: Full=Uncharacterized protein;
InterProM8X0M4 
PFAMM8X0M4 
ProdomM8X0M4 
UniProtKBA0A069Z2U3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU51598.1};
InterProA0A069Z2U3 
PFAMA0A069Z2U3 
ProdomA0A069Z2U3 
UniProtKBI2R6N7SubName: Full=Uncharacterized protein;
InterProI2R6N7 
PFAMI2R6N7 
ProdomI2R6N7 
UniProtKBL3F7B6SubName: Full=Transcriptional regulator;
InterProL3F7B6 
PFAML3F7B6 
ProdomL3F7B6 
UniProtKBL4FJ36SubName: Full=Transcriptional regulator;
InterProL4FJ36 
PFAML4FJ36 
ProdomL4FJ36 
UniProtKBL8BVC8SubName: Full=LysR family transcriptional regulator YafC;
InterProL8BVC8 
PFAML8BVC8 
ProdomL8BVC8 
UniProtKBM8UDA4SubName: Full=Uncharacterized protein;
InterProM8UDA4 
PFAMM8UDA4 
ProdomM8UDA4 
UniProtKBH4UEG8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EHV63070.1};
InterProH4UEG8 
PFAMH4UEG8 
ProdomH4UEG8 
UniProtKBA7ZHU4SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABV16796.1};
InterProA7ZHU4 
PFAMA7ZHU4 
ProdomA7ZHU4 
UniProtKBB1XD72SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProB1XD72 
PFAMB1XD72 
ProdomB1XD72 
UniProtKBC4ZRU5SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProC4ZRU5 
PFAMC4ZRU5 
ProdomC4ZRU5 
UniProtKBD8APU2SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EFK14863.1};
InterProD8APU2 
PFAMD8APU2 
ProdomD8APU2 
UniProtKBL4A799SubName: Full=Transcriptional regulator;
InterProL4A799 
PFAML4A799 
ProdomL4A799 
UniProtKBE1HM01SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EFK91072.1};
InterProE1HM01 
PFAME1HM01 
ProdomE1HM01 
UniProtKBE7UHL3SubName: Full=Transcriptional regulator LysR family, yafC;
InterProE7UHL3 
PFAME7UHL3 
ProdomE7UHL3 
UniProtKBE9WP55SubName: Full=LysR substrate binding domain-containing protein;
InterProE9WP55 
PFAME9WP55 
ProdomE9WP55 
UniProtKBL5GJG1SubName: Full=Transcriptional regulator;
InterProL5GJG1 
PFAML5GJG1 
ProdomL5GJG1 
UniProtKBG1ZEB8SubName: Full=Putative uncharacterized protein;
InterProG1ZEB8 
PFAMG1ZEB8 
ProdomG1ZEB8 
UniProtKBH5NKL2SubName: Full=DNA-binding transcriptional regulator LYSR-type;
InterProH5NKL2 
PFAMH5NKL2 
ProdomH5NKL2 
UniProtKBI4T9M4SubName: Full=Putative DNA-binding transcriptional regulator;
InterProI4T9M4 
PFAMI4T9M4 
ProdomI4T9M4 
UniProtKBI4JD07SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIF87116.1};
InterProI4JD07 
PFAMI4JD07 
ProdomI4JD07 
UniProtKBM8YUF3SubName: Full=Uncharacterized protein;
InterProM8YUF3 
PFAMM8YUF3 
ProdomM8YUF3 
UniProtKBH4X0Y3SubName: Full=DNA-binding transcriptional regulator LYSR-type;
InterProH4X0Y3 
PFAMH4X0Y3 
ProdomH4X0Y3 
UniProtKBH5KQE7SubName: Full=DNA-binding transcriptional regulator LYSR-type;
InterProH5KQE7 
PFAMH5KQE7 
ProdomH5KQE7 
UniProtKBM8UGT7SubName: Full=Uncharacterized protein;
InterProM8UGT7 
PFAMM8UGT7 
ProdomM8UGT7 
UniProtKBA0A070XWH9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX83015.1};
InterProA0A070XWH9 
PFAMA0A070XWH9 
ProdomA0A070XWH9 
UniProtKBA0A071D592SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDZ35636.1};
InterProA0A071D592 
PFAMA0A071D592 
ProdomA0A071D592 
UniProtKBA0A074INP7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO16616.1};
InterProA0A074INP7 
PFAMA0A074INP7 
ProdomA0A074INP7 
UniProtKBA0A080IH53SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO29119.1};
InterProA0A080IH53 
PFAMA0A080IH53 
ProdomA0A080IH53 
UniProtKBI2PUN1SubName: Full=Uncharacterized protein;
InterProI2PUN1 
PFAMI2PUN1 
ProdomI2PUN1 
UniProtKBG2B524SubName: Full=Putative uncharacterized protein;
InterProG2B524 
PFAMG2B524 
ProdomG2B524